Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21244073
Identifier: 21244073
GI number: 21244073
Start: 3944843
End: 3946255
Strand: Reverse
Name: 21244073
Synonym: XAC3349
Alternate gene names: NA
Gene position: 3946255-3944843 (Counterclockwise)
Preceding gene: 21244074
Following gene: 21244072
Centisome position: 76.25
GC content: 69.29
Gene sequence:
>1413_bases GTGCGGTTGCGACCGAAGGTCATGCTGTCCAAGAGAACGGCGTCGAAAAGGATCGGGAATGAAAGCGATGCGATGGGCGC TGCTGCTGATGGTGCCGATGTTGGCGCAGGCCAGCGATGTGCGGCAGGACTACCGCCAGCAGTGGCCGCTGCAGATGACC GGCTCGGATGCCGGCCTCTATCAGGTGACCTTGAATGCGGCGGTGTATCGCGCCGCGCACGACGCGGCGCTGCGCGATGT CACGGTGATCGACGCGCATGGACAAGAGCTGCCCACCGCCTGGCTGCCGATGGATGCAGCGCCGGCTGCTGCGGTACGCC GTCAGCGCCTGCCCCTGTTTGCGCTACCGGCTGGTGCGGCGCCGGCCAGTGGCGACCTGCAGTTGATTGCCGAGCGCGAT GCCAGTGGTGCGGTGCGCCGCCTGGAAGGCCGCTTTGCGACCGGGGCTGTCGCGGCGGGCCACGGTGTCAGCTGGTTGAT CGATGCCAGCGCGCTGCGCGATCGCCCGCGTGCCCTGTTGCTGGATTGGGAGGGCGACATGCCGGTGCAGGCCCAGGTGC GCGTGGAAGGCAGCGACGATCTGCGCGACTGGCGCGTGCTCGCCTCCAACGCCACGGTCATGGCGCTGGACAATCAGGCG CAGCGACTGCAGCAGCGTCGTATCGCCCTGGACGATGGTGCGCGTTACTTGCGCCTGGTCACTGCATCGGGCGAGCTGCC GGCATTGCGCGTGGTCGAGGCGGAGCTGGATGGCATCGCCATGTCCACGCCGCAACAGTGGCTGGACTTGCCAGGCACCG CAAAAGATGCAGCGCTGGTGTATGCCTTGCCCGGTCGTTTTCCGATCAGCCAACTGGATGTCGGCGGCAGTCAGGCCGAG GCGGTCGAGTGGATCGTGGCAAGTCGCGATACCGACGATGCGCCGTGGCTGCAGCGTGCCGGCCCATGGTTGGCGTATCG CTGGGCCAGGGCACGGCCGCCGCGTCGCCGCCGCAACTGCTGTCTGCGCCCGTGCGCGATCGCCAATGGCGGTTGGTCGC CGCGCAGGGGCGCAGCACCGCCGTGCCGATGCTGCGCGTCGGGTACCAGCCGGAGCGGCTGATGTTTCTTGCGCAGGGCC AGCCGCCGTATGCGCTGGTGGCCGGCAGTGCGCGTGCGCAGCGCACCGACGCACCATTGGGCGCAATGCTGCAGGCACTG CGGCGCGAACGCGGCGCACAGTGGCAGCCGGCGCAGGCCCGTCTGGCTGCGCAGGCACAGCCGCTGGCAGGCGAGGCCGC GCTGCAGCCGGCTGCCACGCCGCGCGACTGGAAGCGTTGGCTGCTGTGGGGGCTGTTGGTCGGTGGCGCCTTGCTGGTAG GCGGTTTCGCGGTGAGCCTATTGCGTAGTGCGTCGGCCGATCGCAACGGCTGA
Upstream 100 bases:
>100_bases GTCGACCGCCAGCATCTGGGCAACTTACTCGGCATCGGCTCGTTCATGGCCTATGGCCTGTTGTGCACCGTGGTGGGCTA TCTGGCGCCGGCACCGCCGC
Downstream 100 bases:
>100_bases CTGCGACCGCTTCGCACGGCGGTTTGCCGCTGCGGCGCGAAGGTCGGACAATGGGCGTCCCCCGTGACCAAGGCAGCCGT CTTGCCCGTCGTGTTCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MRLRPKVMLSKRTASKRIGNESDAMGAAADGADVGAGQRCAAGLPPAVAAADDRLGCRPLSGDLECGGVSRRARRGAARC HGDRRAWTRAAHRLAADGCSAGCCGTPSAPAPVCATGWCGAGQWRPAVDCRARCQWCGAPPGRPLCDRGCRGGPRCQLVD RCQRAARSPACPVAGLGGRHAGAGPGARGRQRRSARLARARLQRHGHGAGQSGAATAAASYRPGRWCALLAPGHCIGRAA GIARGRGGAGWHRHVHAATVAGLARHRKRCSAGVCLARSFSDQPTGCRRQSGRGGRVDRGKSRYRRCAVAAACRPMVGVS LGQGTAAASPPQLLSAPVRDRQWRLVAAQGRSTAVPMLRVGYQPERLMFLAQGQPPYALVAGSARAQRTDAPLGAMLQAL RRERGAQWQPAQARLAAQAQPLAGEAALQPAATPRDWKRWLLWGLLVGGALLVGGFAVSLLRSASADRNG
Sequences:
>Translated_470_residues MRLRPKVMLSKRTASKRIGNESDAMGAAADGADVGAGQRCAAGLPPAVAAADDRLGCRPLSGDLECGGVSRRARRGAARC HGDRRAWTRAAHRLAADGCSAGCCGTPSAPAPVCATGWCGAGQWRPAVDCRARCQWCGAPPGRPLCDRGCRGGPRCQLVD RCQRAARSPACPVAGLGGRHAGAGPGARGRQRRSARLARARLQRHGHGAGQSGAATAAASYRPGRWCALLAPGHCIGRAA GIARGRGGAGWHRHVHAATVAGLARHRKRCSAGVCLARSFSDQPTGCRRQSGRGGRVDRGKSRYRRCAVAAACRPMVGVS LGQGTAAASPPQLLSAPVRDRQWRLVAAQGRSTAVPMLRVGYQPERLMFLAQGQPPYALVAGSARAQRTDAPLGAMLQAL RRERGAQWQPAQARLAAQAQPLAGEAALQPAATPRDWKRWLLWGLLVGGALLVGGFAVSLLRSASADRNG >Mature_470_residues MRLRPKVMLSKRTASKRIGNESDAMGAAADGADVGAGQRCAAGLPPAVAAADDRLGCRPLSGDLECGGVSRRARRGAARC HGDRRAWTRAAHRLAADGCSAGCCGTPSAPAPVCATGWCGAGQWRPAVDCRARCQWCGAPPGRPLCDRGCRGGPRCQLVD RCQRAARSPACPVAGLGGRHAGAGPGARGRQRRSARLARARLQRHGHGAGQSGAATAAASYRPGRWCALLAPGHCIGRAA GIARGRGGAGWHRHVHAATVAGLARHRKRCSAGVCLARSFSDQPTGCRRQSGRGGRVDRGKSRYRRCAVAAACRPMVGVS LGQGTAAASPPQLLSAPVRDRQWRLVAAQGRSTAVPMLRVGYQPERLMFLAQGQPPYALVAGSARAQRTDAPLGAMLQAL RRERGAQWQPAQARLAAQAQPLAGEAALQPAATPRDWKRWLLWGLLVGGALLVGGFAVSLLRSASADRNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48971; Mature: 48971
Theoretical pI: Translated: 12.08; Mature: 12.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRPKVMLSKRTASKRIGNESDAMGAAADGADVGAGQRCAAGLPPAVAAADDRLGCRPL CCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCHHHCCCCCHHHCCCCCCCCCCC SGDLECGGVSRRARRGAARCHGDRRAWTRAAHRLAADGCSAGCCGTPSAPAPVCATGWCG CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCC AGQWRPAVDCRARCQWCGAPPGRPLCDRGCRGGPRCQLVDRCQRAARSPACPVAGLGGRH CCCCCCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC AGAGPGARGRQRRSARLARARLQRHGHGAGQSGAATAAASYRPGRWCALLAPGHCIGRAA CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCEEEEECCCHHHHHHH GIARGRGGAGWHRHVHAATVAGLARHRKRCSAGVCLARSFSDQPTGCRRQSGRGGRVDRG HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCH KSRYRRCAVAAACRPMVGVSLGQGTAAASPPQLLSAPVRDRQWRLVAAQGRSTAVPMLRV HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCHHHC GYQPERLMFLAQGQPPYALVAGSARAQRTDAPLGAMLQALRRERGAQWQPAQARLAAQAQ CCCCCCEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCC PLAGEAALQPAATPRDWKRWLLWGLLVGGALLVGGFAVSLLRSASADRNG CCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRLRPKVMLSKRTASKRIGNESDAMGAAADGADVGAGQRCAAGLPPAVAAADDRLGCRPL CCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCHHHCCCCCHHHCCCCCCCCCCC SGDLECGGVSRRARRGAARCHGDRRAWTRAAHRLAADGCSAGCCGTPSAPAPVCATGWCG CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCC AGQWRPAVDCRARCQWCGAPPGRPLCDRGCRGGPRCQLVDRCQRAARSPACPVAGLGGRH CCCCCCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC AGAGPGARGRQRRSARLARARLQRHGHGAGQSGAATAAASYRPGRWCALLAPGHCIGRAA CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCEEEEECCCHHHHHHH GIARGRGGAGWHRHVHAATVAGLARHRKRCSAGVCLARSFSDQPTGCRRQSGRGGRVDRG HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCH KSRYRRCAVAAACRPMVGVSLGQGTAAASPPQLLSAPVRDRQWRLVAAQGRSTAVPMLRV HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCHHHC GYQPERLMFLAQGQPPYALVAGSARAQRTDAPLGAMLQALRRERGAQWQPAQARLAAQAQ CCCCCCEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCC PLAGEAALQPAATPRDWKRWLLWGLLVGGALLVGGFAVSLLRSASADRNG CCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA