Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
---|---|
Accession | NC_003919 |
Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21244074
Identifier: 21244074
GI number: 21244074
Start: 3945154
End: 3946197
Strand: Reverse
Name: 21244074
Synonym: XAC3348
Alternate gene names: NA
Gene position: 3946197-3945154 (Counterclockwise)
Preceding gene: 21244075
Following gene: 21244073
Centisome position: 76.25
GC content: 69.16
Gene sequence:
>1044_bases ATGAAAGCGATGCGATGGGCGCTGCTGCTGATGGTGCCGATGTTGGCGCAGGCCAGCGATGTGCGGCAGGACTACCGCCA GCAGTGGCCGCTGCAGATGACCGGCTCGGATGCCGGCCTCTATCAGGTGACCTTGAATGCGGCGGTGTATCGCGCCGCGC ACGACGCGGCGCTGCGCGATGTCACGGTGATCGACGCGCATGGACAAGAGCTGCCCACCGCCTGGCTGCCGATGGATGCA GCGCCGGCTGCTGCGGTACGCCGTCAGCGCCTGCCCCTGTTTGCGCTACCGGCTGGTGCGGCGCCGGCCAGTGGCGACCT GCAGTTGATTGCCGAGCGCGATGCCAGTGGTGCGGTGCGCCGCCTGGAAGGCCGCTTTGCGACCGGGGCTGTCGCGGCGG GCCACGGTGTCAGCTGGTTGATCGATGCCAGCGCGCTGCGCGATCGCCCGCGTGCCCTGTTGCTGGATTGGGAGGGCGAC ATGCCGGTGCAGGCCCAGGTGCGCGTGGAAGGCAGCGACGATCTGCGCGACTGGCGCGTGCTCGCCTCCAACGCCACGGT CATGGCGCTGGACAATCAGGCGCAGCGACTGCAGCAGCGTCGTATCGCCCTGGACGATGGTGCGCGTTACTTGCGCCTGG TCACTGCATCGGGCGAGCTGCCGGCATTGCGCGTGGTCGAGGCGGAGCTGGATGGCATCGCCATGTCCACGCCGCAACAG TGGCTGGACTTGCCAGGCACCGCAAAAGATGCAGCGCTGGTGTATGCCTTGCCCGGTCGTTTTCCGATCAGCCAACTGGA TGTCGGCGGCAGTCAGGCCGAGGCGGTCGAGTGGATCGTGGCAAGTCGCGATACCGACGATGCGCCGTGGCTGCAGCGTG CCGGCCCATGGTTGGCGTATCGCTGGGCCAGGGCACGGCCGCCGCGTCGCCGCCGCAACTGCTGTCTGCGCCCGTGCGCG ATCGCCAATGGCGGTTGGTCGCCGCGCAGGGGCGCAGCACCGCCGTGCCGATGCTGCGCGTCGGGTACCAGCCGGAGCGG CTGA
Upstream 100 bases:
>100_bases TGTTGTGCACCGTGGTGGGCTATCTGGCGCCGGCACCGCCGCGTGCGGTTGCGACCGAAGGTCATGCTGTCCAAGAGAAC GGCGTCGAAAAGGATCGGGA
Downstream 100 bases:
>100_bases TGTTTCTTGCGCAGGGCCAGCCGCCGTATGCGCTGGTGGCCGGCAGTGCGCGTGCGCAGCGCACCGACGCACCATTGGGC GCAATGCTGCAGGCACTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MKAMRWALLLMVPMLAQASDVRQDYRQQWPLQMTGSDAGLYQVTLNAAVYRAAHDAALRDVTVIDAHGQELPTAWLPMDA APAAAVRRQRLPLFALPAGAAPASGDLQLIAERDASGAVRRLEGRFATGAVAAGHGVSWLIDASALRDRPRALLLDWEGD MPVQAQVRVEGSDDLRDWRVLASNATVMALDNQAQRLQQRRIALDDGARYLRLVTASGELPALRVVEAELDGIAMSTPQQ WLDLPGTAKDAALVYALPGRFPISQLDVGGSQAEAVEWIVASRDTDDAPWLQRAGPWLAYRWARARPPRRRRNCCLRPCA IANGGWSPRRGAAPPCRCCASGTSRSG
Sequences:
>Translated_347_residues MKAMRWALLLMVPMLAQASDVRQDYRQQWPLQMTGSDAGLYQVTLNAAVYRAAHDAALRDVTVIDAHGQELPTAWLPMDA APAAAVRRQRLPLFALPAGAAPASGDLQLIAERDASGAVRRLEGRFATGAVAAGHGVSWLIDASALRDRPRALLLDWEGD MPVQAQVRVEGSDDLRDWRVLASNATVMALDNQAQRLQQRRIALDDGARYLRLVTASGELPALRVVEAELDGIAMSTPQQ WLDLPGTAKDAALVYALPGRFPISQLDVGGSQAEAVEWIVASRDTDDAPWLQRAGPWLAYRWARARPPRRRRNCCLRPCA IANGGWSPRRGAAPPCRCCASGTSRSG >Mature_347_residues MKAMRWALLLMVPMLAQASDVRQDYRQQWPLQMTGSDAGLYQVTLNAAVYRAAHDAALRDVTVIDAHGQELPTAWLPMDA APAAAVRRQRLPLFALPAGAAPASGDLQLIAERDASGAVRRLEGRFATGAVAAGHGVSWLIDASALRDRPRALLLDWEGD MPVQAQVRVEGSDDLRDWRVLASNATVMALDNQAQRLQQRRIALDDGARYLRLVTASGELPALRVVEAELDGIAMSTPQQ WLDLPGTAKDAALVYALPGRFPISQLDVGGSQAEAVEWIVASRDTDDAPWLQRAGPWLAYRWARARPPRRRRNCCLRPCA IANGGWSPRRGAAPPCRCCASGTSRSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37736; Mature: 37736
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAMRWALLLMVPMLAQASDVRQDYRQQWPLQMTGSDAGLYQVTLNAAVYRAAHDAALRD CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEHHHHHHHHHHHHHCE VTVIDAHGQELPTAWLPMDAAPAAAVRRQRLPLFALPAGAAPASGDLQLIAERDASGAVR EEEEECCCCCCCCEECCCCCCCHHHHHHHCCCEEEECCCCCCCCCCEEEEEECCCCHHHH RLEGRFATGAVAAGHGVSWLIDASALRDRPRALLLDWEGDMPVQAQVRVEGSDDLRDWRV HHCCCCCCCEEECCCCEEEEEECHHHCCCCCEEEEECCCCCCEEEEEEECCCCCCCHHEE LASNATVMALDNQAQRLQQRRIALDDGARYLRLVTASGELPALRVVEAELDGIAMSTPQQ EECCCEEEEECHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCEEECCCHH WLDLPGTAKDAALVYALPGRFPISQLDVGGSQAEAVEWIVASRDTDDAPWLQRAGPWLAY HHCCCCCCCCCEEEEEECCCCCHHHCCCCCCHHHHEEEEEECCCCCCCCHHHHCCCCEEE RWARARPPRRRRNCCLRPCAIANGGWSPRRGAAPPCRCCASGTSRSG EHHHCCCCHHHHCCCCCCCEECCCCCCCCCCCCCHHHHHCCCCCCCC >Mature Secondary Structure MKAMRWALLLMVPMLAQASDVRQDYRQQWPLQMTGSDAGLYQVTLNAAVYRAAHDAALRD CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEHHHHHHHHHHHHHCE VTVIDAHGQELPTAWLPMDAAPAAAVRRQRLPLFALPAGAAPASGDLQLIAERDASGAVR EEEEECCCCCCCCEECCCCCCCHHHHHHHCCCEEEECCCCCCCCCCEEEEEECCCCHHHH RLEGRFATGAVAAGHGVSWLIDASALRDRPRALLLDWEGDMPVQAQVRVEGSDDLRDWRV HHCCCCCCCEEECCCCEEEEEECHHHCCCCCEEEEECCCCCCEEEEEEECCCCCCCHHEE LASNATVMALDNQAQRLQQRRIALDDGARYLRLVTASGELPALRVVEAELDGIAMSTPQQ EECCCEEEEECHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCEEECCCHH WLDLPGTAKDAALVYALPGRFPISQLDVGGSQAEAVEWIVASRDTDDAPWLQRAGPWLAY HHCCCCCCCCCEEEEEECCCCCHHHCCCCCCHHHHEEEEEECCCCCCCCHHHHCCCCEEE RWARARPPRRRRNCCLRPCAIANGGWSPRRGAAPPCRCCASGTSRSG EHHHCCCCHHHHCCCCCCCEECCCCCCCCCCCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA