Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is pat [H]
Identifier: 21243039
GI number: 21243039
Start: 2693612
End: 2694151
Strand: Direct
Name: pat [H]
Synonym: XAC2304
Alternate gene names: 21243039
Gene position: 2693612-2694151 (Clockwise)
Preceding gene: 21243038
Following gene: 21243040
Centisome position: 52.04
GC content: 63.89
Gene sequence:
>540_bases ATGCCACTCGAGTTGCGTGCGGTCCGCAATGCGGACATTCCGGCGATCACTGCGATCTATGCGGAGCAGGTCGCCGGGGT CAATACCTACGAATACAGGGCGCCATCGCTCGATGAGATGCGCGCGCGGGTCAGCGCGATCGTGGATGCAGGCTACCCCT ATCTGGTCGCCGAGCTCGATGGCGTGGTCGCGGGCTACGCCTATGCAAGCGCATTTCGCGCGCGCGCCGGATATCGCTGG ACGGTGGAGAACTCGATCTACCTGTCCGCAGCGATGCAGGGCCGCGGCATCGGCAAAGCGCTGCTGGGCGAGCTGATCGC GGTGTGCGAGCAGCGCGGCTTCCGGCAGATGATTGCGGTGATTGGCGATGCCGGCAATCTGGCATCGCGACACTTGCATG AACGTTTTGGATTTCGCACGGTCGGAGTCTTCAACGGAATCGGCCGCAAACACGGCCGCTGGCTGGACGGCGTGCAGATG CAACGCGCGCTCGGCTCCGGCGACACCGCCCCTCCTCCTGATGAAAAGACCCATGACTGA
Upstream 100 bases:
>100_bases CCTGCAACGCAGCGAACATGTGCGCCGCATTTGGCCATTCCTGCGCGACCGTCGCATCGATGCGTACGGCGATCTGCTCA AGCGCTACATCGACTGACGC
Downstream 100 bases:
>100_bases GCAGCCCCCCCACGTTCTGGACGATGCGCTGTCCGGCCAGCCGCATCGCATCGTCGAACGCGACGGCGTGCGCTATACCT TGCTCGGCACCGCGCACGTG
Product: phosphinothricin N-acetyltransferase
Products: NA
Alternate protein names: PPT N-acetyltransferase; Phosphinothricin-resistance protein [H]
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MPLELRAVRNADIPAITAIYAEQVAGVNTYEYRAPSLDEMRARVSAIVDAGYPYLVAELDGVVAGYAYASAFRARAGYRW TVENSIYLSAAMQGRGIGKALLGELIAVCEQRGFRQMIAVIGDAGNLASRHLHERFGFRTVGVFNGIGRKHGRWLDGVQM QRALGSGDTAPPPDEKTHD
Sequences:
>Translated_179_residues MPLELRAVRNADIPAITAIYAEQVAGVNTYEYRAPSLDEMRARVSAIVDAGYPYLVAELDGVVAGYAYASAFRARAGYRW TVENSIYLSAAMQGRGIGKALLGELIAVCEQRGFRQMIAVIGDAGNLASRHLHERFGFRTVGVFNGIGRKHGRWLDGVQM QRALGSGDTAPPPDEKTHD >Mature_178_residues PLELRAVRNADIPAITAIYAEQVAGVNTYEYRAPSLDEMRARVSAIVDAGYPYLVAELDGVVAGYAYASAFRARAGYRWT VENSIYLSAAMQGRGIGKALLGELIAVCEQRGFRQMIAVIGDAGNLASRHLHERFGFRTVGVFNGIGRKHGRWLDGVQMQ RALGSGDTAPPPDEKTHD
Specific function: This enzyme is an effector of phosphinothricin tripeptide (PTT or bialaphos) resistance. Inactivates PTT by transfer of an acetyl group [H]
COG id: COG1247
COG function: function code M; Sortase and related acyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1787719, Length=173, Percent_Identity=38.150289017341, Blast_Score=99, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.183 [H]
Molecular weight: Translated: 19484; Mature: 19353
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLELRAVRNADIPAITAIYAEQVAGVNTYEYRAPSLDEMRARVSAIVDAGYPYLVAELD CCCCCCHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHH GVVAGYAYASAFRARAGYRWTVENSIYLSAAMQGRGIGKALLGELIAVCEQRGFRQMIAV HHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHH IGDAGNLASRHLHERFGFRTVGVFNGIGRKHGRWLDGVQMQRALGSGDTAPPPDEKTHD HCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure PLELRAVRNADIPAITAIYAEQVAGVNTYEYRAPSLDEMRARVSAIVDAGYPYLVAELD CCCCCHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHH GVVAGYAYASAFRARAGYRWTVENSIYLSAAMQGRGIGKALLGELIAVCEQRGFRQMIAV HHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHH IGDAGNLASRHLHERFGFRTVGVFNGIGRKHGRWLDGVQMQRALGSGDTAPPPDEKTHD HCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA