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The map label for this gene is traB

Identifier: 21243040

GI number: 21243040

Start: 2694132

End: 2695364

Strand: Direct

Name: traB

Synonym: XAC2305

Alternate gene names: NA

Gene position: 2694132-2695364 (Clockwise)

Preceding gene: 21243039

Following gene: 77748646

Centisome position: 52.05

GC content: 65.37

Gene sequence:

>1233_bases
ATGAAAAGACCCATGACTGAGCAGCCCCCCCACGTTCTGGACGATGCGCTGTCCGGCCAGCCGCATCGCATCGTCGAACG
CGACGGCGTGCGCTATACCTTGCTCGGCACCGCGCACGTGTCGCTGGCCAGCGTCGCCGCCGTGCAACGGGCGATCGGCA
GCGGGCGTTACGACGCAGTGGCGGTGGAACTGGATGCGCAGCGCCTGCAAGCGCTCAGCGATCCCGATGCCCTCGCCCGC
CTGGATCTGGTACAGGTGATCCGCAAGGGGCGCGTGGCCTTGTTCGCGGCGAATCTGGCCCTGGCGGCGTATCAGCGTCG
CTTGGCCAAGCAACTGGGCATCGAACCGGGCGCGGAATTGAAGGAGGCGGTGAACCTGGCGCGCGCGCAAGGCTTGCCGG
TGCATCTGATCGATCGCGAGGTCGGCCTGACCTTCAAACGCGCATCCGGGCGCCTGGGATTTTTCGGCAAGATGAAACTG
GCCGGCGGGTTGCTCGGCGGCCTGTTCGCTGCCGACGAGGTGGGCGAAGAGGAAATCGAAAAGCTCAAGCAAGGCGACAT
GCTGGAGGCAAGCTTCGGCGATTTCGCCAGCGAAAGCCCGGAGCTGTACGAAACGGTGATCGCCGAGCGCGATCAATACA
TGGCCACACGTTTGCGTGAAGAAGTCGGCGCAGACCAGCGCGAGATCTTGGCGGTAGTCGGCGCCGGGCATCTGGCCGGG
CTCGCGCGCCATCTGGAACAGGACACCGCTGCCCCCGGCCCGCTGCGCGAATCGCTGGAGTACGTGCAGCAGCGCAAGCG
TATCCCGTGGATCACGCTGGGCATCCTGGCGGTGATCATCACTGGCATCGGTATCGGGTTCTGGCGTGGTGGCCTGAGCA
TGGGCGCGGACCTGTTGTTGCAGTGGGCCATGTACACCGGCGGCATGGCCGCGCTCGGCTGCTTGCTGGCGGGTAGCCAC
CCGTTGAGCATTCTCACCGCCGCGGTCGTTGCGCCATTCAAACCATTCCGCCTGAGCGTGCCGACCGGTGCATTCGCCGC
GCTGGTCGAAGTGCATATGCGCAAGCCGGCCTACGGCGATTTTCTATCGCTGCGCGACGATGCGCAGACGCTGCGCGGCT
GGTACCGCAACCGCGTCTCGCGCGTGGTGCTGACATTCCTGCTGACCAATTTCGGCAGCATGGCCGGTGTGTGGCTGGCC
GGGGTGCAGATCTTTAACCGTCTGCATGGGTGA

Upstream 100 bases:

>100_bases
GTCGGAGTCTTCAACGGAATCGGCCGCAAACACGGCCGCTGGCTGGACGGCGTGCAGATGCAACGCGCGCTCGGCTCCGG
CGACACCGCCCCTCCTCCTG

Downstream 100 bases:

>100_bases
GCGTGGCGGCGCTGAATCCGCCAGATCCAGACCGTTCGTAGGAGCACACCCGGGCGCGATGAGGCTTTACCGGTAAATCC
CTGTCGCGCCCAGGTGCGCT

Product: pheromone shutdown protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MKRPMTEQPPHVLDDALSGQPHRIVERDGVRYTLLGTAHVSLASVAAVQRAIGSGRYDAVAVELDAQRLQALSDPDALAR
LDLVQVIRKGRVALFAANLALAAYQRRLAKQLGIEPGAELKEAVNLARAQGLPVHLIDREVGLTFKRASGRLGFFGKMKL
AGGLLGGLFAADEVGEEEIEKLKQGDMLEASFGDFASESPELYETVIAERDQYMATRLREEVGADQREILAVVGAGHLAG
LARHLEQDTAAPGPLRESLEYVQQRKRIPWITLGILAVIITGIGIGFWRGGLSMGADLLLQWAMYTGGMAALGCLLAGSH
PLSILTAAVVAPFKPFRLSVPTGAFAALVEVHMRKPAYGDFLSLRDDAQTLRGWYRNRVSRVVLTFLLTNFGSMAGVWLA
GVQIFNRLHG

Sequences:

>Translated_410_residues
MKRPMTEQPPHVLDDALSGQPHRIVERDGVRYTLLGTAHVSLASVAAVQRAIGSGRYDAVAVELDAQRLQALSDPDALAR
LDLVQVIRKGRVALFAANLALAAYQRRLAKQLGIEPGAELKEAVNLARAQGLPVHLIDREVGLTFKRASGRLGFFGKMKL
AGGLLGGLFAADEVGEEEIEKLKQGDMLEASFGDFASESPELYETVIAERDQYMATRLREEVGADQREILAVVGAGHLAG
LARHLEQDTAAPGPLRESLEYVQQRKRIPWITLGILAVIITGIGIGFWRGGLSMGADLLLQWAMYTGGMAALGCLLAGSH
PLSILTAAVVAPFKPFRLSVPTGAFAALVEVHMRKPAYGDFLSLRDDAQTLRGWYRNRVSRVVLTFLLTNFGSMAGVWLA
GVQIFNRLHG
>Mature_410_residues
MKRPMTEQPPHVLDDALSGQPHRIVERDGVRYTLLGTAHVSLASVAAVQRAIGSGRYDAVAVELDAQRLQALSDPDALAR
LDLVQVIRKGRVALFAANLALAAYQRRLAKQLGIEPGAELKEAVNLARAQGLPVHLIDREVGLTFKRASGRLGFFGKMKL
AGGLLGGLFAADEVGEEEIEKLKQGDMLEASFGDFASESPELYETVIAERDQYMATRLREEVGADQREILAVVGAGHLAG
LARHLEQDTAAPGPLRESLEYVQQRKRIPWITLGILAVIITGIGIGFWRGGLSMGADLLLQWAMYTGGMAALGCLLAGSH
PLSILTAAVVAPFKPFRLSVPTGAFAALVEVHMRKPAYGDFLSLRDDAQTLRGWYRNRVSRVVLTFLLTNFGSMAGVWLA
GVQIFNRLHG

Specific function: Unknown

COG id: COG1916

COG function: function code S; Uncharacterized homolog of PrgY (pheromone shutdown protein)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI33342278, Length=207, Percent_Identity=33.3333333333333, Blast_Score=102, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI71988206, Length=282, Percent_Identity=25.531914893617, Blast_Score=71, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI71988217, Length=282, Percent_Identity=25.531914893617, Blast_Score=71, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24646455, Length=204, Percent_Identity=29.9019607843137, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21357445, Length=204, Percent_Identity=29.9019607843137, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002816
- InterPro:   IPR005230 [H]

Pfam domain/function: PF01963 TraB [H]

EC number: NA

Molecular weight: Translated: 44419; Mature: 44419

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRPMTEQPPHVLDDALSGQPHRIVERDGVRYTLLGTAHVSLASVAAVQRAIGSGRYDAV
CCCCCCCCCCHHHHHHHCCCCCHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCEE
AVELDAQRLQALSDPDALARLDLVQVIRKGRVALFAANLALAAYQRRLAKQLGIEPGAEL
EEEECHHHHHHCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCCHHH
KEAVNLARAQGLPVHLIDREVGLTFKRASGRLGFFGKMKLAGGLLGGLFAADEVGEEEIE
HHHHHHHHHCCCCEEEECHHHCCEEEECCCCCCCEEHHHHHHHHHHHHHHHHHCCHHHHH
KLKQGDMLEASFGDFASESPELYETVIAERDQYMATRLREEVGADQREILAVVGAGHLAG
HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHH
LARHLEQDTAAPGPLRESLEYVQQRKRIPWITLGILAVIITGIGIGFWRGGLSMGADLLL
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
QWAMYTGGMAALGCLLAGSHPLSILTAAVVAPFKPFRLSVPTGAFAALVEVHMRKPAYGD
HHHHHHCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHCCCCCCC
FLSLRDDAQTLRGWYRNRVSRVVLTFLLTNFGSMAGVWLAGVQIFNRLHG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRPMTEQPPHVLDDALSGQPHRIVERDGVRYTLLGTAHVSLASVAAVQRAIGSGRYDAV
CCCCCCCCCCHHHHHHHCCCCCHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCEE
AVELDAQRLQALSDPDALARLDLVQVIRKGRVALFAANLALAAYQRRLAKQLGIEPGAEL
EEEECHHHHHHCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCCHHH
KEAVNLARAQGLPVHLIDREVGLTFKRASGRLGFFGKMKLAGGLLGGLFAADEVGEEEIE
HHHHHHHHHCCCCEEEECHHHCCEEEECCCCCCCEEHHHHHHHHHHHHHHHHHCCHHHHH
KLKQGDMLEASFGDFASESPELYETVIAERDQYMATRLREEVGADQREILAVVGAGHLAG
HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHH
LARHLEQDTAAPGPLRESLEYVQQRKRIPWITLGILAVIITGIGIGFWRGGLSMGADLLL
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
QWAMYTGGMAALGCLLAGSHPLSILTAAVVAPFKPFRLSVPTGAFAALVEVHMRKPAYGD
HHHHHHCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHCCCCCCC
FLSLRDDAQTLRGWYRNRVSRVVLTFLLTNFGSMAGVWLAGVQIFNRLHG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]