Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
---|---|
Accession | NC_003919 |
Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21243038
Identifier: 21243038
GI number: 21243038
Start: 2692724
End: 2693608
Strand: Direct
Name: 21243038
Synonym: XAC2303
Alternate gene names: NA
Gene position: 2692724-2693608 (Clockwise)
Preceding gene: 21243037
Following gene: 21243039
Centisome position: 52.03
GC content: 66.33
Gene sequence:
>885_bases ATGACCCGTCATCTCCTTCCCGTCGCGCTGATCCAGGAGCGCAACCACGGCGACGCCGAGGCCAACCTGGCCGTCATCGC ATCGCGCGTGGCCGAAGCCGCCGCGCAGGGCGCCAAGCTGGTGCTGCTGCAGGAACTGCATAACGGTGCGTATTTCTGCC AGCACGAGTCGGTGGACGAATTCAACCTGGCCGAGCCGATTCCCGGCCCCAGCACCGAGCGTCTGAGCGCGCTGGCCAAG CAGCACGGAGTGGTGCTGGTCGCATCGCTGTTCGAACGCCGCGCGGCCGGCCTGTATCACAACACCGCGGTGGTGTTCGA AAAGGACGGCCGCCTGCTCGGCAAGTACCGCAAGATGCACATCCCCGACGATCCGGGCTTCTACGAGAAGTTCTATTTCA CTCCGGGCGATCTGGGCTTCACGCCGATCGATACCTCGGTGGGCCGCCTTGGCGTGCTGGTGTGCTGGGACCAGTGGTAT CCGGAGGCGGCGCGCCTGATGGCGCTGGCCGGTGCGGAGCTGCTGCTCTACCCCACGGCGATCGGTTGGGATCCGGACGA CCAGCAGCCGGAGCAGGAGCGCCAGCGCGATGCCTGGATCCTCAGCCATCGCGGCCATGCGGTCGCCAACGGCGTGCCGG TACTGTCGTGCAACCGGGTCGGCCATGAGCCCTCCCCGCTGGGCGCATCGGGCATCCAGTTCTGGGGCAACAGCCATGTG CTGGGGCCGCAGGGCGAGTTCATTGCCGAAGCCGGCCAGGACCCGACCGTACTGATCTGCGATGTCGACCTGCAACGCAG CGAACATGTGCGCCGCATTTGGCCATTCCTGCGCGACCGTCGCATCGATGCGTACGGCGATCTGCTCAAGCGCTACATCG ACTGA
Upstream 100 bases:
>100_bases TTGCGGCCGCACAGACCGCGCGTGGCTCCTGTTCCGGCCGGCAGGCCGGTGTTACGCCATGGCGCGCTACCTTAGTGCGT TACTTACGTTGGATGCTGCC
Downstream 100 bases:
>100_bases CGCATGCCACTCGAGTTGCGTGCGGTCCGCAATGCGGACATTCCGGCGATCACTGCGATCTATGCGGAGCAGGTCGCCGG GGTCAATACCTACGAATACA
Product: beta-alanine synthetase
Products: NA
Alternate protein names: D-N-alpha-carbamilase [H]
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MTRHLLPVALIQERNHGDAEANLAVIASRVAEAAAQGAKLVLLQELHNGAYFCQHESVDEFNLAEPIPGPSTERLSALAK QHGVVLVASLFERRAAGLYHNTAVVFEKDGRLLGKYRKMHIPDDPGFYEKFYFTPGDLGFTPIDTSVGRLGVLVCWDQWY PEAARLMALAGAELLLYPTAIGWDPDDQQPEQERQRDAWILSHRGHAVANGVPVLSCNRVGHEPSPLGASGIQFWGNSHV LGPQGEFIAEAGQDPTVLICDVDLQRSEHVRRIWPFLRDRRIDAYGDLLKRYID
Sequences:
>Translated_294_residues MTRHLLPVALIQERNHGDAEANLAVIASRVAEAAAQGAKLVLLQELHNGAYFCQHESVDEFNLAEPIPGPSTERLSALAK QHGVVLVASLFERRAAGLYHNTAVVFEKDGRLLGKYRKMHIPDDPGFYEKFYFTPGDLGFTPIDTSVGRLGVLVCWDQWY PEAARLMALAGAELLLYPTAIGWDPDDQQPEQERQRDAWILSHRGHAVANGVPVLSCNRVGHEPSPLGASGIQFWGNSHV LGPQGEFIAEAGQDPTVLICDVDLQRSEHVRRIWPFLRDRRIDAYGDLLKRYID >Mature_293_residues TRHLLPVALIQERNHGDAEANLAVIASRVAEAAAQGAKLVLLQELHNGAYFCQHESVDEFNLAEPIPGPSTERLSALAKQ HGVVLVASLFERRAAGLYHNTAVVFEKDGRLLGKYRKMHIPDDPGFYEKFYFTPGDLGFTPIDTSVGRLGVLVCWDQWYP EAARLMALAGAELLLYPTAIGWDPDDQQPEQERQRDAWILSHRGHAVANGVPVLSCNRVGHEPSPLGASGIQFWGNSHVL GPQGEFIAEAGQDPTVLICDVDLQRSEHVRRIWPFLRDRRIDAYGDLLKRYID
Specific function: The enzyme catalyzes the hydrolysis of N-carbamoyl-D- amino acids to the corresponding which are useful intermediates in the preparation of beta-lactam antibiotics. Industrial production of beta-lactam antibiotics is now being developed using this enzyme
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Homo sapiens, GI9910460, Length=289, Percent_Identity=33.5640138408304, Blast_Score=147, Evalue=1e-35, Organism=Homo sapiens, GI297632348, Length=291, Percent_Identity=27.8350515463918, Blast_Score=108, Evalue=7e-24, Organism=Homo sapiens, GI297632350, Length=291, Percent_Identity=27.8350515463918, Blast_Score=107, Evalue=9e-24, Organism=Homo sapiens, GI5031947, Length=291, Percent_Identity=27.8350515463918, Blast_Score=107, Evalue=9e-24, Organism=Homo sapiens, GI7706509, Length=280, Percent_Identity=29.6428571428571, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI297632346, Length=195, Percent_Identity=30.7692307692308, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17533173, Length=280, Percent_Identity=30, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17556280, Length=292, Percent_Identity=25, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17557111, Length=258, Percent_Identity=26.7441860465116, Blast_Score=66, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6323383, Length=299, Percent_Identity=31.1036789297659, Blast_Score=126, Evalue=4e-30, Organism=Saccharomyces cerevisiae, GI6322335, Length=318, Percent_Identity=25.4716981132075, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI21358471, Length=288, Percent_Identity=29.8611111111111, Blast_Score=119, Evalue=2e-27, Organism=Drosophila melanogaster, GI21355835, Length=293, Percent_Identity=26.6211604095563, Blast_Score=97, Evalue=9e-21, Organism=Drosophila melanogaster, GI17933642, Length=286, Percent_Identity=25.8741258741259, Blast_Score=88, Evalue=5e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: =3.5.1.77 [H]
Molecular weight: Translated: 32717; Mature: 32586
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRHLLPVALIQERNHGDAEANLAVIASRVAEAAAQGAKLVLLQELHNGAYFCQHESVDE CCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEHHCCCEEEEECCCCCC FNLAEPIPGPSTERLSALAKQHGVVLVASLFERRAAGLYHNTAVVFEKDGRLLGKYRKMH CCCCCCCCCCCHHHHHHHHHHCCEEEEHHHHHHHHCCCEECEEEEEECCCCHHHHHHCCC IPDDPGFYEKFYFTPGDLGFTPIDTSVGRLGVLVCWDQWYPEAARLMALAGAELLLYPTA CCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCEEEEEEEE IGWDPDDQQPEQERQRDAWILSHRGHAVANGVPVLSCNRVGHEPSPLGASGIQFWGNSHV CCCCCCCCCCHHHHHHHHEEEECCCCCHHCCCCEEEECCCCCCCCCCCCCCCEECCCCEE LGPQGEFIAEAGQDPTVLICDVDLQRSEHVRRIWPFLRDRRIDAYGDLLKRYID ECCCCHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCC >Mature Secondary Structure TRHLLPVALIQERNHGDAEANLAVIASRVAEAAAQGAKLVLLQELHNGAYFCQHESVDE CCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEHHCCCEEEEECCCCCC FNLAEPIPGPSTERLSALAKQHGVVLVASLFERRAAGLYHNTAVVFEKDGRLLGKYRKMH CCCCCCCCCCCHHHHHHHHHHCCEEEEHHHHHHHHCCCEECEEEEEECCCCHHHHHHCCC IPDDPGFYEKFYFTPGDLGFTPIDTSVGRLGVLVCWDQWYPEAARLMALAGAELLLYPTA CCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCEEEEEEEE IGWDPDDQQPEQERQRDAWILSHRGHAVANGVPVLSCNRVGHEPSPLGASGIQFWGNSHV CCCCCCCCCCHHHHHHHHEEEECCCCCHHCCCCEEEECCCCCCCCCCCCCCCEECCCCEE LGPQGEFIAEAGQDPTVLICDVDLQRSEHVRRIWPFLRDRRIDAYGDLLKRYID ECCCCHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9648217; 10903946 [H]