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The map label for this gene is cycK [H]

Identifier: 21242425

GI number: 21242425

Start: 1934266

End: 1936254

Strand: Reverse

Name: cycK [H]

Synonym: XAC1676

Alternate gene names: 21242425

Gene position: 1936254-1934266 (Counterclockwise)

Preceding gene: 21242426

Following gene: 21242424

Centisome position: 37.41

GC content: 66.67

Gene sequence:

>1989_bases
ATGACGCCTGAACTCGGCCAGATCGCACTGATCCTGGCACTGCTGTTATCGCTCGCCCAGGGCGTACTGCCCTTGATCGG
TGCGTGGCGCGGCAACACCGCGTTGATGGGGATCGCGCGGCCTGCAGCAGTGGGCCAGGCGGTGTTCGTGTGGATGGCGT
TCGGCCTGCTCGCCTGGTCGTTGTTGTCGCTGGATTTTTCGGTGGCCTACGTCGCCGCCAACGCCAACATCGCCCTGCCC
TGGTACTACCGCGTTGCGGCGGTGTGGGGCGCCCACGAAGGCTCGCTGTTGTTGTGGATCGCCATCCTGGCCACCTGGAC
GGTGCTGCTGGCCGCCTTCAGCCGGCACCTGCCGCAGCGCTTCGCCGCCCGCGTGCTGGCGGTCTTGGGGCTGATCTCGC
TGGGCTTTCTGGCCTTCATACTGCTGACGTCCAATCCGTTCGGGCGGCTGTCGCCGATTCCGCTGGATGGCAACGAACTC
AATCCGGTGTTGCAGGACCCGGGCATGACCTTCCACCCGCCAGTGCTGTACACCGGCTATGTCGGGTTTTCGGTGGCATT
CGCATTCGCAGTGGCGGCATTGATCGGCGGCGACCTCGAACAGGCCTGGGTACGCTGGGCTCGGCCGTGGACCAATGTGG
CCTGGGCCTGCCTCACCGCCGGCATCGTCGCCGGCAGCTGGTGGGCCTATGCGGAACTGGGCTGGGGCGGCTGGTGGTTC
TGGGACCCGGTGGAAAACGCCAGTTTCATGCCATGGCTGGTCGGCACCGCGTTGATCCACTCCCAGGCGGTCACCGAAAA
ACGCGGCAGCCTGCGCGCGTGGACCATCCTGCTGTCGATCCTGGCGTTTTCGCTGTCGTTGCTGGGCACCTTCCTGGTGC
GCTCGGGCGTGCTGACCTCGGTGCACGCGTTTGCGGCCGATCCGCGCCGCGGCCTGTACATCCTCATTTTTCTGGTTGCC
GTCGTCGGCGGCTCGTTGCTGTTGTATGCACTGCGTGCGCCCAAGATCGCCAGCGGCAAACCGTTTGCCGCTGCCTCGCG
CGAAACCGGCATTCTCATCGGCAACCTGCTGCTCACCGTGGCCGCGGCCATGGTCTTGCTGGGCACCTTGTTTCCGCTGA
TCGCCGACGCGTTTGCGCTGGGCAAGGTGTCGGTGGGGCCGCCCTATTTCGGCCTGCTGTTTCCGTTGTTGATGTTGCCG
GTGGTGCTGTTGCTGCCGTTCGGCCCGTACCTGCGCTGGGGCAAGGCCGAAGCCGCACCGTTGAAAGCGCTCGGCACGCG
TGCCGGCATTGCCGCGATCGCCTGCGCCCTGGTCGGCAGTGTGTTTGCCGATGGCCAGGCCAAGGCGATGGCCGGCATGG
GTGTGGCCGCATGGGTGGCCGCGGGCACCGCGCTGTACGTGGTCAAACGCTGGCGCGACATGCCGCGCGGGCGGCGCTTT
CCGGCGGAAATGGCCGGCATGCTGATCGCGCATGCGGGCGTGGCGGCGTTCGTTGCCGGCGTGCTGGTCTCCGAAAGCCT
GTCGGTGGAACGCGATGTGCGGCTGTCGCCCGGCCAGAGCGCGCAGATCGCCGGCTACAACTTCCGCTTCGATGGCGTGC
AGCTGGTGGATGGGCCGAACTGGAAGGCCGAACAAGGCAGCGTGCAGGTCAGCCGCGACGGCCAGGTGGTCGCGCAACTG
CATCCGCAAAAACGCCTGTACAGCAGCGAGCGGATCCAGACCGAATCGGCGATCGATCCCGGCATCGCCCGCGACCTGTA
TGTGGCGCTGGGCGAGCCACTGGACGATGAGCACATCGAACACGACTGGACGCTGCGCCTTTACTACAAACCCTTCATTC
GCTGGATCTGGGCCGGTGGCCTGCTGATGATGCTGGGCGGCTTCGTCAGCGCCTGCGCACGCCGCTTGCGTGCGCCGGCG
ACTGCACACACCTCGGTCGCCTCTCCGGCGCAACCAGCGCGCGTCATCGCACAGGAATCGCGCCCGTGA

Upstream 100 bases:

>100_bases
CGCCACCGTCGCACCGCTGACCGCGCCGCGTTGATGCGCTTGCGGTCATTGCCACGCACGTCGATGACGTCCTCTTTCCG
TTTCACCTTGCGATCCGCCC

Downstream 100 bases:

>100_bases
ATCGTTTGCTGCCCTTGCTGGGCTTCGTGTTGCTGGCGGCGCTGTTCGGCGTCGGCATCCTGCGGACGATGCAGCACAGT
CCGCGTGATGTGCCCTCGCC

Product: C-type cytochrome biogenesis membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 662; Mature: 661

Protein sequence:

>662_residues
MTPELGQIALILALLLSLAQGVLPLIGAWRGNTALMGIARPAAVGQAVFVWMAFGLLAWSLLSLDFSVAYVAANANIALP
WYYRVAAVWGAHEGSLLLWIAILATWTVLLAAFSRHLPQRFAARVLAVLGLISLGFLAFILLTSNPFGRLSPIPLDGNEL
NPVLQDPGMTFHPPVLYTGYVGFSVAFAFAVAALIGGDLEQAWVRWARPWTNVAWACLTAGIVAGSWWAYAELGWGGWWF
WDPVENASFMPWLVGTALIHSQAVTEKRGSLRAWTILLSILAFSLSLLGTFLVRSGVLTSVHAFAADPRRGLYILIFLVA
VVGGSLLLYALRAPKIASGKPFAAASRETGILIGNLLLTVAAAMVLLGTLFPLIADAFALGKVSVGPPYFGLLFPLLMLP
VVLLLPFGPYLRWGKAEAAPLKALGTRAGIAAIACALVGSVFADGQAKAMAGMGVAAWVAAGTALYVVKRWRDMPRGRRF
PAEMAGMLIAHAGVAAFVAGVLVSESLSVERDVRLSPGQSAQIAGYNFRFDGVQLVDGPNWKAEQGSVQVSRDGQVVAQL
HPQKRLYSSERIQTESAIDPGIARDLYVALGEPLDDEHIEHDWTLRLYYKPFIRWIWAGGLLMMLGGFVSACARRLRAPA
TAHTSVASPAQPARVIAQESRP

Sequences:

>Translated_662_residues
MTPELGQIALILALLLSLAQGVLPLIGAWRGNTALMGIARPAAVGQAVFVWMAFGLLAWSLLSLDFSVAYVAANANIALP
WYYRVAAVWGAHEGSLLLWIAILATWTVLLAAFSRHLPQRFAARVLAVLGLISLGFLAFILLTSNPFGRLSPIPLDGNEL
NPVLQDPGMTFHPPVLYTGYVGFSVAFAFAVAALIGGDLEQAWVRWARPWTNVAWACLTAGIVAGSWWAYAELGWGGWWF
WDPVENASFMPWLVGTALIHSQAVTEKRGSLRAWTILLSILAFSLSLLGTFLVRSGVLTSVHAFAADPRRGLYILIFLVA
VVGGSLLLYALRAPKIASGKPFAAASRETGILIGNLLLTVAAAMVLLGTLFPLIADAFALGKVSVGPPYFGLLFPLLMLP
VVLLLPFGPYLRWGKAEAAPLKALGTRAGIAAIACALVGSVFADGQAKAMAGMGVAAWVAAGTALYVVKRWRDMPRGRRF
PAEMAGMLIAHAGVAAFVAGVLVSESLSVERDVRLSPGQSAQIAGYNFRFDGVQLVDGPNWKAEQGSVQVSRDGQVVAQL
HPQKRLYSSERIQTESAIDPGIARDLYVALGEPLDDEHIEHDWTLRLYYKPFIRWIWAGGLLMMLGGFVSACARRLRAPA
TAHTSVASPAQPARVIAQESRP
>Mature_661_residues
TPELGQIALILALLLSLAQGVLPLIGAWRGNTALMGIARPAAVGQAVFVWMAFGLLAWSLLSLDFSVAYVAANANIALPW
YYRVAAVWGAHEGSLLLWIAILATWTVLLAAFSRHLPQRFAARVLAVLGLISLGFLAFILLTSNPFGRLSPIPLDGNELN
PVLQDPGMTFHPPVLYTGYVGFSVAFAFAVAALIGGDLEQAWVRWARPWTNVAWACLTAGIVAGSWWAYAELGWGGWWFW
DPVENASFMPWLVGTALIHSQAVTEKRGSLRAWTILLSILAFSLSLLGTFLVRSGVLTSVHAFAADPRRGLYILIFLVAV
VGGSLLLYALRAPKIASGKPFAAASRETGILIGNLLLTVAAAMVLLGTLFPLIADAFALGKVSVGPPYFGLLFPLLMLPV
VLLLPFGPYLRWGKAEAAPLKALGTRAGIAAIACALVGSVFADGQAKAMAGMGVAAWVAAGTALYVVKRWRDMPRGRRFP
AEMAGMLIAHAGVAAFVAGVLVSESLSVERDVRLSPGQSAQIAGYNFRFDGVQLVDGPNWKAEQGSVQVSRDGQVVAQLH
PQKRLYSSERIQTESAIDPGIARDLYVALGEPLDDEHIEHDWTLRLYYKPFIRWIWAGGLLMMLGGFVSACARRLRAPAT
AHTSVASPAQPARVIAQESRP

Specific function: Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG1138

COG function: function code O; Cytochrome c biogenesis factor

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

Organism=Escherichia coli, GI1788524, Length=656, Percent_Identity=49.8475609756098, Blast_Score=591, Evalue=1e-170,
Organism=Escherichia coli, GI1790511, Length=577, Percent_Identity=37.261698440208, Blast_Score=305, Evalue=8e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003567
- InterPro:   IPR003568 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 71060; Mature: 70929

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPELGQIALILALLLSLAQGVLPLIGAWRGNTALMGIARPAAVGQAVFVWMAFGLLAWS
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH
LLSLDFSVAYVAANANIALPWYYRVAAVWGAHEGSLLLWIAILATWTVLLAAFSRHLPQR
HHHHHHEEEEEEECCCEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FAARVLAVLGLISLGFLAFILLTSNPFGRLSPIPLDGNELNPVLQDPGMTFHPPVLYTGY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHEEHH
VGFSVAFAFAVAALIGGDLEQAWVRWARPWTNVAWACLTAGIVAGSWWAYAELGWGGWWF
HHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHEEEECCCCEEE
WDPVENASFMPWLVGTALIHSQAVTEKRGSLRAWTILLSILAFSLSLLGTFLVRSGVLTS
ECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VHAFAADPRRGLYILIFLVAVVGGSLLLYALRAPKIASGKPFAAASRETGILIGNLLLTV
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
AAAMVLLGTLFPLIADAFALGKVSVGPPYFGLLFPLLMLPVVLLLPFGPYLRWGKAEAAP
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCH
LKALGTRAGIAAIACALVGSVFADGQAKAMAGMGVAAWVAAGTALYVVKRWRDMPRGRRF
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
PAEMAGMLIAHAGVAAFVAGVLVSESLSVERDVRLSPGQSAQIAGYNFRFDGVQLVDGPN
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECEEEEECCEEEECCCC
WKAEQGSVQVSRDGQVVAQLHPQKRLYSSERIQTESAIDPGIARDLYVALGEPLDDEHIE
CCCCCCCEEEECCCCEEEEECCHHHHHHHHHHCHHHCCCCCHHHHHHHHHCCCCCCCCCC
HDWTLRLYYKPFIRWIWAGGLLMMLGGFVSACARRLRAPATAHTSVASPAQPARVIAQES
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCC
RP
CC
>Mature Secondary Structure 
TPELGQIALILALLLSLAQGVLPLIGAWRGNTALMGIARPAAVGQAVFVWMAFGLLAWS
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH
LLSLDFSVAYVAANANIALPWYYRVAAVWGAHEGSLLLWIAILATWTVLLAAFSRHLPQR
HHHHHHEEEEEEECCCEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FAARVLAVLGLISLGFLAFILLTSNPFGRLSPIPLDGNELNPVLQDPGMTFHPPVLYTGY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHEEHH
VGFSVAFAFAVAALIGGDLEQAWVRWARPWTNVAWACLTAGIVAGSWWAYAELGWGGWWF
HHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHEEEECCCCEEE
WDPVENASFMPWLVGTALIHSQAVTEKRGSLRAWTILLSILAFSLSLLGTFLVRSGVLTS
ECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VHAFAADPRRGLYILIFLVAVVGGSLLLYALRAPKIASGKPFAAASRETGILIGNLLLTV
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
AAAMVLLGTLFPLIADAFALGKVSVGPPYFGLLFPLLMLPVVLLLPFGPYLRWGKAEAAP
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCH
LKALGTRAGIAAIACALVGSVFADGQAKAMAGMGVAAWVAAGTALYVVKRWRDMPRGRRF
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
PAEMAGMLIAHAGVAAFVAGVLVSESLSVERDVRLSPGQSAQIAGYNFRFDGVQLVDGPN
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECEEEEECCEEEECCCC
WKAEQGSVQVSRDGQVVAQLHPQKRLYSSERIQTESAIDPGIARDLYVALGEPLDDEHIE
CCCCCCCEEEECCCCEEEEECCHHHHHHHHHHCHHHCCCCCHHHHHHHHHCCCCCCCCCC
HDWTLRLYYKPFIRWIWAGGLLMMLGGFVSACARRLRAPATAHTSVASPAQPARVIAQES
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCC
RP
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]