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The map label for this gene is dsbE [H]

Identifier: 21242424

GI number: 21242424

Start: 1933727

End: 1934269

Strand: Reverse

Name: dsbE [H]

Synonym: XAC1675

Alternate gene names: 21242424

Gene position: 1934269-1933727 (Counterclockwise)

Preceding gene: 21242425

Following gene: 21242423

Centisome position: 37.37

GC content: 65.01

Gene sequence:

>543_bases
GTGAATCGTTTGCTGCCCTTGCTGGGCTTCGTGTTGCTGGCGGCGCTGTTCGGCGTCGGCATCCTGCGGACGATGCAGCA
CAGTCCGCGTGATGTGCCCTCGCCGTTGATCGGCAAGCCGGCACCAGCGTTTTCGTTGCCGCGGCTGGATCAGCCCGAAC
AGCGCGTGAGCCGCGATCAATTGCTGGGCAACCCCTACGTGCTGAATGTGTTCGGCAGCTGGTGCGCCGAATGCGTGCAT
GAGCATCCGGTGTTGATGGCCCAGGCCAGCCGGCTCGGCGTGCCGCTGATCGGCTACAACTACAAGGATGTTCCGGCCGA
TGCCACCGCCTGGCTCGCGCGACTCGGCAACCCGTATGCAGTGGTGATCGCCGATGAAGCCGGCCAGACCGCCATCGACT
TCGGCGTCTACGGCGCACCGGAGACGTTCCTGATCGATGCGCAGGGCGTGATCCGCTACAAACACATCGGCGTGCTGACC
CCCGATGCGATCAACGACGAGCTGCTGCCGGCCATCGCATCGCTTCCCAAGGCCGCGCCGTGA

Upstream 100 bases:

>100_bases
TCAGCGCCTGCGCACGCCGCTTGCGTGCGCCGGCGACTGCACACACCTCGGTCGCCTCTCCGGCGCAACCAGCGCGCGTC
ATCGCACAGGAATCGCGCCC

Downstream 100 bases:

>100_bases
TGGCGTCGGCGCGCTACACACGCCTGTGGCATTGGCGCTGGCAGTGGCGCACGCAAGGCCGCCGTGTGCGCCTGCTGCTG
GTGTTGCTGCTTGGCGTGCT

Product: C-type cytochrome biogenesis protein/thioredoxin

Products: NA

Alternate protein names: Cytochrome c biogenesis protein CcmG [H]

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MNRLLPLLGFVLLAALFGVGILRTMQHSPRDVPSPLIGKPAPAFSLPRLDQPEQRVSRDQLLGNPYVLNVFGSWCAECVH
EHPVLMAQASRLGVPLIGYNYKDVPADATAWLARLGNPYAVVIADEAGQTAIDFGVYGAPETFLIDAQGVIRYKHIGVLT
PDAINDELLPAIASLPKAAP

Sequences:

>Translated_180_residues
MNRLLPLLGFVLLAALFGVGILRTMQHSPRDVPSPLIGKPAPAFSLPRLDQPEQRVSRDQLLGNPYVLNVFGSWCAECVH
EHPVLMAQASRLGVPLIGYNYKDVPADATAWLARLGNPYAVVIADEAGQTAIDFGVYGAPETFLIDAQGVIRYKHIGVLT
PDAINDELLPAIASLPKAAP
>Mature_180_residues
MNRLLPLLGFVLLAALFGVGILRTMQHSPRDVPSPLIGKPAPAFSLPRLDQPEQRVSRDQLLGNPYVLNVFGSWCAECVH
EHPVLMAQASRLGVPLIGYNYKDVPADATAWLARLGNPYAVVIADEAGQTAIDFGVYGAPETFLIDAQGVIRYKHIGVLT
PDAINDELLPAIASLPKAAP

Specific function: Involved in disulfide bond formation. Catalyzes a late, reductive step in the assembly of periplasmic c-type cytochromes, probably the reduction of disulfide bonds of the apocytochrome c to allow covalent linkage with the heme. Possible subunit of a heme

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1788523, Length=178, Percent_Identity=43.8202247191011, Blast_Score=142, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004799
- InterPro:   IPR013740
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR017937
- InterPro:   IPR012335 [H]

Pfam domain/function: PF08534 Redoxin [H]

EC number: NA

Molecular weight: Translated: 19387; Mature: 19387

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLLPLLGFVLLAALFGVGILRTMQHSPRDVPSPLIGKPAPAFSLPRLDQPEQRVSRDQ
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
LLGNPYVLNVFGSWCAECVHEHPVLMAQASRLGVPLIGYNYKDVPADATAWLARLGNPYA
HCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHCCCCEE
VVIADEAGQTAIDFGVYGAPETFLIDAQGVIRYKHIGVLTPDAINDELLPAIASLPKAAP
EEEECCCCCEEEECCCCCCCCEEEEECCCEEEEEECCEECCCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNRLLPLLGFVLLAALFGVGILRTMQHSPRDVPSPLIGKPAPAFSLPRLDQPEQRVSRDQ
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
LLGNPYVLNVFGSWCAECVHEHPVLMAQASRLGVPLIGYNYKDVPADATAWLARLGNPYA
HCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHCCCCEE
VVIADEAGQTAIDFGVYGAPETFLIDAQGVIRYKHIGVLTPDAINDELLPAIASLPKAAP
EEEECCCCCEEEECCCCCCCCEEEEECCCEEEEEECCEECCCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]