Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21242150
Identifier: 21242150
GI number: 21242150
Start: 1609232
End: 1610899
Strand: Reverse
Name: 21242150
Synonym: XAC1397
Alternate gene names: NA
Gene position: 1610899-1609232 (Counterclockwise)
Preceding gene: 21242153
Following gene: 21242148
Centisome position: 31.13
GC content: 63.13
Gene sequence:
>1668_bases ATGAGCTTAGAACCTTTGGGTTACTGCCTTTCTGGCCCGGCTTCACTACAGTCGGTGTCCCCTGCGCCGATAAGCTTCAC TCAGGGGTTTTTCACTTTTCGATGGGGCAACACGATGCAATTGACACGCTTGGCGCAGCCGGCCACGGCTGAAACTTCCT TTGGTGCCACCCGGCGCCTGTGCCTTGCGATTGGGTTGGCGCTGCCCGCACTGGGTTTTGCGCAGGTGCAACCGGCCCCG GCCAACGCCGAACAGGTCGTGGCCGAGCCAGCGAAAGCGCCGGCCACCGCCGCACCGGCGACCGCCAAGGGCTATCCGCT CGAAGCGCAGGGGTGGGGCGCCAAACAAGGCGGCAATATGTGGCAGGTGCGCTGGGCCGAAGACTGGTCGTACCTGAAGG ATCCGTCCAAGCGCAAGAGTCCGTTCGATCCGCTCAAGTACATCCCGCTCAACGACGACGGCGATGTGTATGTGTCGCTC AGCAACGAGTTGCGCGTGCGCAGCAATACCATCACCAATCCGGGCCTGATTCCCGGCAGCCATTCGCAGCAGCAGTATCT GCTGCGCGCCTTCTTCGGTGCGGACTTCCATGTGGGCGAGCACTTCCGTCTGTACACGGAATTGGCGCATGGCAGCCTGG ACGGGCGCAACGAGGGGACCAAGACCGGCACACAGGAAAACAACGCGATCCTGCAGCAGGTGTTCTTCGACGTGAAAGGC CGTATCGGCAGCGCCGACACCGGCCTGCGCGTCGGACGTCAGGTGTTCGTCGATGGCCCGACCACGCTGATGGCGCTGCG CGACAACACCGATATCTTCGTGACCTTCAACGGCGCGCGCGCCTGGGCAATCGGCGACAGGACGCGTGTTGACCTGTTCG ATTTCAATTTCAACATCGATGGCACCGAAGGCCTCGGCGATGATCGCATCGACCGCTCGCGGCACTTTCGCGGCGTGGTC GGTGGCTACCGCCTGGCGACGGCCAAGCCGATGTACCTGGAGCCGTTCTTCTATCAGTTCCGCAACGACAACCAGGTGTG GGGCCGTCAGACCGCAGAAGAAAACCGCAATTACTACGGTCTGCGCCTGTGGGGCAACGTGGGCAAGCTGCGCACCGATT CGTTCGTGACCGTGCAGCGCGGCAGCTTCGGCGGACGCGACCTGCGCGCCTACATGGCCAGTACCTCCAACGCCTGGTCG CTGAGCGAATCGGGCTGGAAGCCACGCCTGGGCTTCCATAGCGAAATCGCTTCCGGTGGCGGCGGCACCTCCGGCACCGG CACGCTGCGCAACAACAACTTCTTGTACGGCAACACGATCTACTTCAGCTGGGCCACGTTCTTCGGCCCGGTGAACCTGG TCACTGCCGCACCGACGTTGACGTTCTCGCCGACCTCCAAGCTCACCGTGAACCTGGAGTGGGAAACGCTGTGGCGCCAG ACCACCAGCGATGCGATCTACAACAACCAGGCGCGCGCCTACGCACGCACTCAGAACACCGGCGAGCGCCGCATCGGCAC CATGCCGCGCATCAACGCCACCTGGAACATCGACCCGAACTGGTCGGTGACCTTCCGCGCCGAACATCTGATGGCCGGGC CGGCGTTGGAGAAGGCCGGCTACGGCGATTCGACCTTCGTGATGGGCTGGTTGAACTTCCGCTTCTGA
Upstream 100 bases:
>100_bases GAAGTGGCTGCTTCGCCGTAGGCATGCCGCTGCCCTTGCGATTCCCGACTCCCGATTCCCGACTCCTGTCGCGCCCGCCT GCGCAAACCCCAGTGCGTTC
Downstream 100 bases:
>100_bases ACACAGCTGTTGGGTGCGCCGTCCATCTCCAAGATACAGTGGCGCCATCACGTGCCGCGTCCCGCAAGGACGCGGCATGT CGTTTTTACGTGCGGAATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 555; Mature: 554
Protein sequence:
>555_residues MSLEPLGYCLSGPASLQSVSPAPISFTQGFFTFRWGNTMQLTRLAQPATAETSFGATRRLCLAIGLALPALGFAQVQPAP ANAEQVVAEPAKAPATAAPATAKGYPLEAQGWGAKQGGNMWQVRWAEDWSYLKDPSKRKSPFDPLKYIPLNDDGDVYVSL SNELRVRSNTITNPGLIPGSHSQQQYLLRAFFGADFHVGEHFRLYTELAHGSLDGRNEGTKTGTQENNAILQQVFFDVKG RIGSADTGLRVGRQVFVDGPTTLMALRDNTDIFVTFNGARAWAIGDRTRVDLFDFNFNIDGTEGLGDDRIDRSRHFRGVV GGYRLATAKPMYLEPFFYQFRNDNQVWGRQTAEENRNYYGLRLWGNVGKLRTDSFVTVQRGSFGGRDLRAYMASTSNAWS LSESGWKPRLGFHSEIASGGGGTSGTGTLRNNNFLYGNTIYFSWATFFGPVNLVTAAPTLTFSPTSKLTVNLEWETLWRQ TTSDAIYNNQARAYARTQNTGERRIGTMPRINATWNIDPNWSVTFRAEHLMAGPALEKAGYGDSTFVMGWLNFRF
Sequences:
>Translated_555_residues MSLEPLGYCLSGPASLQSVSPAPISFTQGFFTFRWGNTMQLTRLAQPATAETSFGATRRLCLAIGLALPALGFAQVQPAP ANAEQVVAEPAKAPATAAPATAKGYPLEAQGWGAKQGGNMWQVRWAEDWSYLKDPSKRKSPFDPLKYIPLNDDGDVYVSL SNELRVRSNTITNPGLIPGSHSQQQYLLRAFFGADFHVGEHFRLYTELAHGSLDGRNEGTKTGTQENNAILQQVFFDVKG RIGSADTGLRVGRQVFVDGPTTLMALRDNTDIFVTFNGARAWAIGDRTRVDLFDFNFNIDGTEGLGDDRIDRSRHFRGVV GGYRLATAKPMYLEPFFYQFRNDNQVWGRQTAEENRNYYGLRLWGNVGKLRTDSFVTVQRGSFGGRDLRAYMASTSNAWS LSESGWKPRLGFHSEIASGGGGTSGTGTLRNNNFLYGNTIYFSWATFFGPVNLVTAAPTLTFSPTSKLTVNLEWETLWRQ TTSDAIYNNQARAYARTQNTGERRIGTMPRINATWNIDPNWSVTFRAEHLMAGPALEKAGYGDSTFVMGWLNFRF >Mature_554_residues SLEPLGYCLSGPASLQSVSPAPISFTQGFFTFRWGNTMQLTRLAQPATAETSFGATRRLCLAIGLALPALGFAQVQPAPA NAEQVVAEPAKAPATAAPATAKGYPLEAQGWGAKQGGNMWQVRWAEDWSYLKDPSKRKSPFDPLKYIPLNDDGDVYVSLS NELRVRSNTITNPGLIPGSHSQQQYLLRAFFGADFHVGEHFRLYTELAHGSLDGRNEGTKTGTQENNAILQQVFFDVKGR IGSADTGLRVGRQVFVDGPTTLMALRDNTDIFVTFNGARAWAIGDRTRVDLFDFNFNIDGTEGLGDDRIDRSRHFRGVVG GYRLATAKPMYLEPFFYQFRNDNQVWGRQTAEENRNYYGLRLWGNVGKLRTDSFVTVQRGSFGGRDLRAYMASTSNAWSL SESGWKPRLGFHSEIASGGGGTSGTGTLRNNNFLYGNTIYFSWATFFGPVNLVTAAPTLTFSPTSKLTVNLEWETLWRQT TSDAIYNNQARAYARTQNTGERRIGTMPRINATWNIDPNWSVTFRAEHLMAGPALEKAGYGDSTFVMGWLNFRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61502; Mature: 61371
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLEPLGYCLSGPASLQSVSPAPISFTQGFFTFRWGNTMQLTRLAQPATAETSFGATRRL CCCCCCCHHHCCCCCCCCCCCCCEEECCCEEEEECCCEEEEEECCCCCCCCCCCCHHHHH CLAIGLALPALGFAQVQPAPANAEQVVAEPAKAPATAAPATAKGYPLEAQGWGAKQGGNM HHHHHHHHHCCCHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCE WQVRWAEDWSYLKDPSKRKSPFDPLKYIPLNDDGDVYVSLSNELRVRSNTITNPGLIPGS EEEEECCCCHHHCCCCCCCCCCCCEEEEEECCCCCEEEEECCCEEEECCCCCCCCCCCCC HSQQQYLLRAFFGADFHVGEHFRLYTELAHGSLDGRNEGTKTGTQENNAILQQVFFDVKG CCHHHHHHHHHHCCCCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC RIGSADTGLRVGRQVFVDGPTTLMALRDNTDIFVTFNGARAWAIGDRTRVDLFDFNFNID CCCCCCCCCCCCCEEEECCCEEEEEEECCCEEEEEECCCEEEEECCCEEEEEEEEEEECC GTEGLGDDRIDRSRHFRGVVGGYRLATAKPMYLEPFFYQFRNDNQVWGRQTAEENRNYYG CCCCCCCCHHHHHHHHHHCCCCEEEECCCCCEECCHHEEECCCCCCCCCCCHHHCCCEEE LRLWGNVGKLRTDSFVTVQRGSFGGRDLRAYMASTSNAWSLSESGWKPRLGFHSEIASGG EEEECCCCCEECCCEEEEECCCCCCHHHHHEECCCCCCEEECCCCCCCCCCCHHHHCCCC GGTSGTGTLRNNNFLYGNTIYFSWATFFGPVNLVTAAPTLTFSPTSKLTVNLEWETLWRQ CCCCCCCEEECCCEEEECEEEEEHHHHHCCEEEEEECCEEEECCCCEEEEEEEHHHHHHH TTSDAIYNNQARAYARTQNTGERRIGTMPRINATWNIDPNWSVTFRAEHLMAGPALEKAG HHCCHHCCCCCCEEEECCCCCCHHCCCCCCCCEEEECCCCEEEEEEEHHHCCCCCHHHCC YGDSTFVMGWLNFRF CCCCEEEEEEEEECC >Mature Secondary Structure SLEPLGYCLSGPASLQSVSPAPISFTQGFFTFRWGNTMQLTRLAQPATAETSFGATRRL CCCCCCHHHCCCCCCCCCCCCCEEECCCEEEEECCCEEEEEECCCCCCCCCCCCHHHHH CLAIGLALPALGFAQVQPAPANAEQVVAEPAKAPATAAPATAKGYPLEAQGWGAKQGGNM HHHHHHHHHCCCHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCE WQVRWAEDWSYLKDPSKRKSPFDPLKYIPLNDDGDVYVSLSNELRVRSNTITNPGLIPGS EEEEECCCCHHHCCCCCCCCCCCCEEEEEECCCCCEEEEECCCEEEECCCCCCCCCCCCC HSQQQYLLRAFFGADFHVGEHFRLYTELAHGSLDGRNEGTKTGTQENNAILQQVFFDVKG CCHHHHHHHHHHCCCCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC RIGSADTGLRVGRQVFVDGPTTLMALRDNTDIFVTFNGARAWAIGDRTRVDLFDFNFNID CCCCCCCCCCCCCEEEECCCEEEEEEECCCEEEEEECCCEEEEECCCEEEEEEEEEEECC GTEGLGDDRIDRSRHFRGVVGGYRLATAKPMYLEPFFYQFRNDNQVWGRQTAEENRNYYG CCCCCCCCHHHHHHHHHHCCCCEEEECCCCCEECCHHEEECCCCCCCCCCCHHHCCCEEE LRLWGNVGKLRTDSFVTVQRGSFGGRDLRAYMASTSNAWSLSESGWKPRLGFHSEIASGG EEEECCCCCEECCCEEEEECCCCCCHHHHHEECCCCCCEEECCCCCCCCCCCHHHHCCCC GGTSGTGTLRNNNFLYGNTIYFSWATFFGPVNLVTAAPTLTFSPTSKLTVNLEWETLWRQ CCCCCCCEEECCCEEEECEEEEEHHHHHCCEEEEEECCEEEECCCCEEEEEEEHHHHHHH TTSDAIYNNQARAYARTQNTGERRIGTMPRINATWNIDPNWSVTFRAEHLMAGPALEKAG HHCCHHCCCCCCEEEECCCCCCHHCCCCCCCCEEEECCCCEEEEEEEHHHCCCCCHHHCC YGDSTFVMGWLNFRF CCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA