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The map label for this gene is 21242153

Identifier: 21242153

GI number: 21242153

Start: 1612507

End: 1613823

Strand: Reverse

Name: 21242153

Synonym: XAC1400

Alternate gene names: NA

Gene position: 1613823-1612507 (Counterclockwise)

Preceding gene: 21242154

Following gene: 21242150

Centisome position: 31.18

GC content: 63.71

Gene sequence:

>1317_bases
ATGGGTGGAATGCTTTATCAACTGCATGAGCTGACCCGCAATCTGCTAGCCCCCTGGGTACATCAGGCCCAGGCGAACGC
CAAGATGTTTTCCGACCCGGACAGCCTGTGGGCATCGCTCCCGGGCGCCGAGCGCATGGCCGCCAGCAACGAGCTGTTCC
ACCGTCTGGGCAAGGAATACGAAAAGCCGGCCTGGGCGCTCGACGATGTCGAGGTCGATGGTCATTCGCTGCCGATCATC
GAACGCGAAGTGCTGAGCAAGCCGTTCTGCCGGTTGCTGCGCTTCAAGCGTTTCAGCGACCACGTCGAACTGATCGGCAA
GATGAAGGAGCAGCCCGCCGTGCTCGTGGTTGCGCCGTTGTCCGGCCACCACGCCACGTTGCTGCGCGACACCGTGCGCA
CCCTGCTGCGCAACCACAAGGTCTATGTGACCGATTGGGTGGATGCACGCATGGTGCCGCTGGAAGCCGGCGCGTTCCGG
CTCGAGGACTACATCACCTACATCCAGGAGTTCATCCGCCATATCGGCGCCGAGCGCCTGCATGTGGTGAGCGTGTGCCA
GCCCACCGTGCCGGTGCTGGCGGCCGTGTCGCTGATGGCCAGCAACGACGAGCCCACGCCGCGCTCGCTGGTGATGATGG
GCGGGCCGATCGATGCGCGTCGTAGCCCCACCCAGGTCAACAACCTGGCCACGGAAAACGGCATCGAGTGGTTCCAGAAC
AACCTGATCCACACCGTGCCGTTCCCGTATCCGGGCCATGGCCGGCAGGTGTATCCGGGCTTTCTGCAACACGCCGGCTT
CCTGTCGATGAACCCGAACCGGCATGTGATGTCGCACTGGGATTTCTACACCGATCTGGTCAAGGGCGATCTGCAGGATG
CGCAGGCGCATCGGCAGTTCTACGACGAATACAACGCTGTGCTCGACATGCCGGCCGAGTATTACCTGGACACCATTCGC
GTGGTGTTTCAGGAGTTTCTGCTGCCGCAGGGCAAGTGGAAAGTGGACGGCCAGCTGGTCAAGCCATCGGCGATCCGCAA
GACCGCGTTGCTGAGCATCGAAGGCGAACTGGACGACATCGCCGGCCTCGGCCAGACCGAGGCGGTGCACGATCTGTGCA
CCGGCATCGACGCGGCGCACCGTCGTCATCTGGTCGTTGAAGGCGCCGGTCACTACGGCATTTTCAGCGGCCGCCGCTGG
CGCGAGGTGGTGTATCCGCAGGTCCGCGAATTCATCGCGCGCTACGATGCGGATCCGGTCGGCAGCCGCGACCTGGCCAC
CGTGACCCCGATCCGCAAACGCGGCAAACGCGCCTGA

Upstream 100 bases:

>100_bases
GACGGCGGCCATCACGCCGTGACAGCCTCAACTGTTCGCAGCCCCATTAAGGTGCAAATGCGCCAAAACCGGTATGCTGC
GCGGCAGCAAAACCGCACGG

Downstream 100 bases:

>100_bases
GTTACCCAAGAAAATCCCCGGCAATGCCGGGGATTTTCATCTCGGTCTGCCTGCAGCCGCCAGAGCGGTCATGCCAGCGA
GCAAGCACCACCACCCTGCG

Product: PHB depolymerase

Products: NA

Alternate protein names: Intracellular PHB Depolymerase; Polyhydroxyalkanoate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase; PHB Depolymerase; Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Intracellular Poly(3-Hydroxybutyrate) Depolymerase; Intracellular Polyhydroxyalkanoate Depolymerase; Polyhydroxyalkanoate Depolymerase Intracellular Subfamily; Poly(3-Hydroxyalkanoate) Depolymerase; PHB De-Polymerase Domain-Containing Protein; Poly(3-Hydroxybutyrate) Depolymerase; Intracellular PHB Depolymerase Protein; Poly-Beta-Hydroxyalkanoate Depolymerase-Like Protein; Intracellular Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Poly[D(-)-3-Hydroxybutyrate](Phb) Depolymerase; Poly-Beta-Hydroxyalkanoate/Butyrate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase Protein; Poly[D(-)-3-Hydroxyalkanoate] Depolymerase; Polyhydroxybutanoate Depolymerase; Poly-Beta-Hydroxybutyrate Depolymerase

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MGGMLYQLHELTRNLLAPWVHQAQANAKMFSDPDSLWASLPGAERMAASNELFHRLGKEYEKPAWALDDVEVDGHSLPII
EREVLSKPFCRLLRFKRFSDHVELIGKMKEQPAVLVVAPLSGHHATLLRDTVRTLLRNHKVYVTDWVDARMVPLEAGAFR
LEDYITYIQEFIRHIGAERLHVVSVCQPTVPVLAAVSLMASNDEPTPRSLVMMGGPIDARRSPTQVNNLATENGIEWFQN
NLIHTVPFPYPGHGRQVYPGFLQHAGFLSMNPNRHVMSHWDFYTDLVKGDLQDAQAHRQFYDEYNAVLDMPAEYYLDTIR
VVFQEFLLPQGKWKVDGQLVKPSAIRKTALLSIEGELDDIAGLGQTEAVHDLCTGIDAAHRRHLVVEGAGHYGIFSGRRW
REVVYPQVREFIARYDADPVGSRDLATVTPIRKRGKRA

Sequences:

>Translated_438_residues
MGGMLYQLHELTRNLLAPWVHQAQANAKMFSDPDSLWASLPGAERMAASNELFHRLGKEYEKPAWALDDVEVDGHSLPII
EREVLSKPFCRLLRFKRFSDHVELIGKMKEQPAVLVVAPLSGHHATLLRDTVRTLLRNHKVYVTDWVDARMVPLEAGAFR
LEDYITYIQEFIRHIGAERLHVVSVCQPTVPVLAAVSLMASNDEPTPRSLVMMGGPIDARRSPTQVNNLATENGIEWFQN
NLIHTVPFPYPGHGRQVYPGFLQHAGFLSMNPNRHVMSHWDFYTDLVKGDLQDAQAHRQFYDEYNAVLDMPAEYYLDTIR
VVFQEFLLPQGKWKVDGQLVKPSAIRKTALLSIEGELDDIAGLGQTEAVHDLCTGIDAAHRRHLVVEGAGHYGIFSGRRW
REVVYPQVREFIARYDADPVGSRDLATVTPIRKRGKRA
>Mature_437_residues
GGMLYQLHELTRNLLAPWVHQAQANAKMFSDPDSLWASLPGAERMAASNELFHRLGKEYEKPAWALDDVEVDGHSLPIIE
REVLSKPFCRLLRFKRFSDHVELIGKMKEQPAVLVVAPLSGHHATLLRDTVRTLLRNHKVYVTDWVDARMVPLEAGAFRL
EDYITYIQEFIRHIGAERLHVVSVCQPTVPVLAAVSLMASNDEPTPRSLVMMGGPIDARRSPTQVNNLATENGIEWFQNN
LIHTVPFPYPGHGRQVYPGFLQHAGFLSMNPNRHVMSHWDFYTDLVKGDLQDAQAHRQFYDEYNAVLDMPAEYYLDTIRV
VFQEFLLPQGKWKVDGQLVKPSAIRKTALLSIEGELDDIAGLGQTEAVHDLCTGIDAAHRRHLVVEGAGHYGIFSGRRWR
EVVYPQVREFIARYDADPVGSRDLATVTPIRKRGKRA

Specific function: Unknown

COG id: COG4553

COG function: function code I; Poly-beta-hydroxyalkanoate depolymerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49666; Mature: 49535

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGMLYQLHELTRNLLAPWVHQAQANAKMFSDPDSLWASLPGAERMAASNELFHRLGKEY
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHH
EKPAWALDDVEVDGHSLPIIEREVLSKPFCRLLRFKRFSDHVELIGKMKEQPAVLVVAPL
CCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
SGHHATLLRDTVRTLLRNHKVYVTDWVDARMVPLEAGAFRLEDYITYIQEFIRHIGAERL
CCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCE
HVVSVCQPTVPVLAAVSLMASNDEPTPRSLVMMGGPIDARRSPTQVNNLATENGIEWFQN
EEHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHC
NLIHTVPFPYPGHGRQVYPGFLQHAGFLSMNPNRHVMSHWDFYTDLVKGDLQDAQAHRQF
CCEEECCCCCCCCCCEECCHHHHHCCCEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
YDEYNAVLDMPAEYYLDTIRVVFQEFLLPQGKWKVDGQLVKPSAIRKTALLSIEGELDDI
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEECCEEECCHHHHHEEEEEECCCHHHH
AGLGQTEAVHDLCTGIDAAHRRHLVVEGAGHYGIFSGRRWREVVYPQVREFIARYDADPV
HCCCCHHHHHHHHHCHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
GSRDLATVTPIRKRGKRA
CCCCCCEECHHHHCCCCC
>Mature Secondary Structure 
GGMLYQLHELTRNLLAPWVHQAQANAKMFSDPDSLWASLPGAERMAASNELFHRLGKEY
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHH
EKPAWALDDVEVDGHSLPIIEREVLSKPFCRLLRFKRFSDHVELIGKMKEQPAVLVVAPL
CCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
SGHHATLLRDTVRTLLRNHKVYVTDWVDARMVPLEAGAFRLEDYITYIQEFIRHIGAERL
CCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCE
HVVSVCQPTVPVLAAVSLMASNDEPTPRSLVMMGGPIDARRSPTQVNNLATENGIEWFQN
EEHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHC
NLIHTVPFPYPGHGRQVYPGFLQHAGFLSMNPNRHVMSHWDFYTDLVKGDLQDAQAHRQF
CCEEECCCCCCCCCCEECCHHHHHCCCEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
YDEYNAVLDMPAEYYLDTIRVVFQEFLLPQGKWKVDGQLVKPSAIRKTALLSIEGELDDI
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEECCEEECCHHHHHEEEEEECCCHHHH
AGLGQTEAVHDLCTGIDAAHRRHLVVEGAGHYGIFSGRRWREVVYPQVREFIARYDADPV
HCCCCHHHHHHHHHCHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
GSRDLATVTPIRKRGKRA
CCCCCCEECHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA