Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21242148
Identifier: 21242148
GI number: 21242148
Start: 1606318
End: 1606992
Strand: Reverse
Name: 21242148
Synonym: XAC1395
Alternate gene names: NA
Gene position: 1606992-1606318 (Counterclockwise)
Preceding gene: 21242150
Following gene: 21242147
Centisome position: 31.05
GC content: 64.0
Gene sequence:
>675_bases ATGTCCGAATCCCCTACTCCGCACGTCCGCCCTTCCCTGCAACGGGTCTTTCTGACCGGGTTGCTCACCTTGCTACCGGT CTGGTTGACCTGGGTGGTGGTGAAGTTCGTTTTCTCGCTGCTTTCGGGCATCAGCAGCCCGTGGGTGGTGCCGTTGTCCG AACGCATCGCCGCCTCGTTCCCCGATTATCTGGGCTGGTTCAAGGCGCTGTGGGTGCAGAACACCATCGCCCTGATCGCC ACGGTAGCGGTCATCCTGTTCGTCGGGATCCTGAGCCGGCGCGTGATCGGCCAGCGCTTGCTGCGCTGGTTCGAGGCCAT CATGCGGCGCATTCCACTGGCCAGCGTGGTCTACGACAGCGCGCGCAAGCTGCTGGACATTTTGCAGACCCAGCCCGGCA GCACCCAGCGCGTGGTGCTGATCGATTTCCCGCATCGCGACATGAAATCGGTGGGCCTGGTCACCCGCGTGATCAAGGAA CAGGGCACCGGCCGCGAGCTGGCCGCAGTCTACGTGCCCACCACGCCCAACCCCACCTCCGGCTACCTGGAAATCGTGCC GGTGGAGCTGCTCACGCCTACCGACTGGAGCGTGGATCAGGCGATGAGCTTCATCATTTCCGGTGGCGCCGTGGCGCCCG AATCGGTTCCCTTCACCCGAACTGCGGATCGCTGA
Upstream 100 bases:
>100_bases AGGCTTGAGGCACGCGAAACACTTTTGCCAATCGCGAATGCCTGCTGCCAAACCCCGGCCCCAGCTCCACCGAGCGTGGC CGAATGCCTACACTATGCCG
Downstream 100 bases:
>100_bases CACCATGAACCATGTGCGCACCCTCGATGATCGTGCGGTCCGCCTGTTCATTGCACTGGCGGCCTTCTTCTGCGTCAACG CGGCGCTGGCCGAGTTCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MSESPTPHVRPSLQRVFLTGLLTLLPVWLTWVVVKFVFSLLSGISSPWVVPLSERIAASFPDYLGWFKALWVQNTIALIA TVAVILFVGILSRRVIGQRLLRWFEAIMRRIPLASVVYDSARKLLDILQTQPGSTQRVVLIDFPHRDMKSVGLVTRVIKE QGTGRELAAVYVPTTPNPTSGYLEIVPVELLTPTDWSVDQAMSFIISGGAVAPESVPFTRTADR
Sequences:
>Translated_224_residues MSESPTPHVRPSLQRVFLTGLLTLLPVWLTWVVVKFVFSLLSGISSPWVVPLSERIAASFPDYLGWFKALWVQNTIALIA TVAVILFVGILSRRVIGQRLLRWFEAIMRRIPLASVVYDSARKLLDILQTQPGSTQRVVLIDFPHRDMKSVGLVTRVIKE QGTGRELAAVYVPTTPNPTSGYLEIVPVELLTPTDWSVDQAMSFIISGGAVAPESVPFTRTADR >Mature_223_residues SESPTPHVRPSLQRVFLTGLLTLLPVWLTWVVVKFVFSLLSGISSPWVVPLSERIAASFPDYLGWFKALWVQNTIALIAT VAVILFVGILSRRVIGQRLLRWFEAIMRRIPLASVVYDSARKLLDILQTQPGSTQRVVLIDFPHRDMKSVGLVTRVIKEQ GTGRELAAVYVPTTPNPTSGYLEIVPVELLTPTDWSVDQAMSFIISGGAVAPESVPFTRTADR
Specific function: Unknown
COG id: COG2928
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24896; Mature: 24764
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESPTPHVRPSLQRVFLTGLLTLLPVWLTWVVVKFVFSLLSGISSPWVVPLSERIAASF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHCC PDYLGWFKALWVQNTIALIATVAVILFVGILSRRVIGQRLLRWFEAIMRRIPLASVVYDS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH ARKLLDILQTQPGSTQRVVLIDFPHRDMKSVGLVTRVIKEQGTGRELAAVYVPTTPNPTS HHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC GYLEIVPVELLTPTDWSVDQAMSFIISGGAVAPESVPFTRTADR CEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SESPTPHVRPSLQRVFLTGLLTLLPVWLTWVVVKFVFSLLSGISSPWVVPLSERIAASF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHCC PDYLGWFKALWVQNTIALIATVAVILFVGILSRRVIGQRLLRWFEAIMRRIPLASVVYDS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH ARKLLDILQTQPGSTQRVVLIDFPHRDMKSVGLVTRVIKEQGTGRELAAVYVPTTPNPTS HHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC GYLEIVPVELLTPTDWSVDQAMSFIISGGAVAPESVPFTRTADR CEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA