Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21242130
Identifier: 21242130
GI number: 21242130
Start: 1585161
End: 1586411
Strand: Reverse
Name: 21242130
Synonym: XAC1377
Alternate gene names: NA
Gene position: 1586411-1585161 (Counterclockwise)
Preceding gene: 21242131
Following gene: 21242129
Centisome position: 30.65
GC content: 66.35
Gene sequence:
>1251_bases ATGAGCGAGGGCAGAATTGCCGTGGTCGGCAGCGGAGTCGCCGGCCTCGGTGCAGCGTGGCTGTTGTCGCGGCGCTACGA GGTGACCTTGTTCGAGGCCGCCGATTATCTGGGCGGGCATACGCACACGCACGACATCGACCTGGAAGGTCAGCGCTATG CGGTGGACAGCGGCTTCATTGTGTTCAATCCGCAGCATTACCCGCTGCTCACGCGCATGTTCGCCGAGCTGGACGTGGCC GCGCAGCCGACCACGATGAGCTTTTCGGTCCACGATGCACGCAGCGGGCTCGAATACAACGCCGGCAGCCTGAGCGGATT GTTCTGCCAGCGCCGCAATCTGCTCAGCCCGCGCTTCTGGGGCATGCTGGCCGACCTGCGCCGCTTCTATCGCCAGGCAC CGGCGGTGCTGCACAGCGACGAGCGTTTCAGCACGCTGGGCGCGTATCTGCAGCGGCACGACTATTCGGATGCGTTCCGC GACCAGCACCTGGTGCCGATGGCGTCCGCGCTGTGGTCCTCGCCTTCGCAGACCATTCTCGAATTTCCCATGGGCCAGCT GATCGGCTTCATGGCCAATCACCATATGCTGCAACTGAGCGGGCGCCCGCAGTGGCAGGTGGTGCGTGGCGGGTCCAACA GCTACGTGCGTGCGCTGCGGCGACGCTGGCAGGTGATCGAGCGCCTGTCCACGCCGGTACAGGCAATCCGCCGCACGCCC AATGGCGTGGTGCTGAAGGCTTCGCGTTGCGAGGAACATTTCGACCACGTGGTGCTGGCCTGCCATGCCGACGATGCGCT GGGTTTGCTCAGCGACGCCACGCCGGCCGAACGACACATCCTCGGTGGCATCACCTACCAGGACAACGACACCGTGCTGC ACACCGATGCCAGCGTGCTACCGCGCGACCGTCGCGCCTGGGCAGCATGGAACGCGCACGTGCCGGCCGACCCGGACGCC GCCTGCACGGTGAGCTACTGGATGAACGCACTGCAGTCGATCGCGTCACCGCAGCCGTTCATCGTCAGCCTCAATCGCAA TCACGAGATCGACCCCGGCAAGGTGCTGCGGCGCATGCGCTACCGCCATCCGGTACAGAACGCGGCGGCAGTGGCGGCGC AAGCGCGCAAGGCCGAGATCCAGGGCGTGCAGCACACCTGGTTTGCCGGCGCCGCGTGGGGCTTCGGTTTCCACGAAGAC GGCCTGCGCAGCGGCGTGGACGTCGCGCATGGCCTGGGAGTGCACTGGTGA
Upstream 100 bases:
>100_bases TGACCTGGTACGGACTCACCGCGATGTCGTGGGTGGGGCTGGTGTGGGACCTCAAGCCGATGCCGAAGCTGCTCACCCAG CGCGCCGAACGGGTGAAGCG
Downstream 100 bases:
>100_bases TGCAGCTGCTGCGCGACGCCCACCACGACGCGGTGCCGTTGCCCCCTACCGAGGGCAGCGGCGCCGGTCGCGTGGCGAGG CCATTGCGCAGCGCGATCTA
Product: dehydrogenase
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Amine Oxidase Flavin-Containing; Dehydrogenase; Amine Oxidoreductase; Flavin Containing Amine Oxidoreductase; Flavin-Containing Amine Oxidase; Amino-Oxidase; Oxidoreductase; Amine Oxidase Flavin-Containing Superfamily; FAD-Dependent Oxidoreductase; Amino Oxidase; Flavin Containing Amine Oxidoreductase Protein; Amine Oxidase Flavin-Containing Protein; Amine Oxidase Protein; Amine OxidaseFAD Dependent Oxidoreductase; Amine-Oxidase; Fad Dependent Oxidoreductase; Flavin Containing Amine Oxidoreductas; Lipoprotein
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MSEGRIAVVGSGVAGLGAAWLLSRRYEVTLFEAADYLGGHTHTHDIDLEGQRYAVDSGFIVFNPQHYPLLTRMFAELDVA AQPTTMSFSVHDARSGLEYNAGSLSGLFCQRRNLLSPRFWGMLADLRRFYRQAPAVLHSDERFSTLGAYLQRHDYSDAFR DQHLVPMASALWSSPSQTILEFPMGQLIGFMANHHMLQLSGRPQWQVVRGGSNSYVRALRRRWQVIERLSTPVQAIRRTP NGVVLKASRCEEHFDHVVLACHADDALGLLSDATPAERHILGGITYQDNDTVLHTDASVLPRDRRAWAAWNAHVPADPDA ACTVSYWMNALQSIASPQPFIVSLNRNHEIDPGKVLRRMRYRHPVQNAAAVAAQARKAEIQGVQHTWFAGAAWGFGFHED GLRSGVDVAHGLGVHW
Sequences:
>Translated_416_residues MSEGRIAVVGSGVAGLGAAWLLSRRYEVTLFEAADYLGGHTHTHDIDLEGQRYAVDSGFIVFNPQHYPLLTRMFAELDVA AQPTTMSFSVHDARSGLEYNAGSLSGLFCQRRNLLSPRFWGMLADLRRFYRQAPAVLHSDERFSTLGAYLQRHDYSDAFR DQHLVPMASALWSSPSQTILEFPMGQLIGFMANHHMLQLSGRPQWQVVRGGSNSYVRALRRRWQVIERLSTPVQAIRRTP NGVVLKASRCEEHFDHVVLACHADDALGLLSDATPAERHILGGITYQDNDTVLHTDASVLPRDRRAWAAWNAHVPADPDA ACTVSYWMNALQSIASPQPFIVSLNRNHEIDPGKVLRRMRYRHPVQNAAAVAAQARKAEIQGVQHTWFAGAAWGFGFHED GLRSGVDVAHGLGVHW >Mature_415_residues SEGRIAVVGSGVAGLGAAWLLSRRYEVTLFEAADYLGGHTHTHDIDLEGQRYAVDSGFIVFNPQHYPLLTRMFAELDVAA QPTTMSFSVHDARSGLEYNAGSLSGLFCQRRNLLSPRFWGMLADLRRFYRQAPAVLHSDERFSTLGAYLQRHDYSDAFRD QHLVPMASALWSSPSQTILEFPMGQLIGFMANHHMLQLSGRPQWQVVRGGSNSYVRALRRRWQVIERLSTPVQAIRRTPN GVVLKASRCEEHFDHVVLACHADDALGLLSDATPAERHILGGITYQDNDTVLHTDASVLPRDRRAWAAWNAHVPADPDAA CTVSYWMNALQSIASPQPFIVSLNRNHEIDPGKVLRRMRYRHPVQNAAAVAAQARKAEIQGVQHTWFAGAAWGFGFHEDG LRSGVDVAHGLGVHW
Specific function: Unknown
COG id: COG2907
COG function: function code R; Predicted NAD/FAD-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46402; Mature: 46271
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEGRIAVVGSGVAGLGAAWLLSRRYEVTLFEAADYLGGHTHTHDIDLEGQRYAVDSGFI CCCCCEEEEECCCHHHHHHHHHHCCCEEEEEEHHHHCCCCCCCCEECCCCCEEEEECCEE VFNPQHYPLLTRMFAELDVAAQPTTMSFSVHDARSGLEYNAGSLSGLFCQRRNLLSPRFW EECCCCCHHHHHHHHHHCCCCCCCEEEEEEHHHHCCCCCCCCCHHHHHHHHHCCCCHHHH GMLADLRRFYRQAPAVLHSDERFSTLGAYLQRHDYSDAFRDQHLVPMASALWSSPSQTIL HHHHHHHHHHHHCCHHEECCHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHCCCCHHHH EFPMGQLIGFMANHHMLQLSGRPQWQVVRGGSNSYVRALRRRWQVIERLSTPVQAIRRTP HCCHHHHHHHHHCCEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC NGVVLKASRCEEHFDHVVLACHADDALGLLSDATPAERHILGGITYQDNDTVLHTDASVL CCEEEEHHHHHHCCCEEEEEEECCCCHHHHCCCCCCHHHEECCEEECCCCEEEECCHHHC PRDRRAWAAWNAHVPADPDAACTVSYWMNALQSIASPQPFIVSLNRNHEIDPGKVLRRMR CCCCCHHEEECCCCCCCCCCCEEHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH YRHPVQNAAAVAAQARKAEIQGVQHTWFAGAAWGFGFHEDGLRSGVDVAHGLGVHW HHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHCCCHHHHCCCCCC >Mature Secondary Structure SEGRIAVVGSGVAGLGAAWLLSRRYEVTLFEAADYLGGHTHTHDIDLEGQRYAVDSGFI CCCCEEEEECCCHHHHHHHHHHCCCEEEEEEHHHHCCCCCCCCEECCCCCEEEEECCEE VFNPQHYPLLTRMFAELDVAAQPTTMSFSVHDARSGLEYNAGSLSGLFCQRRNLLSPRFW EECCCCCHHHHHHHHHHCCCCCCCEEEEEEHHHHCCCCCCCCCHHHHHHHHHCCCCHHHH GMLADLRRFYRQAPAVLHSDERFSTLGAYLQRHDYSDAFRDQHLVPMASALWSSPSQTIL HHHHHHHHHHHHCCHHEECCHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHCCCCHHHH EFPMGQLIGFMANHHMLQLSGRPQWQVVRGGSNSYVRALRRRWQVIERLSTPVQAIRRTP HCCHHHHHHHHHCCEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC NGVVLKASRCEEHFDHVVLACHADDALGLLSDATPAERHILGGITYQDNDTVLHTDASVL CCEEEEHHHHHHCCCEEEEEEECCCCHHHHCCCCCCHHHEECCEEECCCCEEEECCHHHC PRDRRAWAAWNAHVPADPDAACTVSYWMNALQSIASPQPFIVSLNRNHEIDPGKVLRRMR CCCCCHHEEECCCCCCCCCCCEEHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH YRHPVQNAAAVAAQARKAEIQGVQHTWFAGAAWGFGFHEDGLRSGVDVAHGLGVHW HHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA