Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21242129
Identifier: 21242129
GI number: 21242129
Start: 1584277
End: 1585089
Strand: Reverse
Name: 21242129
Synonym: XAC1376
Alternate gene names: NA
Gene position: 1585089-1584277 (Counterclockwise)
Preceding gene: 21242130
Following gene: 77748582
Centisome position: 30.63
GC content: 64.82
Gene sequence:
>813_bases GTGGCGAGGCCATTGCGCAGCGCGATCTACACCGGCTGGGTGCGGCACCGGCGCTTCATGCCCAAGGCGCTGCATTTCCG CTATCGCCTGTTCCTGATGTATCTGGATCTGTCCGAGCTGGATCAGGTGTTCGCACGACGCTGGTTGTGGTCGGTGGGGC GCGCCAATCTGGCGCAGTTCCGGCGCAGCGACTATCTGGGCGATGCGAGCATTCCGCTGGACCAGGCGGTGCGCGACTGC GTGCACACGCACACCGGCGAGCGCCCCGAGGGCGCGATCCGGCTGCTGACGCATCTGCGCTATTTCGGTCACGTGTTCAA CCCGGTCAGCTTCTACTATTGCTTCGATCGCCACGACAGCCTGCGCTGGATCGTGGCAGAAATCACCAACACGCCCTGGC AGCAACGCCATACCTACGTGCTGCCGGTGGCGCAGGCGCGCACGCATCGCGATGTGCATGCGTGGCGCTTCGACAAGCGC TTCCACGTTTCGCCGTTCATGGGCATGCAGCAGCGCTACGACTGGCGCTTCAGCGTGCCGGATGCGCAGTTGCGTGTGCA TATGGATGTGCTGGACGCCGTTGGCGACGATGCCGGCGGTGCCATCGACAACAGCAGTACGCGCCGCTTCGACGCCACCT TGGTGCTGCAACGTCAACCGCTCACCGCGCGCAACCTGGCGTGCACATTGCTGGCTTATCCGTTGATGACGGTGTGGGTG GTGATCGCCATCCACTGGCAGGCCTTGCGCCTGTGGCTGCGCGGCAACCCGGTCCACGACCACCCTCACCCGCCTGTGCG AGAACCCCGATGA
Upstream 100 bases:
>100_bases TCGCGCATGGCCTGGGAGTGCACTGGTGATGCAGCTGCTGCGCGACGCCCACCACGACGCGGTGCCGTTGCCCCCTACCG AGGGCAGCGGCGCCGGTCGC
Downstream 100 bases:
>100_bases ACGCCACGTCCCTGCCCGATCACGCTGCGCCGCGCGCGGCCTCCTGGACGGACCGTCTGCTGCGCAAGCGCCTGCTGGCC ACGCTTGGGCAACTGCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MARPLRSAIYTGWVRHRRFMPKALHFRYRLFLMYLDLSELDQVFARRWLWSVGRANLAQFRRSDYLGDASIPLDQAVRDC VHTHTGERPEGAIRLLTHLRYFGHVFNPVSFYYCFDRHDSLRWIVAEITNTPWQQRHTYVLPVAQARTHRDVHAWRFDKR FHVSPFMGMQQRYDWRFSVPDAQLRVHMDVLDAVGDDAGGAIDNSSTRRFDATLVLQRQPLTARNLACTLLAYPLMTVWV VIAIHWQALRLWLRGNPVHDHPHPPVREPR
Sequences:
>Translated_270_residues MARPLRSAIYTGWVRHRRFMPKALHFRYRLFLMYLDLSELDQVFARRWLWSVGRANLAQFRRSDYLGDASIPLDQAVRDC VHTHTGERPEGAIRLLTHLRYFGHVFNPVSFYYCFDRHDSLRWIVAEITNTPWQQRHTYVLPVAQARTHRDVHAWRFDKR FHVSPFMGMQQRYDWRFSVPDAQLRVHMDVLDAVGDDAGGAIDNSSTRRFDATLVLQRQPLTARNLACTLLAYPLMTVWV VIAIHWQALRLWLRGNPVHDHPHPPVREPR >Mature_269_residues ARPLRSAIYTGWVRHRRFMPKALHFRYRLFLMYLDLSELDQVFARRWLWSVGRANLAQFRRSDYLGDASIPLDQAVRDCV HTHTGERPEGAIRLLTHLRYFGHVFNPVSFYYCFDRHDSLRWIVAEITNTPWQQRHTYVLPVAQARTHRDVHAWRFDKRF HVSPFMGMQQRYDWRFSVPDAQLRVHMDVLDAVGDDAGGAIDNSSTRRFDATLVLQRQPLTARNLACTLLAYPLMTVWVV IAIHWQALRLWLRGNPVHDHPHPPVREPR
Specific function: Unknown
COG id: COG3496
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31959; Mature: 31828
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPLRSAIYTGWVRHRRFMPKALHFRYRLFLMYLDLSELDQVFARRWLWSVGRANLAQF CCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCHHHHHHH RRSDYLGDASIPLDQAVRDCVHTHTGERPEGAIRLLTHLRYFGHVFNPVSFYYCFDRHDS HHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC LRWIVAEITNTPWQQRHTYVLPVAQARTHRDVHAWRFDKRFHVSPFMGMQQRYDWRFSVP CEEEEEECCCCCHHHCCCEEEEEHHHHCCCCHHHHCCCCEECCCHHHCHHHHCCEEECCC DAQLRVHMDVLDAVGDDAGGAIDNSSTRRFDATLVLQRQPLTARNLACTLLAYPLMTVWV CHHEEEHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH VIAIHWQALRLWLRGNPVHDHPHPPVREPR HHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure ARPLRSAIYTGWVRHRRFMPKALHFRYRLFLMYLDLSELDQVFARRWLWSVGRANLAQF CCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCHHHHHHH RRSDYLGDASIPLDQAVRDCVHTHTGERPEGAIRLLTHLRYFGHVFNPVSFYYCFDRHDS HHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC LRWIVAEITNTPWQQRHTYVLPVAQARTHRDVHAWRFDKRFHVSPFMGMQQRYDWRFSVP CEEEEEECCCCCHHHCCCEEEEEHHHHCCCCHHHHCCCCEECCCHHHCHHHHCCEEECCC DAQLRVHMDVLDAVGDDAGGAIDNSSTRRFDATLVLQRQPLTARNLACTLLAYPLMTVWV CHHEEEHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH VIAIHWQALRLWLRGNPVHDHPHPPVREPR HHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA