| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is pcp [H]
Identifier: 21241323
GI number: 21241323
Start: 652985
End: 654946
Strand: Direct
Name: pcp [H]
Synonym: XAC0552
Alternate gene names: 21241323
Gene position: 652985-654946 (Clockwise)
Preceding gene: 21241321
Following gene: 77748536
Centisome position: 12.62
GC content: 66.72
Gene sequence:
>1962_bases ATGATCGCGCCGTTGGTCGCGAGCGGTCGTGCGCGCCCCTGCGATGCCATTCGGCCTCGCTCACTGCTGTGCCCTCCGGA GAGATCCATGCTTACTCGCATCCGCTGTCGGCCGCTGCTGGCTGCCGTGTTGTCCGCTTCGCTGTTCGCCTTCGGCAGCG CCAACGCTGCCACAACCGTCCCCGATGCCCGGATTGACGCGATGACGGCGAGCTTGCGCGCAGCGCCCGTGTCCTTCGAC GTGCATCTGCCATCACGCGACCAGGTGGCGCTGGACGCGCTGCTGGCCGACATCCAGGACCCGCTGTCGCCGCAGTACCA CAAGTGGCTGTCGGCGGCCGACTTCCAGCGGCGTTTTGGTCCGGCGCCAGCGCAGCTCGCGCAGGTGCGCGCGGCCCTGC AGGCCGCACACATGACCGTGGTGCAGCAGGGGCCAACCCTGCATGTCAGCGCGAATGCAGACAGCGTGGAGCGGCTGTTC GCCGCGCCGTTGGTCGCCGATCTGAAGGCCGGCCAGCAGGTGCGCCTGACGGCCGCCGCTCCACTGCAGCTGCCGGCCGC GCTGCGTGCCAAGGGTGTCACCGTCACCGGCCTGACCCGCGGCCTGCCGCCGGCACACATGAACTCGCGCTTGGTCGCCA GCGATCCCAGCAATCGCTATGGCGATGGCACCACCAGCTATTGGTACAACGATCTCAAGCAGGCCTACGGCTATCCGTCC TACCAGACGATGGTCGGCGCGCCCGGGCAGCAACGGCGGCTCGACGGCAGCGGCAGCACGATCGCTATCCTGATCGGCAG CGACGTGCTGGATTCGGATATCGCCACGATGTTCGACCACGAGCACTTCAGCCGCTACGCCGGCAACCATGCCAATCCGA CACTGTATGCACGCCGCTATGTGGCCGGTGCCAAGCCCGGGGTGCAGGATGGCAATCGCGCTGCGGCGCGTGAGGCGACG CTCGATGTAGACATGGCGTTGGGCGGCGCACCGGGCGCGCATGTGCTGCTGTACGTGATCCCCGATCTCTCCATCGATTC CATCCTGGCCGGCTATCGACAGATCGTGCAGGACAATGAGGCGGACGTGGTCAGCTCCTCGTTCGGGCTCTGCGAACAGG TCTTCACCGCGGCCTACAACGGGAATGACGCCACCTCCATCCTTGGCCTGTTCGATTCGGTCTTCAAGCAAGGCAATGCG CAGGGCATCAGCTTCGTCGCCTCCAGCGGCGACAACGCCGGCCTGGAATGCCCGGACACGCAGTACCTGGTGGAGGGCAA GAGCGGCCGTTACATTCCCAGTGTGGAATGGCCCGCCGCTGATGCGCATGTAACCGCGGTCGGTGGCGGCAACCTGCTCA CTGCCTACAAGAAGGGCAGCCTGGATTCGACCTACCTCAGCGAAAGCGCGTTTGCCGACCCGTTGCAGGCCGAGGACCCA TATGGCGTCGGCGCGCTGCTCAGCGGCGGCTACTGGGGTGCCGGTGGCGGCGTCAGCACGCTGTTCCAGCGTCCGGCATA CCAGCTGCGTGCGCTGGGCGGCACGCGCACCTCGATGCGCGCATTGCCCGATGTCGGCATGCTGGTCGGTGGTTGCCCGG GGATCGCCGTGCATCCCTGCCAGCAGGGCACCAGCTCGGTGTCCATTTACGTGGCCGGTGCCATCACCAAGGTGATCGGC ACCAGCGTGGCGGCGCCGGAGTTCGCCAGCGTGGCCGCGTTGCTGGTGCAGAAGCAGGGCCGGCAAGGCAATCTCAACGA TTACCTGTATCGCCTGGCTGCCAACGGACCGGAGGCCTACCACCGCGGTATCCCCGGCAATAACGGGGTCGTCAGCAACG ACGTACCGATCGCCGGCAAGTACAACTACACCACCGGCCTGGGAACCCCGATCGTGCGGCTGATGATCGGCGCGCTGGAC GCGGCGCCTGCAGGCATTCCGCGTTCTCCCAGCAATCCGTAA
Upstream 100 bases:
>100_bases CTCGGCCTTCCCGTGGTCTGTGGCAGCGGCCAGCCGTGCGTATCGCGGCCGCTACGGCCATCGCTCGCAGCCGGTACCTG CTTCCTGTTTCCGTGTCGAC
Downstream 100 bases:
>100_bases ACCCAGCGCGGTTGAAGGCATCGGCGTCGTGGCAACGCCGCCGATGCAACGACGATCACGCCGTGGTCGATCAGCTGTGT TGTCGGCCTGCAGCGCAGGG
Product: proteinase
Products: NA
Alternate protein names: Pepstatin-insensitive carboxyl proteinase; Pseudomonapepsin [H]
Number of amino acids: Translated: 653; Mature: 653
Protein sequence:
>653_residues MIAPLVASGRARPCDAIRPRSLLCPPERSMLTRIRCRPLLAAVLSASLFAFGSANAATTVPDARIDAMTASLRAAPVSFD VHLPSRDQVALDALLADIQDPLSPQYHKWLSAADFQRRFGPAPAQLAQVRAALQAAHMTVVQQGPTLHVSANADSVERLF AAPLVADLKAGQQVRLTAAAPLQLPAALRAKGVTVTGLTRGLPPAHMNSRLVASDPSNRYGDGTTSYWYNDLKQAYGYPS YQTMVGAPGQQRRLDGSGSTIAILIGSDVLDSDIATMFDHEHFSRYAGNHANPTLYARRYVAGAKPGVQDGNRAAAREAT LDVDMALGGAPGAHVLLYVIPDLSIDSILAGYRQIVQDNEADVVSSSFGLCEQVFTAAYNGNDATSILGLFDSVFKQGNA QGISFVASSGDNAGLECPDTQYLVEGKSGRYIPSVEWPAADAHVTAVGGGNLLTAYKKGSLDSTYLSESAFADPLQAEDP YGVGALLSGGYWGAGGGVSTLFQRPAYQLRALGGTRTSMRALPDVGMLVGGCPGIAVHPCQQGTSSVSIYVAGAITKVIG TSVAAPEFASVAALLVQKQGRQGNLNDYLYRLAANGPEAYHRGIPGNNGVVSNDVPIAGKYNYTTGLGTPIVRLMIGALD AAPAGIPRSPSNP
Sequences:
>Translated_653_residues MIAPLVASGRARPCDAIRPRSLLCPPERSMLTRIRCRPLLAAVLSASLFAFGSANAATTVPDARIDAMTASLRAAPVSFD VHLPSRDQVALDALLADIQDPLSPQYHKWLSAADFQRRFGPAPAQLAQVRAALQAAHMTVVQQGPTLHVSANADSVERLF AAPLVADLKAGQQVRLTAAAPLQLPAALRAKGVTVTGLTRGLPPAHMNSRLVASDPSNRYGDGTTSYWYNDLKQAYGYPS YQTMVGAPGQQRRLDGSGSTIAILIGSDVLDSDIATMFDHEHFSRYAGNHANPTLYARRYVAGAKPGVQDGNRAAAREAT LDVDMALGGAPGAHVLLYVIPDLSIDSILAGYRQIVQDNEADVVSSSFGLCEQVFTAAYNGNDATSILGLFDSVFKQGNA QGISFVASSGDNAGLECPDTQYLVEGKSGRYIPSVEWPAADAHVTAVGGGNLLTAYKKGSLDSTYLSESAFADPLQAEDP YGVGALLSGGYWGAGGGVSTLFQRPAYQLRALGGTRTSMRALPDVGMLVGGCPGIAVHPCQQGTSSVSIYVAGAITKVIG TSVAAPEFASVAALLVQKQGRQGNLNDYLYRLAANGPEAYHRGIPGNNGVVSNDVPIAGKYNYTTGLGTPIVRLMIGALD AAPAGIPRSPSNP >Mature_653_residues MIAPLVASGRARPCDAIRPRSLLCPPERSMLTRIRCRPLLAAVLSASLFAFGSANAATTVPDARIDAMTASLRAAPVSFD VHLPSRDQVALDALLADIQDPLSPQYHKWLSAADFQRRFGPAPAQLAQVRAALQAAHMTVVQQGPTLHVSANADSVERLF AAPLVADLKAGQQVRLTAAAPLQLPAALRAKGVTVTGLTRGLPPAHMNSRLVASDPSNRYGDGTTSYWYNDLKQAYGYPS YQTMVGAPGQQRRLDGSGSTIAILIGSDVLDSDIATMFDHEHFSRYAGNHANPTLYARRYVAGAKPGVQDGNRAAAREAT LDVDMALGGAPGAHVLLYVIPDLSIDSILAGYRQIVQDNEADVVSSSFGLCEQVFTAAYNGNDATSILGLFDSVFKQGNA QGISFVASSGDNAGLECPDTQYLVEGKSGRYIPSVEWPAADAHVTAVGGGNLLTAYKKGSLDSTYLSESAFADPLQAEDP YGVGALLSGGYWGAGGGVSTLFQRPAYQLRALGGTRTSMRALPDVGMLVGGCPGIAVHPCQQGTSSVSIYVAGAITKVIG TSVAAPEFASVAALLVQKQGRQGNLNDYLYRLAANGPEAYHRGIPGNNGVVSNDVPIAGKYNYTTGLGTPIVRLMIGALD AAPAGIPRSPSNP
Specific function: Unknown
COG id: COG4934
COG function: function code O; Predicted protease
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S53 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015366 - InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR009020 [H]
Pfam domain/function: PF00082 Peptidase_S8; PF09286 Pro-kuma_activ [H]
EC number: =3.4.21.100 [H]
Molecular weight: Translated: 68332; Mature: 68332
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAPLVASGRARPCDAIRPRSLLCPPERSMLTRIRCRPLLAAVLSASLFAFGSANAATTV CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PDARIDAMTASLRAAPVSFDVHLPSRDQVALDALLADIQDPLSPQYHKWLSAADFQRRFG CCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC PAPAQLAQVRAALQAAHMTVVQQGPTLHVSANADSVERLFAAPLVADLKAGQQVRLTAAA CCHHHHHHHHHHHHHHHHHHEECCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEEC PLQLPAALRAKGVTVTGLTRGLPPAHMNSRLVASDPSNRYGDGTTSYWYNDLKQAYGYPS CCCCCHHHHHCCCEEEEHHCCCCCHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCC YQTMVGAPGQQRRLDGSGSTIAILIGSDVLDSDIATMFDHEHFSRYAGNHANPTLYARRY HHHEECCCCHHCEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH VAGAKPGVQDGNRAAAREATLDVDMALGGAPGAHVLLYVIPDLSIDSILAGYRQIVQDNE HCCCCCCCCCCCHHHHHHHEEEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCC ADVVSSSFGLCEQVFTAAYNGNDATSILGLFDSVFKQGNAQGISFVASSGDNAGLECPDT CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC QYLVEGKSGRYIPSVEWPAADAHVTAVGGGNLLTAYKKGSLDSTYLSESAFADPLQAEDP CEEEECCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCC YGVGALLSGGYWGAGGGVSTLFQRPAYQLRALGGTRTSMRALPDVGMLVGGCPGIAVHPC CCCHHHCCCCCCCCCCCHHHHHHCCCHHHHHCCCCCHHHHHCCCHHHHHCCCCCCEECCC QQGTSSVSIYVAGAITKVIGTSVAAPEFASVAALLVQKQGRQGNLNDYLYRLAANGPEAY CCCCCEEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHH HRGIPGNNGVVSNDVPIAGKYNYTTGLGTPIVRLMIGALDAAPAGIPRSPSNP HCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MIAPLVASGRARPCDAIRPRSLLCPPERSMLTRIRCRPLLAAVLSASLFAFGSANAATTV CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PDARIDAMTASLRAAPVSFDVHLPSRDQVALDALLADIQDPLSPQYHKWLSAADFQRRFG CCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC PAPAQLAQVRAALQAAHMTVVQQGPTLHVSANADSVERLFAAPLVADLKAGQQVRLTAAA CCHHHHHHHHHHHHHHHHHHEECCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEEC PLQLPAALRAKGVTVTGLTRGLPPAHMNSRLVASDPSNRYGDGTTSYWYNDLKQAYGYPS CCCCCHHHHHCCCEEEEHHCCCCCHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCC YQTMVGAPGQQRRLDGSGSTIAILIGSDVLDSDIATMFDHEHFSRYAGNHANPTLYARRY HHHEECCCCHHCEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH VAGAKPGVQDGNRAAAREATLDVDMALGGAPGAHVLLYVIPDLSIDSILAGYRQIVQDNE HCCCCCCCCCCCHHHHHHHEEEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCC ADVVSSSFGLCEQVFTAAYNGNDATSILGLFDSVFKQGNAQGISFVASSGDNAGLECPDT CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC QYLVEGKSGRYIPSVEWPAADAHVTAVGGGNLLTAYKKGSLDSTYLSESAFADPLQAEDP CEEEECCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCC YGVGALLSGGYWGAGGGVSTLFQRPAYQLRALGGTRTSMRALPDVGMLVGGCPGIAVHPC CCCHHHCCCCCCCCCCCHHHHHHCCCHHHHHCCCCCHHHHHCCCHHHHHCCCCCCEECCC QQGTSSVSIYVAGAITKVIGTSVAAPEFASVAALLVQKQGRQGNLNDYLYRLAANGPEAY CCCCCEEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHH HRGIPGNNGVVSNDVPIAGKYNYTTGLGTPIVRLMIGALDAAPAGIPRSPSNP HCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7929375; 8576087; 10488127; 11747435; 11323721 [H]