Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
---|---|
Accession | NC_003919 |
Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is glnE
Identifier: 21241321
GI number: 21241321
Start: 649023
End: 651848
Strand: Direct
Name: glnE
Synonym: XAC0550
Alternate gene names: 21241321
Gene position: 649023-651848 (Clockwise)
Preceding gene: 21241318
Following gene: 21241323
Centisome position: 12.54
GC content: 68.72
Gene sequence:
>2826_bases ATGCCGATGCCGACCGTTTCCATGTCTCCTGCGCTCACCGCCCTGATCGAGCGGGCCGTGGCGCGTGTCCGTCAATCGTT GCCTGTCGAGCAGGCGTGGCCGGGCGGCGAGTTCGATCGGCAGCTCGCGCAGGTGGCACTGGCCAGCGAGTTCGCGCTCG ATACGTTGGCGCGGCAACCGGCATTGCTGCAGCACCTGGCGCAACCCGATCCGCCGCCGCTACCACTGCCACAGTTCGAT CCGGCGCAGCCGCAGCTGTGGCCTGCGCAATTGCGACGCTATCGCAGCGCCGAGTCCACGCGCCTGGTGTGGCGCGATGT GCTCGGTCTGGACAGCGTCGAGGCCACCCTGGCCGGCGCAACCCAGCTGGCCGAGCACTGCCTGCAATGCGGCCTGCAAG CGCTGGAGCAGCAGTTCCACACCCGCCACGGCAAGGTCGTTGCTGCTGACGGCAGCGTGCAACGCCTGGTGGTGTTCGGG CTGGGCAAGCTGGGCGGCGGCGAGCTGAATTTTTCCTCGGACGTGGATCTGGTCTACGCCTATCCGCAGGGCGGCCAATC CGATGGCGCGCGTCCATTGGCGGCAGAAGAGTATTTCGCACGGTTGGGCCAGCAGCTGGCCAGGTTGCTGGACGAAACCA CGGCCGACGGCTTCAGCCATCGCGTGGATCTGCGCCTGCGTCCGTTCGGCACCGCCGGCCGCGTGGCGTTGTCGTTCGCC GGCATGGACCAGTATTTCCAGCGCGAAGGTCGCGATTGGGAGCGCTATGCCTGGCTCAAGGCGCGCGCGGTGGCTGGCGA TATCGACGCCGGCGAGGCCTGGCTGGAAACGCTGCGCCCCTTCGTCTACCGGCGGTATCTGGACTTCACCGCGCTGGATG GCTTGCGCGAAATGAAGGCAGCCATCACCGCCGAAGTGGCGCGGCATGATCGTCTGGACGACATCAAGCGTGGGCCCGGC GGAATTCGCGAAATCGAGTTTCTGGCGCAATCGCTGCAGCTGATTCGCGGCGGACGCGAGCCGAGCCTGCGCGAACGCCG CCTGCTGCCCGCGCTGCAGGCGCTGGTGGCCGCAGGCCAGATCGACCAGGAAAACGGCCAGGCGCTGTCGACGGCGTATC GTTTTCTACGCCGGCTGGAAAATCGCCTGCAGATGTTGCGCGATGCGCAGACCCACGCATTGCCGCAGGCGCCGCTGGAT CGCGAGCGCATTGCGCTAGGCCTGGGTTACGCGCAGTGGTCGGCCCTGCTGGACGCGCTGGCGCCGCAGCGCGCGCGGGT TGCGGCAGAATTTGCCGAGCTGCTGGCCCCGCGCGTGCGCGCCACTGCGCCGGACGCGCTTGCCGATTACTGGCGCGCGC TGCCGGACGGCGATGCTGCGCCGTTGGCGGGGATTGGCTTGAACGATCCCGATGGCGCGCATCGGGCGCTGGCCGATTTC GCGCAGTCCTCCGGCGTGCGCGCACTGTCCGATAGTGCGCGTGCGCGGCTGGATCGGGTGATGCCGGCACTGCTGCACGC GGCCACCCGCGCCAGCCAGCCCGACGCGGCCGTGCGTCGCATGCTCGGCCTGCTGCAGGCCACCTTGCGCCGCACCAGCT ATCTGGCCTTGCTCGATGAGCAACCCAGCGCGCTTGCACGCCTGGTCGATGTGCTCTCGCGCAGTGCGCTGCTGGCCGAG CGGCTGGCGGCGTATCCGTTGCTGCTGGACGAATTGCTCGACACCCGCATCAGCGGCCCGCTGCCGGATCGCGCAGCGCT GCACGCGGCCTGCGCCCATACCTTGCACATCGATGACACCGAAGCGGCGTTGCGCGAGCTCAACGAGCGTCGGCTTGCAC TGAGCTTCCGCATTGCGCTGGCCACGCTGGATGGCCGCCAGCAGGCGGTGGAGAGCACCCGGCAACTGGCCTGGCTTGCC GAAGCGGTCGTGCAGACCGTGCTGCACCTGGCGCGCAGCGACATGCTCGCCGCGCACGGACACGTGCCCGGCGGAAGCTT TGCCATCGTCGGTTACGGCAGTCTGGGCGGGCTGGAGCTGGGATTCGGATCGGATCTGGATCTGGTGTTTCTGTACGATC ATCCGCGCGAGGTGGACGCCTCCGATGGCAAGCGCCCACTGGACGCCGGGCGCTGGTTTGCACGGCTTGCGCAGAAGGTG ATGGCATTGCTGGCTGCCGAGACCGGCGCCGGCCGGCTGTACGACATCGATGTGCGACTGCGCCCGGATGGCGGCAAGGG CGCACTGGTGTCCTCGCTGGCCAGTTACCGCGAATACCAGCGCGATCGCGCCTGGACCTGGGAGCATCAGGCCCTGGTGC GTGCACGCGCGGTGGCCGGCGACGCAGCGCTTTGCGACGCGTTTGCCCAGGTGCGTCGCGATACGCTGATGCGGGTGCGC GACACCGCGCAGTTGCACGAGGACGTGCGCAAGATGCGTGCGCGCATGCGCGCCGAACTGGATCGCAGCGATGCCGGCCG GCTGGATCTCAAGCAAGGCGCTGGCGGCCTGGTGGATCTGGAATTCGTGCTGCAGGCCGGCGTGCTCGGGCTGGCAGCGC AGCAGCCGCAGCTGCTGGATGCCTGCGACACGCCCGCGTTGATCGACGCACTGGCGCGCACGCACTGGCTGCCGGACGAG AGCGCCGCACCACTGCATCAGGCGCACGCAACGCTGGTCGATGCCGGCCTGAGCTGCACACTGGACCGCCGCCCACGCCT GATCGCACCCACGCCGGCCATCCAGCAGGCGCGCGGCATCATCTTCAACGCAGCACGTGGGCAGGGCCTGACGTTTCCGC TGGGCAAGGATGAAACAGCGCTGTAA
Upstream 100 bases:
>100_bases TGTTCAAAGCGGCGAAATGCTGCACGCCCTGTTGCAGTCGCTATGCGGGATGTCGCGCACGCGTGCACTCCCTGCGCTGC AGTGATGCCAAAATCCGGTC
Downstream 100 bases:
>100_bases GTGCACTGGTGAGTACGCCGCTTTCGATGCAGCTGCAGCAAACGGCAGCAACGGTGCCTTGCTGTCCTGGCGGAGGCAAC GCACCCATGAGCGTCAGCGT
Product: glutamine synthetase adenylyltransferase
Products: NA
Alternate protein names: Glutamine-synthetase adenylyltransferase; ATase; [Glutamate--ammonia-ligase] adenylyltransferase
Number of amino acids: Translated: 941; Mature: 940
Protein sequence:
>941_residues MPMPTVSMSPALTALIERAVARVRQSLPVEQAWPGGEFDRQLAQVALASEFALDTLARQPALLQHLAQPDPPPLPLPQFD PAQPQLWPAQLRRYRSAESTRLVWRDVLGLDSVEATLAGATQLAEHCLQCGLQALEQQFHTRHGKVVAADGSVQRLVVFG LGKLGGGELNFSSDVDLVYAYPQGGQSDGARPLAAEEYFARLGQQLARLLDETTADGFSHRVDLRLRPFGTAGRVALSFA GMDQYFQREGRDWERYAWLKARAVAGDIDAGEAWLETLRPFVYRRYLDFTALDGLREMKAAITAEVARHDRLDDIKRGPG GIREIEFLAQSLQLIRGGREPSLRERRLLPALQALVAAGQIDQENGQALSTAYRFLRRLENRLQMLRDAQTHALPQAPLD RERIALGLGYAQWSALLDALAPQRARVAAEFAELLAPRVRATAPDALADYWRALPDGDAAPLAGIGLNDPDGAHRALADF AQSSGVRALSDSARARLDRVMPALLHAATRASQPDAAVRRMLGLLQATLRRTSYLALLDEQPSALARLVDVLSRSALLAE RLAAYPLLLDELLDTRISGPLPDRAALHAACAHTLHIDDTEAALRELNERRLALSFRIALATLDGRQQAVESTRQLAWLA EAVVQTVLHLARSDMLAAHGHVPGGSFAIVGYGSLGGLELGFGSDLDLVFLYDHPREVDASDGKRPLDAGRWFARLAQKV MALLAAETGAGRLYDIDVRLRPDGGKGALVSSLASYREYQRDRAWTWEHQALVRARAVAGDAALCDAFAQVRRDTLMRVR DTAQLHEDVRKMRARMRAELDRSDAGRLDLKQGAGGLVDLEFVLQAGVLGLAAQQPQLLDACDTPALIDALARTHWLPDE SAAPLHQAHATLVDAGLSCTLDRRPRLIAPTPAIQQARGIIFNAARGQGLTFPLGKDETAL
Sequences:
>Translated_941_residues MPMPTVSMSPALTALIERAVARVRQSLPVEQAWPGGEFDRQLAQVALASEFALDTLARQPALLQHLAQPDPPPLPLPQFD PAQPQLWPAQLRRYRSAESTRLVWRDVLGLDSVEATLAGATQLAEHCLQCGLQALEQQFHTRHGKVVAADGSVQRLVVFG LGKLGGGELNFSSDVDLVYAYPQGGQSDGARPLAAEEYFARLGQQLARLLDETTADGFSHRVDLRLRPFGTAGRVALSFA GMDQYFQREGRDWERYAWLKARAVAGDIDAGEAWLETLRPFVYRRYLDFTALDGLREMKAAITAEVARHDRLDDIKRGPG GIREIEFLAQSLQLIRGGREPSLRERRLLPALQALVAAGQIDQENGQALSTAYRFLRRLENRLQMLRDAQTHALPQAPLD RERIALGLGYAQWSALLDALAPQRARVAAEFAELLAPRVRATAPDALADYWRALPDGDAAPLAGIGLNDPDGAHRALADF AQSSGVRALSDSARARLDRVMPALLHAATRASQPDAAVRRMLGLLQATLRRTSYLALLDEQPSALARLVDVLSRSALLAE RLAAYPLLLDELLDTRISGPLPDRAALHAACAHTLHIDDTEAALRELNERRLALSFRIALATLDGRQQAVESTRQLAWLA EAVVQTVLHLARSDMLAAHGHVPGGSFAIVGYGSLGGLELGFGSDLDLVFLYDHPREVDASDGKRPLDAGRWFARLAQKV MALLAAETGAGRLYDIDVRLRPDGGKGALVSSLASYREYQRDRAWTWEHQALVRARAVAGDAALCDAFAQVRRDTLMRVR DTAQLHEDVRKMRARMRAELDRSDAGRLDLKQGAGGLVDLEFVLQAGVLGLAAQQPQLLDACDTPALIDALARTHWLPDE SAAPLHQAHATLVDAGLSCTLDRRPRLIAPTPAIQQARGIIFNAARGQGLTFPLGKDETAL >Mature_940_residues PMPTVSMSPALTALIERAVARVRQSLPVEQAWPGGEFDRQLAQVALASEFALDTLARQPALLQHLAQPDPPPLPLPQFDP AQPQLWPAQLRRYRSAESTRLVWRDVLGLDSVEATLAGATQLAEHCLQCGLQALEQQFHTRHGKVVAADGSVQRLVVFGL GKLGGGELNFSSDVDLVYAYPQGGQSDGARPLAAEEYFARLGQQLARLLDETTADGFSHRVDLRLRPFGTAGRVALSFAG MDQYFQREGRDWERYAWLKARAVAGDIDAGEAWLETLRPFVYRRYLDFTALDGLREMKAAITAEVARHDRLDDIKRGPGG IREIEFLAQSLQLIRGGREPSLRERRLLPALQALVAAGQIDQENGQALSTAYRFLRRLENRLQMLRDAQTHALPQAPLDR ERIALGLGYAQWSALLDALAPQRARVAAEFAELLAPRVRATAPDALADYWRALPDGDAAPLAGIGLNDPDGAHRALADFA QSSGVRALSDSARARLDRVMPALLHAATRASQPDAAVRRMLGLLQATLRRTSYLALLDEQPSALARLVDVLSRSALLAER LAAYPLLLDELLDTRISGPLPDRAALHAACAHTLHIDDTEAALRELNERRLALSFRIALATLDGRQQAVESTRQLAWLAE AVVQTVLHLARSDMLAAHGHVPGGSFAIVGYGSLGGLELGFGSDLDLVFLYDHPREVDASDGKRPLDAGRWFARLAQKVM ALLAAETGAGRLYDIDVRLRPDGGKGALVSSLASYREYQRDRAWTWEHQALVRARAVAGDAALCDAFAQVRRDTLMRVRD TAQLHEDVRKMRARMRAELDRSDAGRLDLKQGAGGLVDLEFVLQAGVLGLAAQQPQLLDACDTPALIDALARTHWLPDES AAPLHQAHATLVDAGLSCTLDRRPRLIAPTPAIQQARGIIFNAARGQGLTFPLGKDETAL
Specific function: Adenylation and deadenylation of glutamate--ammonia ligase
COG id: COG1391
COG function: function code OT; Glutamine synthetase adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glnE family
Homologues:
Organism=Escherichia coli, GI1789433, Length=825, Percent_Identity=40.4848484848485, Blast_Score=557, Evalue=1e-159,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLNE_XANAC (Q8PPY3)
Other databases:
- EMBL: AE008923 - RefSeq: NP_640903.1 - ProteinModelPortal: Q8PPY3 - GeneID: 1154621 - GenomeReviews: AE008923_GR - KEGG: xac:XAC0550 - NMPDR: fig|190486.1.peg.547 - HOGENOM: HBG687047 - OMA: VLGMGKL - ProtClustDB: CLSK2516694 - BioCyc: XAXO190486:XAC0550-MONOMER - BRENDA: 2.7.7.42 - HAMAP: MF_00802 - InterPro: IPR023057 - InterPro: IPR005190 - InterPro: IPR013546
Pfam domain/function: PF08335 GlnD_UR_UTase; PF03710 GlnE
EC number: =2.7.7.42
Molecular weight: Translated: 102807; Mature: 102676
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMPTVSMSPALTALIERAVARVRQSLPVEQAWPGGEFDRQLAQVALASEFALDTLARQP CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCH ALLQHLAQPDPPPLPLPQFDPAQPQLWPAQLRRYRSAESTRLVWRDVLGLDSVEATLAGA HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHH TQLAEHCLQCGLQALEQQFHTRHGKVVAADGSVQRLVVFGLGKLGGGELNFSSDVDLVYA HHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHEEHEEECCCCCCCCCCCCCCCCEEEE YPQGGQSDGARPLAAEEYFARLGQQLARLLDETTADGFSHRVDLRLRPFGTAGRVALSFA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHH GMDQYFQREGRDWERYAWLKARAVAGDIDAGEAWLETLRPFVYRRYLDFTALDGLREMKA HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AITAEVARHDRLDDIKRGPGGIREIEFLAQSLQLIRGGREPSLRERRLLPALQALVAAGQ HHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC IDQENGQALSTAYRFLRRLENRLQMLRDAQTHALPQAPLDRERIALGLGYAQWSALLDAL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHH APQRARVAAEFAELLAPRVRATAPDALADYWRALPDGDAAPLAGIGLNDPDGAHRALADF CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH AQSSGVRALSDSARARLDRVMPALLHAATRASQPDAAVRRMLGLLQATLRRTSYLALLDE HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEECC QPSALARLVDVLSRSALLAERLAAYPLLLDELLDTRISGPLPDRAALHAACAHTLHIDDT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHH EAALRELNERRLALSFRIALATLDGRQQAVESTRQLAWLAEAVVQTVLHLARSDMLAAHG HHHHHHHHHHHHHHHEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HVPGGSFAIVGYGSLGGLELGFGSDLDLVFLYDHPREVDASDGKRPLDAGRWFARLAQKV CCCCCCEEEEEECCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH MALLAAETGAGRLYDIDVRLRPDGGKGALVSSLASYREYQRDRAWTWEHQALVRARAVAG HHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC DAALCDAFAQVRRDTLMRVRDTAQLHEDVRKMRARMRAELDRSDAGRLDLKQGAGGLVDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH EFVLQAGVLGLAAQQPQLLDACDTPALIDALARTHWLPDESAAPLHQAHATLVDAGLSCT HHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEE LDRRPRLIAPTPAIQQARGIIFNAARGQGLTFPLGKDETAL ECCCCCEECCCHHHHHHCCEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure PMPTVSMSPALTALIERAVARVRQSLPVEQAWPGGEFDRQLAQVALASEFALDTLARQP CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCH ALLQHLAQPDPPPLPLPQFDPAQPQLWPAQLRRYRSAESTRLVWRDVLGLDSVEATLAGA HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHH TQLAEHCLQCGLQALEQQFHTRHGKVVAADGSVQRLVVFGLGKLGGGELNFSSDVDLVYA HHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHEEHEEECCCCCCCCCCCCCCCCEEEE YPQGGQSDGARPLAAEEYFARLGQQLARLLDETTADGFSHRVDLRLRPFGTAGRVALSFA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHH GMDQYFQREGRDWERYAWLKARAVAGDIDAGEAWLETLRPFVYRRYLDFTALDGLREMKA HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AITAEVARHDRLDDIKRGPGGIREIEFLAQSLQLIRGGREPSLRERRLLPALQALVAAGQ HHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC IDQENGQALSTAYRFLRRLENRLQMLRDAQTHALPQAPLDRERIALGLGYAQWSALLDAL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHH APQRARVAAEFAELLAPRVRATAPDALADYWRALPDGDAAPLAGIGLNDPDGAHRALADF CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH AQSSGVRALSDSARARLDRVMPALLHAATRASQPDAAVRRMLGLLQATLRRTSYLALLDE HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEECC QPSALARLVDVLSRSALLAERLAAYPLLLDELLDTRISGPLPDRAALHAACAHTLHIDDT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHH EAALRELNERRLALSFRIALATLDGRQQAVESTRQLAWLAEAVVQTVLHLARSDMLAAHG HHHHHHHHHHHHHHHEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HVPGGSFAIVGYGSLGGLELGFGSDLDLVFLYDHPREVDASDGKRPLDAGRWFARLAQKV CCCCCCEEEEEECCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH MALLAAETGAGRLYDIDVRLRPDGGKGALVSSLASYREYQRDRAWTWEHQALVRARAVAG HHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC DAALCDAFAQVRRDTLMRVRDTAQLHEDVRKMRARMRAELDRSDAGRLDLKQGAGGLVDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH EFVLQAGVLGLAAQQPQLLDACDTPALIDALARTHWLPDESAAPLHQAHATLVDAGLSCT HHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEE LDRRPRLIAPTPAIQQARGIIFNAARGQGLTFPLGKDETAL ECCCCCEECCCHHHHHHCCEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12024217