Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is ilvA [H]
Identifier: 21241153
GI number: 21241153
Start: 450882
End: 451841
Strand: Direct
Name: ilvA [H]
Synonym: XAC0379
Alternate gene names: 21241153
Gene position: 450882-451841 (Clockwise)
Preceding gene: 21241149
Following gene: 21241154
Centisome position: 8.71
GC content: 70.52
Gene sequence:
>960_bases ATGATCGAGACGGTCCCCCTTGCCCATTCCGACGTCCTGCAAGCCGCTGCGCGGATCGCGCCGCACTGCGCGCCGACACC GTTGCTGACATCGCACAGCCTAGATGCGCTCAGCAGTGCGCAGTTGTTCTTCAAGGCCGAGCATCTGCAGCGCAGTGGCG CATTCAAGTTCCGGGGTGCCTGCAATGCCGTATGGTCGCTGCCGGACGCGCTGGCTGCGCGCGGTGTGGTCACGCATTCC TCCGGCAATCACGGCGCGGCGCTGGCGCTTGCCGCACGCACGCGCGGCATCGGCTGCCACGTGGTGGTGCCCGAGGGCGC GGTGGCGGCCAAGCTCGCCAATATCTCCCGGAACGGCGCCACGTTGTGGCGTTGCGCGCCGACCATCGCGGCGCGGGAAC AGATGTGCGCTGAGGTGCAGGCCGGCAGCGGCGCCACGCTGGTGCACCCGTATACCGATCGTGCAGTGATCGCCGGGCAG GGCACCGCCACGCTGGAGTTGCTGCACCAGAGCGGCGTGCTGGATGTGCTGGTGGCGCCTGTCGGCGGTGGTGGGCTGGC GGCCGGTGCCGCACTGGCGCTGCAGGCTTCGCCGGACTGCGAGCTGGTGCTGGCCGAGCCTGCCGGCGCAGCCGACACCG CGCGTTCGCTGGCGGCCGGGCAGCGGCTGGTCGATTTCGTGCCGGACACCATTTGCGACGGCCTGCGCGGCACCTTGGGC GCGCCCAACTTCGCCGTGCTGCAGCGCGCCGGTGCGCAGGTGATCACGGTGGACGATGCCGCGGTGGTGCAGGCCATGCG GCTGGTCTGGCAGTTGCTCAAGCAAGTGGTCGAGCCGTCTTCGGCGATCGCCCTGGCTGCGGTCCTGGCCCAGCCGGCAC GGTTTGCCGGGCGGCGAGTGGGGCTGATCCTGTCCGGCGGCAATGTCGATCTGGACGCCTTGCCTTGGGTCGCGGCGTGA
Upstream 100 bases:
>100_bases CCTTAATTGTGCGGCATTGCGACGCTTTGTCATCGATCCAGCATGCGCGGCGGTAGGCGTGCGACCCGTGAAGAGGAGGC GATACGTTAATCTTGCAGGC
Downstream 100 bases:
>100_bases GCAGGCGCTCACGCGGGCTCGGCCTGTGGGGCTGGGGCTGGCGGTTGTGCATGCTGGCGCTGATCTGGCTGGTGGCCGTG GCAGGCTGGATCGTGTGGAT
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MIETVPLAHSDVLQAAARIAPHCAPTPLLTSHSLDALSSAQLFFKAEHLQRSGAFKFRGACNAVWSLPDALAARGVVTHS SGNHGAALALAARTRGIGCHVVVPEGAVAAKLANISRNGATLWRCAPTIAAREQMCAEVQAGSGATLVHPYTDRAVIAGQ GTATLELLHQSGVLDVLVAPVGGGGLAAGAALALQASPDCELVLAEPAGAADTARSLAAGQRLVDFVPDTICDGLRGTLG APNFAVLQRAGAQVITVDDAAVVQAMRLVWQLLKQVVEPSSAIALAAVLAQPARFAGRRVGLILSGGNVDLDALPWVAA
Sequences:
>Translated_319_residues MIETVPLAHSDVLQAAARIAPHCAPTPLLTSHSLDALSSAQLFFKAEHLQRSGAFKFRGACNAVWSLPDALAARGVVTHS SGNHGAALALAARTRGIGCHVVVPEGAVAAKLANISRNGATLWRCAPTIAAREQMCAEVQAGSGATLVHPYTDRAVIAGQ GTATLELLHQSGVLDVLVAPVGGGGLAAGAALALQASPDCELVLAEPAGAADTARSLAAGQRLVDFVPDTICDGLRGTLG APNFAVLQRAGAQVITVDDAAVVQAMRLVWQLLKQVVEPSSAIALAAVLAQPARFAGRRVGLILSGGNVDLDALPWVAA >Mature_319_residues MIETVPLAHSDVLQAAARIAPHCAPTPLLTSHSLDALSSAQLFFKAEHLQRSGAFKFRGACNAVWSLPDALAARGVVTHS SGNHGAALALAARTRGIGCHVVVPEGAVAAKLANISRNGATLWRCAPTIAAREQMCAEVQAGSGATLVHPYTDRAVIAGQ GTATLELLHQSGVLDVLVAPVGGGGLAAGAALALQASPDCELVLAEPAGAADTARSLAAGQRLVDFVPDTICDGLRGTLG APNFAVLQRAGAQVITVDDAAVVQAMRLVWQLLKQVVEPSSAIALAAVLAQPARFAGRRVGLILSGGNVDLDALPWVAA
Specific function: Acts on both serine and threonine, and properly considered as a hydroxy amino acid deaminase [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=320, Percent_Identity=39.6875, Blast_Score=222, Evalue=4e-58, Organism=Escherichia coli, GI1789505, Length=318, Percent_Identity=29.559748427673, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI1790207, Length=299, Percent_Identity=32.4414715719064, Blast_Score=99, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17508781, Length=321, Percent_Identity=35.5140186915888, Blast_Score=179, Evalue=1e-45, Organism=Caenorhabditis elegans, GI71991565, Length=311, Percent_Identity=31.5112540192926, Blast_Score=111, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17537387, Length=315, Percent_Identity=31.4285714285714, Blast_Score=92, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6322631, Length=305, Percent_Identity=40.9836065573771, Blast_Score=203, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6320930, Length=291, Percent_Identity=29.8969072164948, Blast_Score=100, Evalue=5e-22, Organism=Saccharomyces cerevisiae, GI6319788, Length=283, Percent_Identity=27.208480565371, Blast_Score=64, Evalue=4e-11, Organism=Drosophila melanogaster, GI21355833, Length=312, Percent_Identity=29.4871794871795, Blast_Score=77, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005789 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 32454; Mature: 32454
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIETVPLAHSDVLQAAARIAPHCAPTPLLTSHSLDALSSAQLFFKAEHLQRSGAFKFRGA CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCC CNAVWSLPDALAARGVVTHSSGNHGAALALAARTRGIGCHVVVPEGAVAAKLANISRNGA CHHHHCCHHHHHHCCEEEECCCCCCEEEEEEECCCCCEEEEECCCCHHHHHHHHCCCCCC TLWRCAPTIAAREQMCAEVQAGSGATLVHPYTDRAVIAGQGTATLELLHQSGVLDVLVAP EEEEECHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCHHHHHHHHCCCEEEEEEC VGGGGLAAGAALALQASPDCELVLAEPAGAADTARSLAAGQRLVDFVPDTICDGLRGTLG CCCCCHHHCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC APNFAVLQRAGAQVITVDDAAVVQAMRLVWQLLKQVVEPSSAIALAAVLAQPARFAGRRV CCCHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEE GLILSGGNVDLDALPWVAA EEEEECCCCCCCCCCCCCC >Mature Secondary Structure MIETVPLAHSDVLQAAARIAPHCAPTPLLTSHSLDALSSAQLFFKAEHLQRSGAFKFRGA CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCC CNAVWSLPDALAARGVVTHSSGNHGAALALAARTRGIGCHVVVPEGAVAAKLANISRNGA CHHHHCCHHHHHHCCEEEECCCCCCEEEEEEECCCCCEEEEECCCCHHHHHHHHCCCCCC TLWRCAPTIAAREQMCAEVQAGSGATLVHPYTDRAVIAGQGTATLELLHQSGVLDVLVAP EEEEECHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCHHHHHHHHCCCEEEEEEC VGGGGLAAGAALALQASPDCELVLAEPAGAADTARSLAAGQRLVDFVPDTICDGLRGTLG CCCCCHHHCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC APNFAVLQRAGAQVITVDDAAVVQAMRLVWQLLKQVVEPSSAIALAAVLAQPARFAGRRV CCCHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEE GLILSGGNVDLDALPWVAA EEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA