Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is lip2 [H]
Identifier: 21241149
GI number: 21241149
Start: 445592
End: 446560
Strand: Direct
Name: lip2 [H]
Synonym: XAC0375
Alternate gene names: 21241149
Gene position: 445592-446560 (Clockwise)
Preceding gene: 21241148
Following gene: 21241153
Centisome position: 8.61
GC content: 68.21
Gene sequence:
>969_bases ATGTCGTTTGATCCTGATGTCGTGCGCCTGTTCGCCCAGCTTCAAGAGGCGGCGCAGCCGCCCATGGACACCCTGCCGAT CGAAGGCGCGCGCGCGATGATGCGCGCGGTGGGCGCGCAGTTCGGTTTCCAGCGCCTCGAGATGGCCGAGGTACGCGATC TGCAGGCCGATGCCGCTACCGGTGCAGTGCCTTTGCGCGTGTATCGCCCTACGGGGCTCGCAACCGGCCCAGCCCCGACC TGCCTATACGTGCACGGCGGCGGCGGTCTGGTCGGCGATCTGGAGTCCCATGACGATGTGTGTCGGCAATTGGCAGCGCG CGCTGGCTGTCAGGTGCTGGCGATCCATTACCGTCTGGCCCCCGAGCACCCGGCGCCGGCCGGTGTGGAAGATGTCATCG CGACCTTGCATTGGCTGGTTGCGCACCCGGACACGGTCGGCGCCGATGTGCAGCGCCTTGCCGTCTGCGGCGACAGTATC GGCGGCGCCATGGCCGCGGTTGCCGCACTGGCCGCGCGCGATGCCGGAATCGCCTTGCGTTGCCAGCTGCTGGTCTATCC GCTGACCGACGCGCGCCAGGACAGCGGCTTGTATCCATCGCGCTCGCTCAACGCCGGCCTGCCGCCGTTGACTGCGGCAG CGGTGGAATTCTTCAACCGCCATCTGCTGCCGGATATGGCGGTGGCCAACGACTGGCGTGTCTCGCCGATGCTGGCGCCG GATGTCGCCGGCGTTGCGCCTGCGCTGGTCGTGGTCTGCGACCGCGACATGCTCTACGACGAAGGCCGCGCCTATGCCGA GCGCCTGCGTGCGGCAGGAGTGGAAGTCACCCTGCATAGCTTCCCGGGCATGATCCACGGCTTCATCAACATGGGCAGCG TCTTGCGTGCCGCCGGTGAAACGCTGGACCTGGCGGCACTGACGCTACGCCAGCGCCTGCTGCCGGCGATCGAACGCAGG GCCGCCTGA
Upstream 100 bases:
>100_bases CCGGCCAGCAGGTCAATCCGTTAACACTAGTTAACGATGTGAATAGTGACGATTCATAACAATCTGGCAAGCTCGACAAC TGCTTATCGGAGAGTTCGTC
Downstream 100 bases:
>100_bases CGACCTGCGGCAGCCGTGCCGAGGCTCGCGCTGCCGCAACCCTGGCGGTATCGCTGCAGCTTCGGTGCGTGTGGCACCGC ATGCCTGTGCGCCCTGCGAC
Product: lipase
Products: NA
Alternate protein names: Triacylglycerol lipase [H]
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MSFDPDVVRLFAQLQEAAQPPMDTLPIEGARAMMRAVGAQFGFQRLEMAEVRDLQADAATGAVPLRVYRPTGLATGPAPT CLYVHGGGGLVGDLESHDDVCRQLAARAGCQVLAIHYRLAPEHPAPAGVEDVIATLHWLVAHPDTVGADVQRLAVCGDSI GGAMAAVAALAARDAGIALRCQLLVYPLTDARQDSGLYPSRSLNAGLPPLTAAAVEFFNRHLLPDMAVANDWRVSPMLAP DVAGVAPALVVVCDRDMLYDEGRAYAERLRAAGVEVTLHSFPGMIHGFINMGSVLRAAGETLDLAALTLRQRLLPAIERR AA
Sequences:
>Translated_322_residues MSFDPDVVRLFAQLQEAAQPPMDTLPIEGARAMMRAVGAQFGFQRLEMAEVRDLQADAATGAVPLRVYRPTGLATGPAPT CLYVHGGGGLVGDLESHDDVCRQLAARAGCQVLAIHYRLAPEHPAPAGVEDVIATLHWLVAHPDTVGADVQRLAVCGDSI GGAMAAVAALAARDAGIALRCQLLVYPLTDARQDSGLYPSRSLNAGLPPLTAAAVEFFNRHLLPDMAVANDWRVSPMLAP DVAGVAPALVVVCDRDMLYDEGRAYAERLRAAGVEVTLHSFPGMIHGFINMGSVLRAAGETLDLAALTLRQRLLPAIERR AA >Mature_321_residues SFDPDVVRLFAQLQEAAQPPMDTLPIEGARAMMRAVGAQFGFQRLEMAEVRDLQADAATGAVPLRVYRPTGLATGPAPTC LYVHGGGGLVGDLESHDDVCRQLAARAGCQVLAIHYRLAPEHPAPAGVEDVIATLHWLVAHPDTVGADVQRLAVCGDSIG GAMAAVAALAARDAGIALRCQLLVYPLTDARQDSGLYPSRSLNAGLPPLTAAAVEFFNRHLLPDMAVANDWRVSPMLAPD VAGVAPALVVVCDRDMLYDEGRAYAERLRAAGVEVTLHSFPGMIHGFINMGSVLRAAGETLDLAALTLRQRLLPAIERRA A
Specific function: Has An Esterase Activity. Triacetyl Glycerol (Triacetin) Is A Substrate Of The Enzyme. [C]
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Homo sapiens, GI157041239, Length=324, Percent_Identity=28.0864197530864, Blast_Score=104, Evalue=9e-23, Organism=Homo sapiens, GI68299767, Length=293, Percent_Identity=27.3037542662116, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI61966717, Length=181, Percent_Identity=32.0441988950276, Blast_Score=89, Evalue=7e-18, Organism=Homo sapiens, GI157041237, Length=286, Percent_Identity=27.6223776223776, Blast_Score=77, Evalue=2e-14, Organism=Escherichia coli, GI1786682, Length=263, Percent_Identity=28.1368821292776, Blast_Score=90, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17540028, Length=327, Percent_Identity=25.3822629969419, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17567059, Length=270, Percent_Identity=29.6296296296296, Blast_Score=100, Evalue=9e-22, Organism=Caenorhabditis elegans, GI72001146, Length=317, Percent_Identity=23.9747634069401, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71996133, Length=139, Percent_Identity=33.8129496402878, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI115533410, Length=97, Percent_Identity=32.9896907216495, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI115533412, Length=97, Percent_Identity=32.9896907216495, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24656084, Length=128, Percent_Identity=30.46875, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI24656076, Length=128, Percent_Identity=30.46875, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI20130169, Length=128, Percent_Identity=30.46875, Blast_Score=66, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: =3.1.1.3 [H]
Molecular weight: Translated: 34120; Mature: 33989
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFDPDVVRLFAQLQEAAQPPMDTLPIEGARAMMRAVGAQFGFQRLEMAEVRDLQADAAT CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GAVPLRVYRPTGLATGPAPTCLYVHGGGGLVGDLESHDDVCRQLAARAGCQVLAIHYRLA CCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEC PEHPAPAGVEDVIATLHWLVAHPDTVGADVQRLAVCGDSIGGAMAAVAALAARDAGIALR CCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEE CQLLVYPLTDARQDSGLYPSRSLNAGLPPLTAAAVEFFNRHLLPDMAVANDWRVSPMLAP EEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCC DVAGVAPALVVVCDRDMLYDEGRAYAERLRAAGVEVTLHSFPGMIHGFINMGSVLRAAGE CHHHHHHHEEEEECCHHHHHHHHHHHHHHHHCCCEEEHHHCCHHHHHHHHHHHHHHHCCC TLDLAALTLRQRLLPAIERRAA HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SFDPDVVRLFAQLQEAAQPPMDTLPIEGARAMMRAVGAQFGFQRLEMAEVRDLQADAAT CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GAVPLRVYRPTGLATGPAPTCLYVHGGGGLVGDLESHDDVCRQLAARAGCQVLAIHYRLA CCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEC PEHPAPAGVEDVIATLHWLVAHPDTVGADVQRLAVCGDSIGGAMAAVAALAARDAGIALR CCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEE CQLLVYPLTDARQDSGLYPSRSLNAGLPPLTAAAVEFFNRHLLPDMAVANDWRVSPMLAP EEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCC DVAGVAPALVVVCDRDMLYDEGRAYAERLRAAGVEVTLHSFPGMIHGFINMGSVLRAAGE CHHHHHHHEEEEECCHHHHHHHHHHHHHHHHCCCEEEHHHCCHHHHHHHHHHHHHHHCCC TLDLAALTLRQRLLPAIERRAA HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1907455 [H]