Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is ygjQ [C]
Identifier: 21241154
GI number: 21241154
Start: 451838
End: 452443
Strand: Direct
Name: ygjQ [C]
Synonym: XAC0380
Alternate gene names: 21241154
Gene position: 451838-452443 (Clockwise)
Preceding gene: 21241153
Following gene: 21241155
Centisome position: 8.73
GC content: 67.66
Gene sequence:
>606_bases GTGAGCAGGCGCTCACGCGGGCTCGGCCTGTGGGGCTGGGGCTGGCGGTTGTGCATGCTGGCGCTGATCTGGCTGGTGGC CGTGGCAGGCTGGATCGTGTGGATCGGCGACCGCGATCAGGCCGCGCCGGCCGATGTGATCATCGTGCTGGGTGCGGCCG CCTACGATGCGCGCCCTTCGCCGGTGTTCGAAGAACGCATCCGGCACGCGCTGGATCTATACGCGCAGGGCTATGCGCCG CGGCTGTTGTTCACCGGCGGCTTCGGCAACGGTGCGCGCTTTGCCGAATCGCAGGTAGCACGACGCTACGCGCTGCGCCA CGGCATCCCGCCGGACGCCATCGTGATCGAAACCACCTCGCGCACCACCCGGCAGAACCTGGAACAGGCGCGCACGCTGA TGGAGCGGCACGGCCTGCATCGGGCGATCATCGTCAGCGACCCGCTGCACATGGCGCGTGCGCTGCGACTGAGCCAGGAA CTGGGTATCGACGCGCTGGCCTCGTCCACGCCGAGCACGCGTTTTCGCAGCTTCCACACCAGCTGGCGCTTCCTGTTGCA GGAGGTGTATTACTTCCACCGCGATCTGGTGGTGCAAGGGTCGTGA
Upstream 100 bases:
>100_bases CTGCGGTCCTGGCCCAGCCGGCACGGTTTGCCGGGCGGCGAGTGGGGCTGATCCTGTCCGGCGGCAATGTCGATCTGGAC GCCTTGCCTTGGGTCGCGGC
Downstream 100 bases:
>100_bases CCGCAGGCCTATGATGCGGCTTTCCCAGCGGCAGGTTCGAGCATGAGCGAGACCCATCGGCAACACGCCATCGGCCTGGT CCAGGCCTACTACGCAGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MSRRSRGLGLWGWGWRLCMLALIWLVAVAGWIVWIGDRDQAAPADVIIVLGAAAYDARPSPVFEERIRHALDLYAQGYAP RLLFTGGFGNGARFAESQVARRYALRHGIPPDAIVIETTSRTTRQNLEQARTLMERHGLHRAIIVSDPLHMARALRLSQE LGIDALASSTPSTRFRSFHTSWRFLLQEVYYFHRDLVVQGS
Sequences:
>Translated_201_residues MSRRSRGLGLWGWGWRLCMLALIWLVAVAGWIVWIGDRDQAAPADVIIVLGAAAYDARPSPVFEERIRHALDLYAQGYAP RLLFTGGFGNGARFAESQVARRYALRHGIPPDAIVIETTSRTTRQNLEQARTLMERHGLHRAIIVSDPLHMARALRLSQE LGIDALASSTPSTRFRSFHTSWRFLLQEVYYFHRDLVVQGS >Mature_200_residues SRRSRGLGLWGWGWRLCMLALIWLVAVAGWIVWIGDRDQAAPADVIIVLGAAAYDARPSPVFEERIRHALDLYAQGYAPR LLFTGGFGNGARFAESQVARRYALRHGIPPDAIVIETTSRTTRQNLEQARTLMERHGLHRAIIVSDPLHMARALRLSQEL GIDALASSTPSTRFRSFHTSWRFLLQEVYYFHRDLVVQGS
Specific function: Unknown
COG id: COG1434
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22724; Mature: 22593
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRSRGLGLWGWGWRLCMLALIWLVAVAGWIVWIGDRDQAAPADVIIVLGAAAYDARPS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEECHHCCCCCC PVFEERIRHALDLYAQGYAPRLLFTGGFGNGARFAESQVARRYALRHGIPPDAIVIETTS HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCC RTTRQNLEQARTLMERHGLHRAIIVSDPLHMARALRLSQELGIDALASSTPSTRFRSFHT HHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHH SWRFLLQEVYYFHRDLVVQGS HHHHHHHHHHHHHHHHEEECC >Mature Secondary Structure SRRSRGLGLWGWGWRLCMLALIWLVAVAGWIVWIGDRDQAAPADVIIVLGAAAYDARPS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEECHHCCCCCC PVFEERIRHALDLYAQGYAPRLLFTGGFGNGARFAESQVARRYALRHGIPPDAIVIETTS HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCC RTTRQNLEQARTLMERHGLHRAIIVSDPLHMARALRLSQELGIDALASSTPSTRFRSFHT HHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHH SWRFLLQEVYYFHRDLVVQGS HHHHHHHHHHHHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA