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The map label for this gene is rprY [H]

Identifier: 57238095

GI number: 57238095

Start: 1273116

End: 1273781

Strand: Reverse

Name: rprY [H]

Synonym: CJE1358

Alternate gene names: 57238095

Gene position: 1273781-1273116 (Counterclockwise)

Preceding gene: 57238098

Following gene: 57238094

Centisome position: 71.65

GC content: 30.18

Gene sequence:

>666_bases
ATGGCTGCTAAAATTTTACTTTTAGAAGATGATTTGAGCTTGAGTGAGATCATTGAAGAGTTTTTAAACGATGAGGGATA
TGAAGTATTTTTATGCGATAATGCGCAAGAAGCTTTAGATATGGCTTATGAAAGATATTTTGATCTTTGGATTTTAGATG
TAAAAGTTCCTTTAGGAGATGGATTTTCATTACTTAAAGAATTAAGAAAAAGCGGAAAGCAAACTCCAGCAATTTTCATG
ACTTCTTTAAACACAACAAACGATTTAAAACAAGGCTTTGACGCAGGTTGTGATGATTATATAAAAAAACCTTTTGAACT
TGCCGAGTTATCTATCAGAGTTAAAGCTTTGCTTAAAAGAGCTTTTTCACATAAAAATGAAGATTTTGAAGATTTAGGAG
ATGGATTTAGATTTGAATTTACTACACAAATTCTTTACCATAATAATAAAGCCTTGACTTTACCGAGTAAAGAAATTAAG
CTTTTGTCTTTATTGCTTAAAAATAAAAACAACTTTTTAAGTACAGAGAGAATTTTTGAAGAACTCTGGGATTATGATGA
GGAGCCTAGTGAGCTAAGTTTAAGGGCTTATGTGAAAAATTTACGTAAAATTTTAGGAAAAGAAAAAATTATAAATCAAA
GAGGCAGGGGATATTGCTATGGCTAA

Upstream 100 bases:

>100_bases
AAAATAAATTAAATAAAAATGAAATTTTATTAAATAATTGATAAGAATTTTGATACAATGATATATATTTAAGAGATTTG
AAGTTAGAAAGATTTAAATT

Downstream 100 bases:

>100_bases
AAAAGTCATTAGGCAAATTTTATTAATCTACCTAACAACTACAGGTATTTTTTTAACTATTTTTTTTGCATTATGGTATC
AAAAATTATATGAAGAATTA

Product: DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MAAKILLLEDDLSLSEIIEEFLNDEGYEVFLCDNAQEALDMAYERYFDLWILDVKVPLGDGFSLLKELRKSGKQTPAIFM
TSLNTTNDLKQGFDAGCDDYIKKPFELAELSIRVKALLKRAFSHKNEDFEDLGDGFRFEFTTQILYHNNKALTLPSKEIK
LLSLLLKNKNNFLSTERIFEELWDYDEEPSELSLRAYVKNLRKILGKEKIINQRGRGYCYG

Sequences:

>Translated_221_residues
MAAKILLLEDDLSLSEIIEEFLNDEGYEVFLCDNAQEALDMAYERYFDLWILDVKVPLGDGFSLLKELRKSGKQTPAIFM
TSLNTTNDLKQGFDAGCDDYIKKPFELAELSIRVKALLKRAFSHKNEDFEDLGDGFRFEFTTQILYHNNKALTLPSKEIK
LLSLLLKNKNNFLSTERIFEELWDYDEEPSELSLRAYVKNLRKILGKEKIINQRGRGYCYG
>Mature_220_residues
AAKILLLEDDLSLSEIIEEFLNDEGYEVFLCDNAQEALDMAYERYFDLWILDVKVPLGDGFSLLKELRKSGKQTPAIFMT
SLNTTNDLKQGFDAGCDDYIKKPFELAELSIRVKALLKRAFSHKNEDFEDLGDGFRFEFTTQILYHNNKALTLPSKEIKL
LSLLLKNKNNFLSTERIFEELWDYDEEPSELSLRAYVKNLRKILGKEKIINQRGRGYCYG

Specific function: Member of the two-component regulatory system rprX/rprY [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=218, Percent_Identity=30.7339449541284, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1790552, Length=216, Percent_Identity=31.9444444444444, Blast_Score=110, Evalue=8e-26,
Organism=Escherichia coli, GI87082012, Length=221, Percent_Identity=30.316742081448, Blast_Score=107, Evalue=6e-25,
Organism=Escherichia coli, GI1786784, Length=220, Percent_Identity=30, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI1786599, Length=226, Percent_Identity=25.6637168141593, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1786911, Length=225, Percent_Identity=27.1111111111111, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1789809, Length=208, Percent_Identity=26.9230769230769, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI2367329, Length=227, Percent_Identity=30.8370044052863, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1790860, Length=221, Percent_Identity=28.5067873303167, Blast_Score=87, Evalue=7e-19,
Organism=Escherichia coli, GI1787375, Length=221, Percent_Identity=24.8868778280543, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787229, Length=225, Percent_Identity=25.7777777777778, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1788394, Length=209, Percent_Identity=26.7942583732057, Blast_Score=80, Evalue=8e-17,
Organism=Escherichia coli, GI1790863, Length=231, Percent_Identity=24.2424242424242, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1790437, Length=122, Percent_Identity=30.327868852459, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1788550, Length=116, Percent_Identity=28.448275862069, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1790299, Length=123, Percent_Identity=28.4552845528455, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25634; Mature: 25502

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAKILLLEDDLSLSEIIEEFLNDEGYEVFLCDNAQEALDMAYERYFDLWILDVKVPLGD
CCEEEEEEECCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHEEEEEEEECCCC
GFSLLKELRKSGKQTPAIFMTSLNTTNDLKQGFDAGCDDYIKKPFELAELSIRVKALLKR
CHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHH
AFSHKNEDFEDLGDGFRFEFTTQILYHNNKALTLPSKEIKLLSLLLKNKNNFLSTERIFE
HHHCCCCCHHHHCCCCEEEEEEEEEEECCEEEECCHHHHHHHHHHHHCCCCCHHHHHHHH
ELWDYDEEPSELSLRAYVKNLRKILGKEKIINQRGRGYCYG
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AAKILLLEDDLSLSEIIEEFLNDEGYEVFLCDNAQEALDMAYERYFDLWILDVKVPLGD
CEEEEEEECCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHEEEEEEEECCCC
GFSLLKELRKSGKQTPAIFMTSLNTTNDLKQGFDAGCDDYIKKPFELAELSIRVKALLKR
CHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHH
AFSHKNEDFEDLGDGFRFEFTTQILYHNNKALTLPSKEIKLLSLLLKNKNNFLSTERIFE
HHHCCCCCHHHHCCCCEEEEEEEEEEECCEEEECCHHHHHHHHHHHHCCCCCHHHHHHHH
ELWDYDEEPSELSLRAYVKNLRKILGKEKIINQRGRGYCYG
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8469117 [H]