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The map label for this gene is gpsA [H]

Identifier: 57238068

GI number: 57238068

Start: 1245790

End: 1246683

Strand: Reverse

Name: gpsA [H]

Synonym: CJE1330

Alternate gene names: 57238068

Gene position: 1246683-1245790 (Counterclockwise)

Preceding gene: 57238069

Following gene: 57238067

Centisome position: 70.12

GC content: 32.55

Gene sequence:

>894_bases
ATGCGTATAGCGGTTATTGGTGCGGGAAAATGGGGCAGTGCTTTACATCTAGCCTTAAAAGAAAATCACAATTGTTTTAT
CAGTTCTTTGCATCAGCGTGATTTAGAAGATTTTGTTAGCATAAAAGAAGCTTTAGAATGTGAATATCTTGTTTTTGCTT
TAAGTTCTCAAGGGATGCGTGCTTGGCTTAAAGAAAATTTCATCAACAAGGGACAAAAAATTTTAATTGCTTCAAAAGGC
ATAGAAGATCAAAGTTGTCAATTTTTAGATGAAATTTTTTTAGATTTTGTACCAAAAGAAAATTTTTGTGTTTTAAGCGG
TCCTTCTTTTGCTGCTGAAGTGATGCAAAAACTTCCTACTGCTTTGATGATTAGTGGGATAAATCAAGAGCTTTGTAAAA
AATTTGCAAGTTTTTTCCCTGATTTTATTAAAACTTATATTGATAATGATGTTCGTGGTGCTGAAATTTGTGGTGCTTAT
AAGAATGTTTTAGCAATTGCAAGTGGGATTAGTGATGGGTTAAAACTTGGTAATAATGCAAGAGCAGCACTGATTTCAAG
AGGACTTATAGAAATGCATCGTTTTGGTAAATTTTTTGGCACTAAAGAAGAAACTTTTTTAGGATTGAGTGGGGCAGGGG
ATTTGTTTTTAACTGCAACGAGTGTTTTATCAAGAAATTATAGAGTGGGTTTAAAACTGGCGCAAAATCAAAAATTAGAT
AGTATTTTAGCCGAACTTAATGAAGTAGCAGAAGGTGTAAAAACTGCTTATGCTATAGAAAAACTAGCAAAAATGAAAGG
AATTTATACACCTATTGTAAATGAAGTAGTGGCAATTTTTAAGGGTAAAAGCGTGCAAGAAGCAACGCAGAATTTATTAA
AGCAAAATGATTAA

Upstream 100 bases:

>100_bases
AGAAGCTTTTTGGATTCTTTGTAGGTCAAACCATGAAAGAAGGCAAAGGAGCTTTTAATCCTGCAAAAGTAAATGAAATT
TTAAAAACAAAGCTTGGTTG

Downstream 100 bases:

>100_bases
GGAAAAATCATGATAATTAAAAATGCAAAAATTTATGGAGATTCTTTACAAGATATAGAGATTAAAGAAGGAAAAATTAC
CAATATTGGTTCTAATTTAC

Product: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [H]

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MRIAVIGAGKWGSALHLALKENHNCFISSLHQRDLEDFVSIKEALECEYLVFALSSQGMRAWLKENFINKGQKILIASKG
IEDQSCQFLDEIFLDFVPKENFCVLSGPSFAAEVMQKLPTALMISGINQELCKKFASFFPDFIKTYIDNDVRGAEICGAY
KNVLAIASGISDGLKLGNNARAALISRGLIEMHRFGKFFGTKEETFLGLSGAGDLFLTATSVLSRNYRVGLKLAQNQKLD
SILAELNEVAEGVKTAYAIEKLAKMKGIYTPIVNEVVAIFKGKSVQEATQNLLKQND

Sequences:

>Translated_297_residues
MRIAVIGAGKWGSALHLALKENHNCFISSLHQRDLEDFVSIKEALECEYLVFALSSQGMRAWLKENFINKGQKILIASKG
IEDQSCQFLDEIFLDFVPKENFCVLSGPSFAAEVMQKLPTALMISGINQELCKKFASFFPDFIKTYIDNDVRGAEICGAY
KNVLAIASGISDGLKLGNNARAALISRGLIEMHRFGKFFGTKEETFLGLSGAGDLFLTATSVLSRNYRVGLKLAQNQKLD
SILAELNEVAEGVKTAYAIEKLAKMKGIYTPIVNEVVAIFKGKSVQEATQNLLKQND
>Mature_297_residues
MRIAVIGAGKWGSALHLALKENHNCFISSLHQRDLEDFVSIKEALECEYLVFALSSQGMRAWLKENFINKGQKILIASKG
IEDQSCQFLDEIFLDFVPKENFCVLSGPSFAAEVMQKLPTALMISGINQELCKKFASFFPDFIKTYIDNDVRGAEICGAY
KNVLAIASGISDGLKLGNNARAALISRGLIEMHRFGKFFGTKEETFLGLSGAGDLFLTATSVLSRNYRVGLKLAQNQKLD
SILAELNEVAEGVKTAYAIEKLAKMKGIYTPIVNEVVAIFKGKSVQEATQNLLKQND

Specific function: De novo phospholipid biosynthesis; glycerol-3 phosphate formation. [C]

COG id: COG0240

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI24307999, Length=157, Percent_Identity=33.1210191082803, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI33695088, Length=157, Percent_Identity=33.7579617834395, Blast_Score=68, Evalue=8e-12,
Organism=Escherichia coli, GI1790037, Length=324, Percent_Identity=30.2469135802469, Blast_Score=148, Evalue=3e-37,
Organism=Saccharomyces cerevisiae, GI6320181, Length=196, Percent_Identity=30.1020408163265, Blast_Score=67, Evalue=5e-12,
Organism=Drosophila melanogaster, GI17136200, Length=146, Percent_Identity=34.2465753424658, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI17136204, Length=146, Percent_Identity=34.2465753424658, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI17136202, Length=146, Percent_Identity=34.2465753424658, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR006168
- InterPro:   IPR006109
- InterPro:   IPR011128
- InterPro:   IPR016040 [H]

Pfam domain/function: PF07479 NAD_Gly3P_dh_C; PF01210 NAD_Gly3P_dh_N [H]

EC number: =1.1.1.94 [H]

Molecular weight: Translated: 32733; Mature: 32733

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: PS00957 NAD_G3PDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIAVIGAGKWGSALHLALKENHNCFISSLHQRDLEDFVSIKEALECEYLVFALSSQGMR
CEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHH
AWLKENFINKGQKILIASKGIEDQSCQFLDEIFLDFVPKENFCVLSGPSFAAEVMQKLPT
HHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCH
ALMISGINQELCKKFASFFPDFIKTYIDNDVRGAEICGAYKNVLAIASGISDGLKLGNNA
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH
RAALISRGLIEMHRFGKFFGTKEETFLGLSGAGDLFLTATSVLSRNYRVGLKLAQNQKLD
HHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCHH
SILAELNEVAEGVKTAYAIEKLAKMKGIYTPIVNEVVAIFKGKSVQEATQNLLKQND
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MRIAVIGAGKWGSALHLALKENHNCFISSLHQRDLEDFVSIKEALECEYLVFALSSQGMR
CEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHH
AWLKENFINKGQKILIASKGIEDQSCQFLDEIFLDFVPKENFCVLSGPSFAAEVMQKLPT
HHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCH
ALMISGINQELCKKFASFFPDFIKTYIDNDVRGAEICGAYKNVLAIASGISDGLKLGNNA
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH
RAALISRGLIEMHRFGKFFGTKEETFLGLSGAGDLFLTATSVLSRNYRVGLKLAQNQKLD
HHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCHH
SILAELNEVAEGVKTAYAIEKLAKMKGIYTPIVNEVVAIFKGKSVQEATQNLLKQND
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA