| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238050
Identifier: 57238050
GI number: 57238050
Start: 1225399
End: 1227042
Strand: Reverse
Name: 57238050
Synonym: CJE1312
Alternate gene names: NA
Gene position: 1227042-1225399 (Counterclockwise)
Preceding gene: 57238051
Following gene: 57238049
Centisome position: 69.02
GC content: 30.11
Gene sequence:
>1644_bases ATGAAAATTTTACTTTTAAATGAAAACCCTGTAGTTTCAAGACTTGTAAGCCTTAGTGCTAAAAAAATGTCTTATGATTT TGAAGAACTTAATGCTTATAGTGAAAATTTGGGTAATTATGATGTGATTGTTGTAGATAGTGATACTCCAGCACCTTTAA AAATTCTTAAAGAAAAATGCGATAGATTGATTTTTTTAGCCCCGCGAAATCAAAATGTAGAAGATATAGATGCGCAAATT TTACAAAAACCTTTTTTACCTACAGATTTTTTAAATTTACTTAATAATAAAGATGCGAACAAGCATACATCTATTGATTT GCCAATGTTAAGCAATGATGAAAATCCTTATGCTGATATAAGCTTGGATTTAGATAATTTAAATTTAGATGATTTGCCTG ATGAAAATTCTTTAGATATAAATTCAGAGGGAATGGAAGATTTGAGTTTTGATGATGATGCTCAAGATGATAATGCAAAC AAAACTTTAGAAACTCAAAATTTAGAACATGACAATTTAGAACAAGAAACAATTAAAGAACAGACTCAAGAAGACACTCA AACTGATTTAGATTTAACTTTAGAAGATAGTGAAAGCGAAAAAGAAGACTTAAGCCAAGAACATACAGCTTTGGATACTG AGCCTAGTTTAGATGAGCTAGATGATAAAAATGATGAAGATTTAGAAATCAAAGAAGATGATAAAAATGAAGAAATAGAA AAGCAAGAATTATTAGACGATTCTAAAACAAATACATTAGAAATGCAAGAAGAGCTTAGCGAATCTCAAGATGATAATGC AAACAAAACTTTAGAAACTCAAAATTTAGAACATGACAATTTAGAACAAGAAACAATTAAAGAACAGACTCAAGAAGACA CTCAAACTGATTTAGATTTAACTTTAGAAGATGGTGAAAGCGAAAAAGAAGACTTAAGCCAAGAACATACAGCTTTGGAT ACTGAGCCTAGTTTAGATGAGCTAGATGATAAAAATGATGAAGATTTAGAAGATAATAAAGAATTACAAGCTAATATAAG CGATTTTGATGATCTTCCTGAGGTTGAAGAGCAAGAAAAAGAAATGGATTTTGATGATCTTCCTGAGGATGCTGAATTTT TAGGTCAAGCAAAATATAATGAAGAATCAGAGGAAAATTTAGAGGAGTTTGCTCCTGTTGTGGAAGAAGATGTTCAAGAT GAAATAGATGATTTTGCTTCAAATTTGAGTACTCAAGATCAAATCAAAGAAGAACTAGCTCAACTTGATGAGCTTGATTA TGGTATTGATAGTGACAATAGTAGCAAGGTCTTAGAAGATTTTAAAGATGAACCAATTTTAGACGATAAAGAATTAGGAA CAAATGAAGAGGAAGTGGTTGTGCCAAATTTAAATATAAGTGATTTTGATACATTGAAAGAAAGTGATATACAAGAAGCT CTTGGAGAGGAAATCTTAGAAAAAAATGAAGAGCCTATAGTAAGTGATGTAACTAAAGATGATAATAGCGAAGAGATAGT TAATGAGCTTAGCCAAAGCATAGCAGGAGCGATCACTTCAAGTATTAAAGATGATACCTTAAAAGCTGCTCTTAAGGGTA TGAATATGAATATAAATATAAACATTAGTTTTAAAGAGGATTGA
Upstream 100 bases:
>100_bases TTTTAGAACTTTTTACTCATATGCAAACTCTTTTTTTCTCCTAAGGAAAGGATAAATGAAATTATCGTAAAATAGCGATT ATTTTTTAAGGATTAAAGTG
Downstream 100 bases:
>100_bases AATTGCAAGGTTTTGTTTTGTTGATTTCAGGTCCTAGTGGTGCTGGAAAATCAACTCTTTTAAAAAAACTTTTTGATGAA TTTGAAGATGAGCTTTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MKILLLNENPVVSRLVSLSAKKMSYDFEELNAYSENLGNYDVIVVDSDTPAPLKILKEKCDRLIFLAPRNQNVEDIDAQI LQKPFLPTDFLNLLNNKDANKHTSIDLPMLSNDENPYADISLDLDNLNLDDLPDENSLDINSEGMEDLSFDDDAQDDNAN KTLETQNLEHDNLEQETIKEQTQEDTQTDLDLTLEDSESEKEDLSQEHTALDTEPSLDELDDKNDEDLEIKEDDKNEEIE KQELLDDSKTNTLEMQEELSESQDDNANKTLETQNLEHDNLEQETIKEQTQEDTQTDLDLTLEDGESEKEDLSQEHTALD TEPSLDELDDKNDEDLEDNKELQANISDFDDLPEVEEQEKEMDFDDLPEDAEFLGQAKYNEESEENLEEFAPVVEEDVQD EIDDFASNLSTQDQIKEELAQLDELDYGIDSDNSSKVLEDFKDEPILDDKELGTNEEEVVVPNLNISDFDTLKESDIQEA LGEEILEKNEEPIVSDVTKDDNSEEIVNELSQSIAGAITSSIKDDTLKAALKGMNMNININISFKED
Sequences:
>Translated_547_residues MKILLLNENPVVSRLVSLSAKKMSYDFEELNAYSENLGNYDVIVVDSDTPAPLKILKEKCDRLIFLAPRNQNVEDIDAQI LQKPFLPTDFLNLLNNKDANKHTSIDLPMLSNDENPYADISLDLDNLNLDDLPDENSLDINSEGMEDLSFDDDAQDDNAN KTLETQNLEHDNLEQETIKEQTQEDTQTDLDLTLEDSESEKEDLSQEHTALDTEPSLDELDDKNDEDLEIKEDDKNEEIE KQELLDDSKTNTLEMQEELSESQDDNANKTLETQNLEHDNLEQETIKEQTQEDTQTDLDLTLEDGESEKEDLSQEHTALD TEPSLDELDDKNDEDLEDNKELQANISDFDDLPEVEEQEKEMDFDDLPEDAEFLGQAKYNEESEENLEEFAPVVEEDVQD EIDDFASNLSTQDQIKEELAQLDELDYGIDSDNSSKVLEDFKDEPILDDKELGTNEEEVVVPNLNISDFDTLKESDIQEA LGEEILEKNEEPIVSDVTKDDNSEEIVNELSQSIAGAITSSIKDDTLKAALKGMNMNININISFKED >Mature_547_residues MKILLLNENPVVSRLVSLSAKKMSYDFEELNAYSENLGNYDVIVVDSDTPAPLKILKEKCDRLIFLAPRNQNVEDIDAQI LQKPFLPTDFLNLLNNKDANKHTSIDLPMLSNDENPYADISLDLDNLNLDDLPDENSLDINSEGMEDLSFDDDAQDDNAN KTLETQNLEHDNLEQETIKEQTQEDTQTDLDLTLEDSESEKEDLSQEHTALDTEPSLDELDDKNDEDLEIKEDDKNEEIE KQELLDDSKTNTLEMQEELSESQDDNANKTLETQNLEHDNLEQETIKEQTQEDTQTDLDLTLEDGESEKEDLSQEHTALD TEPSLDELDDKNDEDLEDNKELQANISDFDDLPEVEEQEKEMDFDDLPEDAEFLGQAKYNEESEENLEEFAPVVEEDVQD EIDDFASNLSTQDQIKEELAQLDELDYGIDSDNSSKVLEDFKDEPILDDKELGTNEEEVVVPNLNISDFDTLKESDIQEA LGEEILEKNEEPIVSDVTKDDNSEEIVNELSQSIAGAITSSIKDDTLKAALKGMNMNININISFKED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62225; Mature: 62225
Theoretical pI: Translated: 3.53; Mature: 3.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILLLNENPVVSRLVSLSAKKMSYDFEELNAYSENLGNYDVIVVDSDTPAPLKILKEKC CEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHH DRLIFLAPRNQNVEDIDAQILQKPFLPTDFLNLLNNKDANKHTSIDLPMLSNDENPYADI CCEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEECCCEECCCCCCCEEE SLDLDNLNLDDLPDENSLDINSEGMEDLSFDDDAQDDNANKTLETQNLEHDNLEQETIKE EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH QTQEDTQTDLDLTLEDSESEKEDLSQEHTALDTEPSLDELDDKNDEDLEIKEDDKNEEIE HHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEECCCCCCHHHH KQELLDDSKTNTLEMQEELSESQDDNANKTLETQNLEHDNLEQETIKEQTQEDTQTDLDL HHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCEE TLEDGESEKEDLSQEHTALDTEPSLDELDDKNDEDLEDNKELQANISDFDDLPEVEEQEK EECCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHH EMDFDDLPEDAEFLGQAKYNEESEENLEEFAPVVEEDVQDEIDDFASNLSTQDQIKEELA CCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH QLDELDYGIDSDNSSKVLEDFKDEPILDDKELGTNEEEVVVPNLNISDFDTLKESDIQEA HHHHHCCCCCCCCCHHHHHHHCCCCCCCCHHCCCCCCEEEECCCCCCHHHHHHHHHHHHH LGEEILEKNEEPIVSDVTKDDNSEEIVNELSQSIAGAITSSIKDDTLKAALKGMNMNINI HHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE NISFKED EEEECCC >Mature Secondary Structure MKILLLNENPVVSRLVSLSAKKMSYDFEELNAYSENLGNYDVIVVDSDTPAPLKILKEKC CEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHH DRLIFLAPRNQNVEDIDAQILQKPFLPTDFLNLLNNKDANKHTSIDLPMLSNDENPYADI CCEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEECCCEECCCCCCCEEE SLDLDNLNLDDLPDENSLDINSEGMEDLSFDDDAQDDNANKTLETQNLEHDNLEQETIKE EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH QTQEDTQTDLDLTLEDSESEKEDLSQEHTALDTEPSLDELDDKNDEDLEIKEDDKNEEIE HHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEECCCCCCHHHH KQELLDDSKTNTLEMQEELSESQDDNANKTLETQNLEHDNLEQETIKEQTQEDTQTDLDL HHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCEE TLEDGESEKEDLSQEHTALDTEPSLDELDDKNDEDLEDNKELQANISDFDDLPEVEEQEK EECCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHH EMDFDDLPEDAEFLGQAKYNEESEENLEEFAPVVEEDVQDEIDDFASNLSTQDQIKEELA CCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH QLDELDYGIDSDNSSKVLEDFKDEPILDDKELGTNEEEVVVPNLNISDFDTLKESDIQEA HHHHHCCCCCCCCCHHHHHHHCCCCCCCCHHCCCCCCEEEECCCCCCHHHHHHHHHHHHH LGEEILEKNEEPIVSDVTKDDNSEEIVNELSQSIAGAITSSIKDDTLKAALKGMNMNINI HHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE NISFKED EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA