| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is jlpA
Identifier: 57237810
GI number: 57237810
Start: 994722
End: 995840
Strand: Direct
Name: jlpA
Synonym: CJE1065
Alternate gene names: NA
Gene position: 994722-995840 (Clockwise)
Preceding gene: 57237807
Following gene: 57237811
Centisome position: 55.95
GC content: 27.61
Gene sequence:
>1119_bases ATGAAAAAAGGTATTTTTCTCTCTATTGGAATAGCTGTTTTGTTTTCAGCTTGCGGAAATTCCATAGATGAAAAAACAGT TAAAAAATATGAAAATCAACTAAATCAAACAGTTAAACAAGAAATTGCAAGTCTTTCTCAGGACTCTGGAATAAAGATTG AATTTTCTGATTTTAAATGCAATGCAGATGGTGATTTTATAGCGTGTTTAAGTCCAAATTTCAAAACTCTTGCAAAAGAT AATAACGATGAGTATCAAGAACTATTTCAAGCAAAAAATATCAAAATTCGTTCAAATGAAATTTACAAAGGCGAAGCAAA TACATCAATTAGCATTAAAGAATATTACAACGATCTTTTTAAAAACCAAAAAAGCATACAATCAAATTTGGTTTTTGAAG ATTTTAAACTTGGAGAAAAAGTTGTTAGTGACATCAATGCAAGCTTATTTCAACAAGATCCAAAAATCAGATCTTTTATC AATAAATTAAGCTCAGATTCTTATACTTTATCATTTGACAACTCCATCAACAAACAGGAAAACAATTATATAGATAATCT TGATATAAAATTTTATAACGCAAAATTAAATTTCAATACAAATTTAAATATAAATCTAAAAGAAGATTTGCTTAATTACC TTGATTCTAAGGGTATAAAATTTAACACTCAAACTTTAGCTATGGATGAACAAGCTATCAATGAACTTCTTAATATAGCA AACTACGAACAAGCTTCAGATTTTAGCAATACAATCCAAAAATACATCATCTTAAACAATTTTAAAATTGATTCAACTCT TAAAACCGAAGGCGTATTTAGTAGCTATATAACAACTGCTAAGGAAAATTTACAAACCTTAAAAACTCAAAGTCAAAATG AAGAACAAGCATTAATCTTTGATAAAGCTTTAGCTATTTTAAACAATATCACTCAAAACGATGATTATAAACTCAATCTT GATTTAAAATTTAAAAACATCCCTGTTAGTGACTATAGCACACAGGGAATCGACAGTATAGAAAAACTGAGCATCAACAA TCAAGATGGCACAGAAGCGTTAAAAATTATACTTCCATTTATCATGTTTTCTATGTTAATGGGCGGAGCGTCATTTTAA
Upstream 100 bases:
>100_bases TGTGTAAAAATGTAATTAATCACACACTCTCTTTTAGTATTGTTTAAATTTTAAGTAAAAAAAGATATAATCTTTTTTTA AATTTTTTAAGGAGAAAACT
Downstream 100 bases:
>100_bases ATTTTAAAATGATAAAAACTTCAAAAACATTAAAAGCAAGATTAAATTCTTTGCTCTTAATGTTTTCATAACATTAACAA AAAAGGCTAAAATGAAAATT
Product: surface-exposed lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MKKGIFLSIGIAVLFSACGNSIDEKTVKKYENQLNQTVKQEIASLSQDSGIKIEFSDFKCNADGDFIACLSPNFKTLAKD NNDEYQELFQAKNIKIRSNEIYKGEANTSISIKEYYNDLFKNQKSIQSNLVFEDFKLGEKVVSDINASLFQQDPKIRSFI NKLSSDSYTLSFDNSINKQENNYIDNLDIKFYNAKLNFNTNLNINLKEDLLNYLDSKGIKFNTQTLAMDEQAINELLNIA NYEQASDFSNTIQKYIILNNFKIDSTLKTEGVFSSYITTAKENLQTLKTQSQNEEQALIFDKALAILNNITQNDDYKLNL DLKFKNIPVSDYSTQGIDSIEKLSINNQDGTEALKIILPFIMFSMLMGGASF
Sequences:
>Translated_372_residues MKKGIFLSIGIAVLFSACGNSIDEKTVKKYENQLNQTVKQEIASLSQDSGIKIEFSDFKCNADGDFIACLSPNFKTLAKD NNDEYQELFQAKNIKIRSNEIYKGEANTSISIKEYYNDLFKNQKSIQSNLVFEDFKLGEKVVSDINASLFQQDPKIRSFI NKLSSDSYTLSFDNSINKQENNYIDNLDIKFYNAKLNFNTNLNINLKEDLLNYLDSKGIKFNTQTLAMDEQAINELLNIA NYEQASDFSNTIQKYIILNNFKIDSTLKTEGVFSSYITTAKENLQTLKTQSQNEEQALIFDKALAILNNITQNDDYKLNL DLKFKNIPVSDYSTQGIDSIEKLSINNQDGTEALKIILPFIMFSMLMGGASF >Mature_372_residues MKKGIFLSIGIAVLFSACGNSIDEKTVKKYENQLNQTVKQEIASLSQDSGIKIEFSDFKCNADGDFIACLSPNFKTLAKD NNDEYQELFQAKNIKIRSNEIYKGEANTSISIKEYYNDLFKNQKSIQSNLVFEDFKLGEKVVSDINASLFQQDPKIRSFI NKLSSDSYTLSFDNSINKQENNYIDNLDIKFYNAKLNFNTNLNINLKEDLLNYLDSKGIKFNTQTLAMDEQAINELLNIA NYEQASDFSNTIQKYIILNNFKIDSTLKTEGVFSSYITTAKENLQTLKTQSQNEEQALIFDKALAILNNITQNDDYKLNL DLKFKNIPVSDYSTQGIDSIEKLSINNQDGTEALKIILPFIMFSMLMGGASF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42254; Mature: 42254
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGIFLSIGIAVLFSACGNSIDEKTVKKYENQLNQTVKQEIASLSQDSGIKIEFSDFKC CCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECEEE NADGDFIACLSPNFKTLAKDNNDEYQELFQAKNIKIRSNEIYKGEANTSISIKEYYNDLF CCCCCEEEEECCCCHHHHCCCCHHHHHHHHHCCEEEECCEEEECCCCCEEEHHHHHHHHH KNQKSIQSNLVFEDFKLGEKVVSDINASLFQQDPKIRSFINKLSSDSYTLSFDNSINKQE HCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCCCCC NNYIDNLDIKFYNAKLNFNTNLNINLKEDLLNYLDSKGIKFNTQTLAMDEQAINELLNIA CCCCCCCEEEEEEEEEEECCCEEEEEHHHHHHHHHCCCCEECCCEEEHHHHHHHHHHHHC NYEQASDFSNTIQKYIILNNFKIDSTLKTEGVFSSYITTAKENLQTLKTQSQNEEQALIF CCHHHHHHHHHHHHHHEEECEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH DKALAILNNITQNDDYKLNLDLKFKNIPVSDYSTQGIDSIEKLSINNQDGTEALKIILPF HHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHH IMFSMLMGGASF HHHHHHHCCCCC >Mature Secondary Structure MKKGIFLSIGIAVLFSACGNSIDEKTVKKYENQLNQTVKQEIASLSQDSGIKIEFSDFKC CCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECEEE NADGDFIACLSPNFKTLAKDNNDEYQELFQAKNIKIRSNEIYKGEANTSISIKEYYNDLF CCCCCEEEEECCCCHHHHCCCCHHHHHHHHHCCEEEECCEEEECCCCCEEEHHHHHHHHH KNQKSIQSNLVFEDFKLGEKVVSDINASLFQQDPKIRSFINKLSSDSYTLSFDNSINKQE HCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCCCCC NNYIDNLDIKFYNAKLNFNTNLNINLKEDLLNYLDSKGIKFNTQTLAMDEQAINELLNIA CCCCCCCEEEEEEEEEEECCCEEEEEHHHHHHHHHCCCCEECCCEEEHHHHHHHHHHHHC NYEQASDFSNTIQKYIILNNFKIDSTLKTEGVFSSYITTAKENLQTLKTQSQNEEQALIF CCHHHHHHHHHHHHHHEEECEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH DKALAILNNITQNDDYKLNLDLKFKNIPVSDYSTQGIDSIEKLSINNQDGTEALKIILPF HHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHH IMFSMLMGGASF HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7730270; 10688204 [H]