Definition Campylobacter jejuni RM1221, complete genome.
Accession NC_003912
Length 1,777,831

Click here to switch to the map view.

The map label for this gene is yaaA [C]

Identifier: 57237811

GI number: 57237811

Start: 995932

End: 996672

Strand: Direct

Name: yaaA [C]

Synonym: CJE1066

Alternate gene names: 57237811

Gene position: 995932-996672 (Clockwise)

Preceding gene: 57237810

Following gene: 57237814

Centisome position: 56.02

GC content: 27.26

Gene sequence:

>741_bases
ATGAAAATTTTATTCTCCCCTAGTGAAAGCAAAAATGAAAATTGTACAAAAAATCCCATCGATGAAAACTCATTTATATT
TAAAGAATTATTTCCTTATAGAATGGAAGCTTTAAAGCATTATGGAGAATTTATCAAAAATGCAAGTTTAAAAAATTTAC
AAGAACTTTTTGGCATTAAAAACGAAAATGAAATTGATAAATTTAAACACGACTTAAAACAAGCTCCCACTCAAGAAGCT
ATAATGCTTTACACTGGGGTAAGTTATGAATATCTTAATTTTAAAGCTTTAGATAAAAAAAGTCAAGCTTATATTTTAGA
AAATACTCTTATATTTTCTAATCTTTTTGGCGTTGTAAGAGCTAATGATACCCTACCCTTTTATAAATTCAAGCAAGGGG
CTAAAATAGGAAATTTTACCATAGAGAAATTTTATAAAGAACATTTTAGTAAAGCCTTAGATGAATACTTGGAAAATGAA
GAAATACTTGATCTTAGAGCAGGATTTTATGATAAATTCTATACCCCAAAAAAGAAATTTTATACCTATAAATTTGTAAA
AAATGGTAAAGTCATCAGTCATTTTGCTAAAGCTTACAGGGGAATTTTACTCTCCATAAGTGCAAAAAACCAAGTAAAAA
ACAATAAAGAGCTTTTAGCAAACCTTCCTTCAAATCTAAAACTCAAAGAAATTCAAATCAAAGGTTTAAAGGAAGAAATT
GCGCTTGAAATTCTAGATTAG

Upstream 100 bases:

>100_bases
TCATTTTAAATTTTAAAATGATAAAAACTTCAAAAACATTAAAAGCAAGATTAAATTCTTTGCTCTTAATGTTTTCATAA
CATTAACAAAAAAGGCTAAA

Downstream 100 bases:

>100_bases
TTTTTATTTTAAGTATTTTAAAGCTAGCTTCGCATAATAACTTGCAGCCCTAGCTAAAAGTTTATCATTAAAAACATAAC
TAGAATTATGTAAATAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MKILFSPSESKNENCTKNPIDENSFIFKELFPYRMEALKHYGEFIKNASLKNLQELFGIKNENEIDKFKHDLKQAPTQEA
IMLYTGVSYEYLNFKALDKKSQAYILENTLIFSNLFGVVRANDTLPFYKFKQGAKIGNFTIEKFYKEHFSKALDEYLENE
EILDLRAGFYDKFYTPKKKFYTYKFVKNGKVISHFAKAYRGILLSISAKNQVKNNKELLANLPSNLKLKEIQIKGLKEEI
ALEILD

Sequences:

>Translated_246_residues
MKILFSPSESKNENCTKNPIDENSFIFKELFPYRMEALKHYGEFIKNASLKNLQELFGIKNENEIDKFKHDLKQAPTQEA
IMLYTGVSYEYLNFKALDKKSQAYILENTLIFSNLFGVVRANDTLPFYKFKQGAKIGNFTIEKFYKEHFSKALDEYLENE
EILDLRAGFYDKFYTPKKKFYTYKFVKNGKVISHFAKAYRGILLSISAKNQVKNNKELLANLPSNLKLKEIQIKGLKEEI
ALEILD
>Mature_246_residues
MKILFSPSESKNENCTKNPIDENSFIFKELFPYRMEALKHYGEFIKNASLKNLQELFGIKNENEIDKFKHDLKQAPTQEA
IMLYTGVSYEYLNFKALDKKSQAYILENTLIFSNLFGVVRANDTLPFYKFKQGAKIGNFTIEKFYKEHFSKALDEYLENE
EILDLRAGFYDKFYTPKKKFYTYKFVKNGKVISHFAKAYRGILLSISAKNQVKNNKELLANLPSNLKLKEIQIKGLKEEI
ALEILD

Specific function: Unknown

COG id: COG3022

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005583 [H]

Pfam domain/function: PF03883 DUF328 [H]

EC number: NA

Molecular weight: Translated: 28758; Mature: 28758

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILFSPSESKNENCTKNPIDENSFIFKELFPYRMEALKHYGEFIKNASLKNLQELFGIK
CEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
NENEIDKFKHDLKQAPTQEAIMLYTGVSYEYLNFKALDKKSQAYILENTLIFSNLFGVVR
CCCHHHHHHHHHHHCCCCCEEEEEECCCEEEECEEEECCCCCEEEHHHHHHHHHHHHHEE
ANDTLPFYKFKQGAKIGNFTIEKFYKEHFSKALDEYLENEEILDLRAGFYDKFYTPKKKF
CCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCHHE
YTYKFVKNGKVISHFAKAYRGILLSISAKNQVKNNKELLANLPSNLKLKEIQIKGLKEEI
EEEEEEECCHHHHHHHHHHHCEEEEEECHHHHCCCHHHHHCCCCCCEEEEHHHCCCHHHH
ALEILD
HHEECC
>Mature Secondary Structure
MKILFSPSESKNENCTKNPIDENSFIFKELFPYRMEALKHYGEFIKNASLKNLQELFGIK
CEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
NENEIDKFKHDLKQAPTQEAIMLYTGVSYEYLNFKALDKKSQAYILENTLIFSNLFGVVR
CCCHHHHHHHHHHHCCCCCEEEEEECCCEEEECEEEECCCCCEEEHHHHHHHHHHHHHEE
ANDTLPFYKFKQGAKIGNFTIEKFYKEHFSKALDEYLENEEILDLRAGFYDKFYTPKKKF
CCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCHHE
YTYKFVKNGKVISHFAKAYRGILLSISAKNQVKNNKELLANLPSNLKLKEIQIKGLKEEI
EEEEEEECCHHHHHHHHHHHCEEEEEECHHHHCCCHHHHHCCCCCCEEEEHHHCCCHHHH
ALEILD
HHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7730270; 10688204 [H]