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The map label for this gene is pqqE [H]

Identifier: 21226890

GI number: 21226890

Start: 941401

End: 942609

Strand: Reverse

Name: pqqE [H]

Synonym: MM_0788

Alternate gene names: 21226890

Gene position: 942609-941401 (Counterclockwise)

Preceding gene: 21226891

Following gene: 21226889

Centisome position: 23.01

GC content: 45.0

Gene sequence:

>1209_bases
TTGCCATTAACTTTACCAGGTGTATCCATGAAAGTGTATGATAGTCCGGTGATTAAGGTAAACGCCAGCACTGAAAATGA
AAAGGTGGTGCTCGACGCAGAAGGACCTCTTTCCCATATTGTAAAACCCTTTCTGAAACGTATAAATAATATTTTTTCGG
AAGAAAAACCAATTTCAATAAACGAAGACGAGATTATATTTTCTACCTGGATTCCTCCTATTCCCGGCCCTGTTTTTAGC
CGGGTTATAAGCGCTGAAATTGCAGCCATAAGGAAAAAACGTGTCCCGGATCAATTTACAATAGGGATTACTGCCCGATG
TCCAAATAACTGTATCCACTGTGGGGCAGCCGGCATAAAGCCTGAAAAGGAATTGACGCTTGATGAAATCTGCAATGCTG
TTGATCAGAGCATTGAACTTGGGTCCTATCTGGTCGCCTTCGACGGCGGAGAGACGATGATCAGAAACGATCTCGTTGAT
ATGGTCTCAAGGGTAGACAAAACAAAAGCAATTGCCACATGTTTGACTTCAGGCTTCAAACTATCCGAAGAGCGAGCTGC
TGCACTTAAAGCTGCAGGCCTGTATGCCGCCAGGATCAGCCTGGACAGTCCTCTTGAAGCCGAGCATGACCGTATCAGAG
GTCGTAACGGCGCATACAGAGACGCGATCGACGGGATTAAAAATGCAGATGCTGCCGGAATCCTTACAGACATGTTTGTT
GTTGTTTCCCCGCACAATATTGATGATCTTGAAGATTTCTATTCCCTCGCAGCTGAGCTGAACGTAAAAGAAATGTCAAT
TTATGAAATCATTGCAGTAGGACGCTGGCTTGAACACGAGGATGAAGTAATAAGCGATAAGGATGTATCCAGGCTTAAGG
ATTTCCAGATAACAATGAACAACAAACCTGAAGGTCCCAGGGTCACAGCTTTTCCCTATTTTATGGGTCCTGAGCTTTTC
GGGTGCTTTGCTGGAAGGCGCTGGATGCATGTTGCATCTGACGGAGAGGTCATGCCCTGTGCGTATACTCCGCTTTCTTT
TGGAAACATATGCGAGGAGCCTCTGGAAACTATCTGGAAGCGCATGGGTAAACACAGCGCGTATAAGAAAGATAATGCAG
CTTACTGCATGATGCGAAATCCGGATTTCAGGAAGAAGTATATACATACCATCCCCACCGGATCCAGAATTCCATACAGG
GTTAAATAA

Upstream 100 bases:

>100_bases
TGGTTCTCTAAAATGAATTGGTTCTATCTAATTTCTACATCTACAATCTTAGAATGATATTATTTGATCTCTTAACTAAA
AACCCTGGCAGGCTTCAGCT

Downstream 100 bases:

>100_bases
AACCTTTTAAGTTAATTAAATCTTTAAAATTTAATTAAAGATTTTAATTCACTTATTTTAATTAATCTATTTTTAATTCA
CTTATTTTAACTAATATATT

Product: metallo cofactor biosynthesis protein

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MPLTLPGVSMKVYDSPVIKVNASTENEKVVLDAEGPLSHIVKPFLKRINNIFSEEKPISINEDEIIFSTWIPPIPGPVFS
RVISAEIAAIRKKRVPDQFTIGITARCPNNCIHCGAAGIKPEKELTLDEICNAVDQSIELGSYLVAFDGGETMIRNDLVD
MVSRVDKTKAIATCLTSGFKLSEERAAALKAAGLYAARISLDSPLEAEHDRIRGRNGAYRDAIDGIKNADAAGILTDMFV
VVSPHNIDDLEDFYSLAAELNVKEMSIYEIIAVGRWLEHEDEVISDKDVSRLKDFQITMNNKPEGPRVTAFPYFMGPELF
GCFAGRRWMHVASDGEVMPCAYTPLSFGNICEEPLETIWKRMGKHSAYKKDNAAYCMMRNPDFRKKYIHTIPTGSRIPYR
VK

Sequences:

>Translated_402_residues
MPLTLPGVSMKVYDSPVIKVNASTENEKVVLDAEGPLSHIVKPFLKRINNIFSEEKPISINEDEIIFSTWIPPIPGPVFS
RVISAEIAAIRKKRVPDQFTIGITARCPNNCIHCGAAGIKPEKELTLDEICNAVDQSIELGSYLVAFDGGETMIRNDLVD
MVSRVDKTKAIATCLTSGFKLSEERAAALKAAGLYAARISLDSPLEAEHDRIRGRNGAYRDAIDGIKNADAAGILTDMFV
VVSPHNIDDLEDFYSLAAELNVKEMSIYEIIAVGRWLEHEDEVISDKDVSRLKDFQITMNNKPEGPRVTAFPYFMGPELF
GCFAGRRWMHVASDGEVMPCAYTPLSFGNICEEPLETIWKRMGKHSAYKKDNAAYCMMRNPDFRKKYIHTIPTGSRIPYR
VK
>Mature_401_residues
PLTLPGVSMKVYDSPVIKVNASTENEKVVLDAEGPLSHIVKPFLKRINNIFSEEKPISINEDEIIFSTWIPPIPGPVFSR
VISAEIAAIRKKRVPDQFTIGITARCPNNCIHCGAAGIKPEKELTLDEICNAVDQSIELGSYLVAFDGGETMIRNDLVDM
VSRVDKTKAIATCLTSGFKLSEERAAALKAAGLYAARISLDSPLEAEHDRIRGRNGAYRDAIDGIKNADAAGILTDMFVV
VSPHNIDDLEDFYSLAAELNVKEMSIYEIIAVGRWLEHEDEVISDKDVSRLKDFQITMNNKPEGPRVTAFPYFMGPELFG
CFAGRRWMHVASDGEVMPCAYTPLSFGNICEEPLETIWKRMGKHSAYKKDNAAYCMMRNPDFRKKYIHTIPTGSRIPYRV
K

Specific function: Together With Moac, Is Involved In The Conversion Of A Guanosine Derivative (Gxp) Into Molybdopterin Precursor Z. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 44810; Mature: 44679

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLTLPGVSMKVYDSPVIKVNASTENEKVVLDAEGPLSHIVKPFLKRINNIFSEEKPISI
CCCCCCCCEEEEECCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCC
NEDEIIFSTWIPPIPGPVFSRVISAEIAAIRKKRVPDQFTIGITARCPNNCIHCGAAGIK
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEECCCCCCC
PEKELTLDEICNAVDQSIELGSYLVAFDGGETMIRNDLVDMVSRVDKTKAIATCLTSGFK
CCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LSEERAAALKAAGLYAARISLDSPLEAEHDRIRGRNGAYRDAIDGIKNADAAGILTDMFV
CCHHHHHHHHHHCEEEEEECCCCCCCHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHEEEE
VVSPHNIDDLEDFYSLAAELNVKEMSIYEIIAVGRWLEHEDEVISDKDVSRLKDFQITMN
EECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHCCEEEEEC
NKPEGPRVTAFPYFMGPELFGCFAGRRWMHVASDGEVMPCAYTPLSFGNICEEPLETIWK
CCCCCCEEEEECHHHCHHHHHHHCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHH
RMGKHSAYKKDNAAYCMMRNPDFRKKYIHTIPTGSRIPYRVK
HHCCCCCCCCCCCEEEEECCCCHHHHHHEECCCCCCCCEECC
>Mature Secondary Structure 
PLTLPGVSMKVYDSPVIKVNASTENEKVVLDAEGPLSHIVKPFLKRINNIFSEEKPISI
CCCCCCCEEEEECCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCC
NEDEIIFSTWIPPIPGPVFSRVISAEIAAIRKKRVPDQFTIGITARCPNNCIHCGAAGIK
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEECCCCCCC
PEKELTLDEICNAVDQSIELGSYLVAFDGGETMIRNDLVDMVSRVDKTKAIATCLTSGFK
CCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LSEERAAALKAAGLYAARISLDSPLEAEHDRIRGRNGAYRDAIDGIKNADAAGILTDMFV
CCHHHHHHHHHHCEEEEEECCCCCCCHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHEEEE
VVSPHNIDDLEDFYSLAAELNVKEMSIYEIIAVGRWLEHEDEVISDKDVSRLKDFQITMN
EECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHCCEEEEEC
NKPEGPRVTAFPYFMGPELFGCFAGRRWMHVASDGEVMPCAYTPLSFGNICEEPLETIWK
CCCCCCEEEEECHHHCHHHHHHHCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHH
RMGKHSAYKKDNAAYCMMRNPDFRKKYIHTIPTGSRIPYRVK
HHCCCCCCCCCCCEEEEECCCCHHHHHHEECCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA