Click here to switch to the map view.

The map label for this gene is tnpA1 [H]

Identifier: 21226889

GI number: 21226889

Start: 940161

End: 940625

Strand: Reverse

Name: tnpA1 [H]

Synonym: MM_0787

Alternate gene names: 21226889

Gene position: 940625-940161 (Counterclockwise)

Preceding gene: 21226890

Following gene: 21226888

Centisome position: 22.96

GC content: 36.13

Gene sequence:

>465_bases
TTGGAATTGAACAGTTTTAGCCATGGCTATGGTCAGATTACCTACCATCTCGTGTTGGTGCCAAAGTATCGATACAATAT
ATTCTACAGCAAGCAAATTAAAAAGGATTGTGAGTTGATCCTCAATAACATTTGTATTGAGCAAGGCTACAAGCTTCATG
CTCTTGAAATTGTAGATGATCACGTTCACTTGTTTGTGGAATTTCATCCAAGCAACTCCTTGTCAGAAGTAATTCAATAC
TTGAAAGGAGGAAGTTCTTACAGGCTTTTCAAACTTCATCCTGAACTTAAAAAACGATATTGGGGTGGAAGTCTATGGTC
AAGTGGCAAATTCTATCGATCAGTTGGAAATGTAACAGCTGACACAATCAAACATTATATAAAGGAATCACAGAAAAAAC
CGAAAACAGAAGTCAAGTCCTCTAAATCAGCAAAACCTGATCAAAGAATTATTGATGATTTCTGA

Upstream 100 bases:

>100_bases
CTTTAAATATCTAAATCCTTACTTTTTTTGTAAAATGAGCTTGATTTGGCACCATGACCATAGGAGGTGCCAGCCGCCTA
TAGCCTGGATGTGATACACG

Downstream 100 bases:

>100_bases
CCCCAGAAACCGGGCGGGCGGCCCGAAGCATACCCCATCCTTTAGGGTGGGGTGGCCGCCCGCAATTTGATTTTTAGAAT
TCCACAATTTATTTCTGTTT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MELNSFSHGYGQITYHLVLVPKYRYNIFYSKQIKKDCELILNNICIEQGYKLHALEIVDDHVHLFVEFHPSNSLSEVIQY
LKGGSSYRLFKLHPELKKRYWGGSLWSSGKFYRSVGNVTADTIKHYIKESQKKPKTEVKSSKSAKPDQRIIDDF

Sequences:

>Translated_154_residues
MELNSFSHGYGQITYHLVLVPKYRYNIFYSKQIKKDCELILNNICIEQGYKLHALEIVDDHVHLFVEFHPSNSLSEVIQY
LKGGSSYRLFKLHPELKKRYWGGSLWSSGKFYRSVGNVTADTIKHYIKESQKKPKTEVKSSKSAKPDQRIIDDF
>Mature_154_residues
MELNSFSHGYGQITYHLVLVPKYRYNIFYSKQIKKDCELILNNICIEQGYKLHALEIVDDHVHLFVEFHPSNSLSEVIQY
LKGGSSYRLFKLHPELKKRYWGGSLWSSGKFYRSVGNVTADTIKHYIKESQKKPKTEVKSSKSAKPDQRIIDDF

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 17 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002686 [H]

Pfam domain/function: PF01797 Transposase_17 [H]

EC number: NA

Molecular weight: Translated: 18004; Mature: 18004

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELNSFSHGYGQITYHLVLVPKYRYNIFYSKQIKKDCELILNNICIEQGYKLHALEIVDD
CCCCCCCCCCCEEEEEEEEEECEEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEC
HVHLFVEFHPSNSLSEVIQYLKGGSSYRLFKLHPELKKRYWGGSLWSSGKFYRSVGNVTA
CEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECHHHHHHHCCCCCCCCCHHHHHHCCCCH
DTIKHYIKESQKKPKTEVKSSKSAKPDQRIIDDF
HHHHHHHHHHCCCCHHHHHCCCCCCCCHHHCCCC
>Mature Secondary Structure
MELNSFSHGYGQITYHLVLVPKYRYNIFYSKQIKKDCELILNNICIEQGYKLHALEIVDD
CCCCCCCCCCCEEEEEEEEEECEEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEC
HVHLFVEFHPSNSLSEVIQYLKGGSSYRLFKLHPELKKRYWGGSLWSSGKFYRSVGNVTA
CEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECHHHHHHHCCCCCCCCCHHHHHHCCCCH
DTIKHYIKESQKKPKTEVKSSKSAKPDQRIIDDF
HHHHHHHHHHCCCCHHHHHCCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]