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The map label for this gene is 21226806

Identifier: 21226806

GI number: 21226806

Start: 849409

End: 849894

Strand: Direct

Name: 21226806

Synonym: MM_0704

Alternate gene names: NA

Gene position: 849409-849894 (Clockwise)

Preceding gene: 21226805

Following gene: 21226807

Centisome position: 20.74

GC content: 43.62

Gene sequence:

>486_bases
TTGAAAGTAAAGTCAAGAGTTCAGCTGAGGAAAAATATAAAGAACAAGATGCTAAAAGACCTTGAGTCCGCCTTCGGTAA
AGAAATGGAAGACCTGGAAAACAAAACACTTGAAAAGGTTACCCTTGATGAGTATTCCCTTATCCTTGTTGAAGGCAGGC
CTCTTCTGTTTGAAATAGAGGAGCATCTTTTTCCCACAGTCCGCGGAGCTCTTGAGATGGGGCTACAGAAACGCCTTGTT
GTTGTGGATAAAGGGGCAATTCGCTTTGTATCAAACGGGGCAGACATCATGGCTCCGGGGATCGTGGAAGCTGATCCCGA
TATAAAAGAAGGGGATTTTGTAATTGTAGTGGAAGAAACACACAGAAAACCTCTTGCCATAGGAAAAGCCCTTATGGAAG
GGCAGCAGATGGTTGATTCAGAATCGGGGAAAGCCATAAAGTCAATAAGCCATGTAGGTGACAAAATCTGGAGTTTTGAG
TTCTGA

Upstream 100 bases:

>100_bases
AACATCTGAGTCCGATAATATCTGAGTTTCCACATAAGCTTTAAAAGGCTCAGGACCCTATCCTATGAATAAGCTCAACC
TTTTGAAATCGGGTGATTGA

Downstream 100 bases:

>100_bases
GAGTGCCAGAAAAAAGCATTCCCCCTGGAAAAAATCCTTCTTCATAAAACTGAAAGAATCTTCGAATACAGGTCGGGAAC
CAGTGTAGCTTTATAATAGC

Product: putative RNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MKVKSRVQLRKNIKNKMLKDLESAFGKEMEDLENKTLEKVTLDEYSLILVEGRPLLFEIEEHLFPTVRGALEMGLQKRLV
VVDKGAIRFVSNGADIMAPGIVEADPDIKEGDFVIVVEETHRKPLAIGKALMEGQQMVDSESGKAIKSISHVGDKIWSFE
F

Sequences:

>Translated_161_residues
MKVKSRVQLRKNIKNKMLKDLESAFGKEMEDLENKTLEKVTLDEYSLILVEGRPLLFEIEEHLFPTVRGALEMGLQKRLV
VVDKGAIRFVSNGADIMAPGIVEADPDIKEGDFVIVVEETHRKPLAIGKALMEGQQMVDSESGKAIKSISHVGDKIWSFE
F
>Mature_161_residues
MKVKSRVQLRKNIKNKMLKDLESAFGKEMEDLENKTLEKVTLDEYSLILVEGRPLLFEIEEHLFPTVRGALEMGLQKRLV
VVDKGAIRFVSNGADIMAPGIVEADPDIKEGDFVIVVEETHRKPLAIGKALMEGQQMVDSESGKAIKSISHVGDKIWSFE
F

Specific function: Unknown

COG id: COG2016

COG function: function code J; Predicted RNA-binding protein (contains PUA domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PUA domain [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320844, Length=171, Percent_Identity=29.8245614035088, Blast_Score=74, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022430
- InterPro:   IPR015266
- InterPro:   IPR002478
- InterPro:   IPR015947
- InterPro:   IPR016437
- InterPro:   IPR004521 [H]

Pfam domain/function: PF01472 PUA [H]

EC number: NA

Molecular weight: Translated: 18097; Mature: 18097

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: PS50890 PUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKSRVQLRKNIKNKMLKDLESAFGKEMEDLENKTLEKVTLDEYSLILVEGRPLLFEIE
CCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHEECCCEEEEEEECCCEEEHHH
EHLFPTVRGALEMGLQKRLVVVDKGAIRFVSNGADIMAPGIVEADPDIKEGDFVIVVEET
HHHHHHHHHHHHHCHHHEEEEEECCCEEEECCCCCEECCCCCCCCCCCCCCCEEEEEECC
HRKPLAIGKALMEGQQMVDSESGKAIKSISHVGDKIWSFEF
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKVKSRVQLRKNIKNKMLKDLESAFGKEMEDLENKTLEKVTLDEYSLILVEGRPLLFEIE
CCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHEECCCEEEEEEECCCEEEHHH
EHLFPTVRGALEMGLQKRLVVVDKGAIRFVSNGADIMAPGIVEADPDIKEGDFVIVVEET
HHHHHHHHHHHHHCHHHEEEEEECCCEEEECCCCCEECCCCCCCCCCCCCCCEEEEEECC
HRKPLAIGKALMEGQQMVDSESGKAIKSISHVGDKIWSFEF
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]