| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226807
Identifier: 21226807
GI number: 21226807
Start: 850069
End: 850449
Strand: Direct
Name: 21226807
Synonym: MM_0705
Alternate gene names: NA
Gene position: 850069-850449 (Clockwise)
Preceding gene: 21226806
Following gene: 21226808
Centisome position: 20.75
GC content: 40.16
Gene sequence:
>381_bases ATGGCAAAACTTATAGACAAAATCCTTGGCGGCAATGTAAAGAGTTCGACCAGTGCCGAAGACTATACTGAAATCGATCT CAGCAAATATGAAGAGGTTCTGGAGGAAGAACCGGCAGAAACTTACGTAAAAATTGCAGAAATCTCAAGCATTAACCAGG TATCTGCACTTAAGCAGGAAGTTTATAATGGTAATATTCTCATGGTTGACATCTCAAACATAAAAGGCGATGACCTTCTG AGGGACAGGGTTTTAAAGGAGCTTAAAGACGTTGTTGTTGATGTCCACGGAGATATCGCAGGTGTTAAAGGAAACACCGT AATCGTAACTCCTACCGGCATTAAAATCGACAGATCAAAGATCATTGGTGGAAAATATTGA
Upstream 100 bases:
>100_bases GGGAACCAGTGTAGCTTTATAATAGCAAAATTAATTAATATAGATCCCAATATAGGACAGATACTATCTAAATTTAAAAA AATACAAAAGGCGTGCGTAG
Downstream 100 bases:
>100_bases GTCATAAATGTTTTAAGGATGAAAGCTTTGAGACCAGGATCTCCTGCCCCCTGTGTCAGAAAGAGCTTATAATGACATGG CAGAGAGATAATATTCCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MAKLIDKILGGNVKSSTSAEDYTEIDLSKYEEVLEEEPAETYVKIAEISSINQVSALKQEVYNGNILMVDISNIKGDDLL RDRVLKELKDVVVDVHGDIAGVKGNTVIVTPTGIKIDRSKIIGGKY
Sequences:
>Translated_126_residues MAKLIDKILGGNVKSSTSAEDYTEIDLSKYEEVLEEEPAETYVKIAEISSINQVSALKQEVYNGNILMVDISNIKGDDLL RDRVLKELKDVVVDVHGDIAGVKGNTVIVTPTGIKIDRSKIIGGKY >Mature_125_residues AKLIDKILGGNVKSSTSAEDYTEIDLSKYEEVLEEEPAETYVKIAEISSINQVSALKQEVYNGNILMVDISNIKGDDLLR DRVLKELKDVVVDVHGDIAGVKGNTVIVTPTGIKIDRSKIIGGKY
Specific function: Unknown
COG id: COG2450
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13794; Mature: 13663
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLIDKILGGNVKSSTSAEDYTEIDLSKYEEVLEEEPAETYVKIAEISSINQVSALKQE CHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHH VYNGNILMVDISNIKGDDLLRDRVLKELKDVVVDVHGDIAGVKGNTVIVTPTGIKIDRSK HHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEECCCCEEECCC IIGGKY CCCCCC >Mature Secondary Structure AKLIDKILGGNVKSSTSAEDYTEIDLSKYEEVLEEEPAETYVKIAEISSINQVSALKQE HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHH VYNGNILMVDISNIKGDDLLRDRVLKELKDVVVDVHGDIAGVKGNTVIVTPTGIKIDRSK HHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEECCCCEEECCC IIGGKY CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA