| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is yebQ [C]
Identifier: 21226805
GI number: 21226805
Start: 848096
End: 849256
Strand: Direct
Name: yebQ [C]
Synonym: MM_0703
Alternate gene names: 21226805
Gene position: 848096-849256 (Clockwise)
Preceding gene: 21226804
Following gene: 21226806
Centisome position: 20.7
GC content: 46.77
Gene sequence:
>1161_bases ATGAACTCGAAAAAACTCTTACTTTACTCTTCAGTCTTTGCAATCCAGGGCCTCTCTAACGCGGTAATTCCTATCCTTCC CGAACTTGCAGGAGAAGGCAGCACGAGCCCTGCGGTTTCAAGTTTACTTTATTCCGGATATTTTATAGGAGCCCTTCTCA CCCTTCTCCCTTTTGGAATACTTGCAGACAGGATAGGAAACCTTAAAGTGGTGAGCCTGGGAATCACACTCACCCTCATT TCCGGGATTTTTATTTCGATCTCCGACAACCTCTGGGTCCTCGGCATTTCACGCTTCGTGGAGGGTCTGGGCTGCGGGGC TTTTTTCCCTGCTGCTTATTCCATGATTGCAGACTGGAAAGACAGCCATCAGAGTCTGGGAGAATTCAATTTCCTGTTAA ATGCAGGACTGGCTGCAGGAGTATTTTTCTCAGGGATGCTTGCAGAACTGGAGATCAAGACTGCAATAAACATCTTCACC CTTCTTGCCTTCCTGTCTTTCATCTTCCTCCTTCGCGAAACCCGGGGACAAACCCCGGACAACTCCGGCAGAAAAAAGGA CGAATATGGGACTTCAAAAAGAGTTAAACCCCCGGGAGAGCCGCATGAAAACCGGACAGGCTTCAAACCCGGCATGTATC TGGAAAAAACCAGGGAGACTTTTTTTGAAAACGGATTCTGGAAACTCTGGGGAATTTCAGTCGTCCTTTACGGAGCCACA GGAGTGCTGAATTCAAACTATGCAGACTACAGTGCCGGCTTCCTGACAAAACCGGAACTTGGATTTGCAATTTCAGCATC ATATCTGGCTGCAATGTTGAGTTCACTTGCTGCAGGAAAAACAAAGGCAAAGAATAAAAGTATAATAAGAGCAGGAATAG TCCTTGCAGCAGCAGGGATCCTGTTTTCTCTAAAAGTGCCTTTACTGGCATTCTTCCTTATTGGTGCAGGAGGAGGGGCA GCAGTCCTTGGGCTTGTTGCTGCAGTCTCCAGAGTGAGCTCGAGCGGGATCGCGATGGGATTATTCAATACAGGAATTTA TGCAGGTCTCGGGCTTATTCCAGTATTTGGAAGTTTGTTTATAGGACCTTTAGGCTATGAAAGCGTGTTTCTTGGAAGTG GCCTGGTGCTTCTCACGACGCTTTTTGTTAAATTTGAATAA
Upstream 100 bases:
>100_bases ATATGCATCAGAGCGCTTCCAGGGCATCCCCGGTATTATCAGTTTCCTGAAGGCAATTACAGAAATTAATTACTGATCAA ATGCGAATAACAGAAAAACC
Downstream 100 bases:
>100_bases AACATTTATAAACAAAATCCGGAAATAATTAATAAAAATGTACAGGAAATTGAACATCTGAGTCCGATAATATCTGAGTT TCCACATAAGCTTTAAAAGG
Product: permease
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Permease; Multidrug Efflux Protein; Sugar Transport Family Protein
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MNSKKLLLYSSVFAIQGLSNAVIPILPELAGEGSTSPAVSSLLYSGYFIGALLTLLPFGILADRIGNLKVVSLGITLTLI SGIFISISDNLWVLGISRFVEGLGCGAFFPAAYSMIADWKDSHQSLGEFNFLLNAGLAAGVFFSGMLAELEIKTAINIFT LLAFLSFIFLLRETRGQTPDNSGRKKDEYGTSKRVKPPGEPHENRTGFKPGMYLEKTRETFFENGFWKLWGISVVLYGAT GVLNSNYADYSAGFLTKPELGFAISASYLAAMLSSLAAGKTKAKNKSIIRAGIVLAAAGILFSLKVPLLAFFLIGAGGGA AVLGLVAAVSRVSSSGIAMGLFNTGIYAGLGLIPVFGSLFIGPLGYESVFLGSGLVLLTTLFVKFE
Sequences:
>Translated_386_residues MNSKKLLLYSSVFAIQGLSNAVIPILPELAGEGSTSPAVSSLLYSGYFIGALLTLLPFGILADRIGNLKVVSLGITLTLI SGIFISISDNLWVLGISRFVEGLGCGAFFPAAYSMIADWKDSHQSLGEFNFLLNAGLAAGVFFSGMLAELEIKTAINIFT LLAFLSFIFLLRETRGQTPDNSGRKKDEYGTSKRVKPPGEPHENRTGFKPGMYLEKTRETFFENGFWKLWGISVVLYGAT GVLNSNYADYSAGFLTKPELGFAISASYLAAMLSSLAAGKTKAKNKSIIRAGIVLAAAGILFSLKVPLLAFFLIGAGGGA AVLGLVAAVSRVSSSGIAMGLFNTGIYAGLGLIPVFGSLFIGPLGYESVFLGSGLVLLTTLFVKFE >Mature_386_residues MNSKKLLLYSSVFAIQGLSNAVIPILPELAGEGSTSPAVSSLLYSGYFIGALLTLLPFGILADRIGNLKVVSLGITLTLI SGIFISISDNLWVLGISRFVEGLGCGAFFPAAYSMIADWKDSHQSLGEFNFLLNAGLAAGVFFSGMLAELEIKTAINIFT LLAFLSFIFLLRETRGQTPDNSGRKKDEYGTSKRVKPPGEPHENRTGFKPGMYLEKTRETFFENGFWKLWGISVVLYGAT GVLNSNYADYSAGFLTKPELGFAISASYLAAMLSSLAAGKTKAKNKSIIRAGIVLAAAGILFSLKVPLLAFFLIGAGGGA AVLGLVAAVSRVSSSGIAMGLFNTGIYAGLGLIPVFGSLFIGPLGYESVFLGSGLVLLTTLFVKFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral membrane protein. Inner membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40848; Mature: 40848
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSKKLLLYSSVFAIQGLSNAVIPILPELAGEGSTSPAVSSLLYSGYFIGALLTLLPFGI CCCCEEEEEHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LADRIGNLKVVSLGITLTLISGIFISISDNLWVLGISRFVEGLGCGAFFPAAYSMIADWK HHHHCCCEEEEEEHHHHHHHHCEEEEECCCEEEEEHHHHHHHCCCCHHHHHHHHHHHHHH DSHQSLGEFNFLLNAGLAAGVFFSGMLAELEIKTAINIFTLLAFLSFIFLLRETRGQTPD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NSGRKKDEYGTSKRVKPPGEPHENRTGFKPGMYLEKTRETFFENGFWKLWGISVVLYGAT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEHHHHEEEEEECC GVLNSNYADYSAGFLTKPELGFAISASYLAAMLSSLAAGKTKAKNKSIIRAGIVLAAAGI CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHH LFSLKVPLLAFFLIGAGGGAAVLGLVAAVSRVSSSGIAMGLFNTGIYAGLGLIPVFGSLF HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHH IGPLGYESVFLGSGLVLLTTLFVKFE HCCCCCHHHHHCCCHHHHHHHHHHCC >Mature Secondary Structure MNSKKLLLYSSVFAIQGLSNAVIPILPELAGEGSTSPAVSSLLYSGYFIGALLTLLPFGI CCCCEEEEEHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LADRIGNLKVVSLGITLTLISGIFISISDNLWVLGISRFVEGLGCGAFFPAAYSMIADWK HHHHCCCEEEEEEHHHHHHHHCEEEEECCCEEEEEHHHHHHHCCCCHHHHHHHHHHHHHH DSHQSLGEFNFLLNAGLAAGVFFSGMLAELEIKTAINIFTLLAFLSFIFLLRETRGQTPD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NSGRKKDEYGTSKRVKPPGEPHENRTGFKPGMYLEKTRETFFENGFWKLWGISVVLYGAT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEHHHHEEEEEECC GVLNSNYADYSAGFLTKPELGFAISASYLAAMLSSLAAGKTKAKNKSIIRAGIVLAAAGI CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHH LFSLKVPLLAFFLIGAGGGAAVLGLVAAVSRVSSSGIAMGLFNTGIYAGLGLIPVFGSLF HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHH IGPLGYESVFLGSGLVLLTTLFVKFE HCCCCCHHHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA