Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is yebQ [C]

Identifier: 21226805

GI number: 21226805

Start: 848096

End: 849256

Strand: Direct

Name: yebQ [C]

Synonym: MM_0703

Alternate gene names: 21226805

Gene position: 848096-849256 (Clockwise)

Preceding gene: 21226804

Following gene: 21226806

Centisome position: 20.7

GC content: 46.77

Gene sequence:

>1161_bases
ATGAACTCGAAAAAACTCTTACTTTACTCTTCAGTCTTTGCAATCCAGGGCCTCTCTAACGCGGTAATTCCTATCCTTCC
CGAACTTGCAGGAGAAGGCAGCACGAGCCCTGCGGTTTCAAGTTTACTTTATTCCGGATATTTTATAGGAGCCCTTCTCA
CCCTTCTCCCTTTTGGAATACTTGCAGACAGGATAGGAAACCTTAAAGTGGTGAGCCTGGGAATCACACTCACCCTCATT
TCCGGGATTTTTATTTCGATCTCCGACAACCTCTGGGTCCTCGGCATTTCACGCTTCGTGGAGGGTCTGGGCTGCGGGGC
TTTTTTCCCTGCTGCTTATTCCATGATTGCAGACTGGAAAGACAGCCATCAGAGTCTGGGAGAATTCAATTTCCTGTTAA
ATGCAGGACTGGCTGCAGGAGTATTTTTCTCAGGGATGCTTGCAGAACTGGAGATCAAGACTGCAATAAACATCTTCACC
CTTCTTGCCTTCCTGTCTTTCATCTTCCTCCTTCGCGAAACCCGGGGACAAACCCCGGACAACTCCGGCAGAAAAAAGGA
CGAATATGGGACTTCAAAAAGAGTTAAACCCCCGGGAGAGCCGCATGAAAACCGGACAGGCTTCAAACCCGGCATGTATC
TGGAAAAAACCAGGGAGACTTTTTTTGAAAACGGATTCTGGAAACTCTGGGGAATTTCAGTCGTCCTTTACGGAGCCACA
GGAGTGCTGAATTCAAACTATGCAGACTACAGTGCCGGCTTCCTGACAAAACCGGAACTTGGATTTGCAATTTCAGCATC
ATATCTGGCTGCAATGTTGAGTTCACTTGCTGCAGGAAAAACAAAGGCAAAGAATAAAAGTATAATAAGAGCAGGAATAG
TCCTTGCAGCAGCAGGGATCCTGTTTTCTCTAAAAGTGCCTTTACTGGCATTCTTCCTTATTGGTGCAGGAGGAGGGGCA
GCAGTCCTTGGGCTTGTTGCTGCAGTCTCCAGAGTGAGCTCGAGCGGGATCGCGATGGGATTATTCAATACAGGAATTTA
TGCAGGTCTCGGGCTTATTCCAGTATTTGGAAGTTTGTTTATAGGACCTTTAGGCTATGAAAGCGTGTTTCTTGGAAGTG
GCCTGGTGCTTCTCACGACGCTTTTTGTTAAATTTGAATAA

Upstream 100 bases:

>100_bases
ATATGCATCAGAGCGCTTCCAGGGCATCCCCGGTATTATCAGTTTCCTGAAGGCAATTACAGAAATTAATTACTGATCAA
ATGCGAATAACAGAAAAACC

Downstream 100 bases:

>100_bases
AACATTTATAAACAAAATCCGGAAATAATTAATAAAAATGTACAGGAAATTGAACATCTGAGTCCGATAATATCTGAGTT
TCCACATAAGCTTTAAAAGG

Product: permease

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Permease; Multidrug Efflux Protein; Sugar Transport Family Protein

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MNSKKLLLYSSVFAIQGLSNAVIPILPELAGEGSTSPAVSSLLYSGYFIGALLTLLPFGILADRIGNLKVVSLGITLTLI
SGIFISISDNLWVLGISRFVEGLGCGAFFPAAYSMIADWKDSHQSLGEFNFLLNAGLAAGVFFSGMLAELEIKTAINIFT
LLAFLSFIFLLRETRGQTPDNSGRKKDEYGTSKRVKPPGEPHENRTGFKPGMYLEKTRETFFENGFWKLWGISVVLYGAT
GVLNSNYADYSAGFLTKPELGFAISASYLAAMLSSLAAGKTKAKNKSIIRAGIVLAAAGILFSLKVPLLAFFLIGAGGGA
AVLGLVAAVSRVSSSGIAMGLFNTGIYAGLGLIPVFGSLFIGPLGYESVFLGSGLVLLTTLFVKFE

Sequences:

>Translated_386_residues
MNSKKLLLYSSVFAIQGLSNAVIPILPELAGEGSTSPAVSSLLYSGYFIGALLTLLPFGILADRIGNLKVVSLGITLTLI
SGIFISISDNLWVLGISRFVEGLGCGAFFPAAYSMIADWKDSHQSLGEFNFLLNAGLAAGVFFSGMLAELEIKTAINIFT
LLAFLSFIFLLRETRGQTPDNSGRKKDEYGTSKRVKPPGEPHENRTGFKPGMYLEKTRETFFENGFWKLWGISVVLYGAT
GVLNSNYADYSAGFLTKPELGFAISASYLAAMLSSLAAGKTKAKNKSIIRAGIVLAAAGILFSLKVPLLAFFLIGAGGGA
AVLGLVAAVSRVSSSGIAMGLFNTGIYAGLGLIPVFGSLFIGPLGYESVFLGSGLVLLTTLFVKFE
>Mature_386_residues
MNSKKLLLYSSVFAIQGLSNAVIPILPELAGEGSTSPAVSSLLYSGYFIGALLTLLPFGILADRIGNLKVVSLGITLTLI
SGIFISISDNLWVLGISRFVEGLGCGAFFPAAYSMIADWKDSHQSLGEFNFLLNAGLAAGVFFSGMLAELEIKTAINIFT
LLAFLSFIFLLRETRGQTPDNSGRKKDEYGTSKRVKPPGEPHENRTGFKPGMYLEKTRETFFENGFWKLWGISVVLYGAT
GVLNSNYADYSAGFLTKPELGFAISASYLAAMLSSLAAGKTKAKNKSIIRAGIVLAAAGILFSLKVPLLAFFLIGAGGGA
AVLGLVAAVSRVSSSGIAMGLFNTGIYAGLGLIPVFGSLFIGPLGYESVFLGSGLVLLTTLFVKFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral membrane protein. Inner membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40848; Mature: 40848

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSKKLLLYSSVFAIQGLSNAVIPILPELAGEGSTSPAVSSLLYSGYFIGALLTLLPFGI
CCCCEEEEEHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LADRIGNLKVVSLGITLTLISGIFISISDNLWVLGISRFVEGLGCGAFFPAAYSMIADWK
HHHHCCCEEEEEEHHHHHHHHCEEEEECCCEEEEEHHHHHHHCCCCHHHHHHHHHHHHHH
DSHQSLGEFNFLLNAGLAAGVFFSGMLAELEIKTAINIFTLLAFLSFIFLLRETRGQTPD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NSGRKKDEYGTSKRVKPPGEPHENRTGFKPGMYLEKTRETFFENGFWKLWGISVVLYGAT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEHHHHEEEEEECC
GVLNSNYADYSAGFLTKPELGFAISASYLAAMLSSLAAGKTKAKNKSIIRAGIVLAAAGI
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHH
LFSLKVPLLAFFLIGAGGGAAVLGLVAAVSRVSSSGIAMGLFNTGIYAGLGLIPVFGSLF
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHH
IGPLGYESVFLGSGLVLLTTLFVKFE
HCCCCCHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MNSKKLLLYSSVFAIQGLSNAVIPILPELAGEGSTSPAVSSLLYSGYFIGALLTLLPFGI
CCCCEEEEEHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LADRIGNLKVVSLGITLTLISGIFISISDNLWVLGISRFVEGLGCGAFFPAAYSMIADWK
HHHHCCCEEEEEEHHHHHHHHCEEEEECCCEEEEEHHHHHHHCCCCHHHHHHHHHHHHHH
DSHQSLGEFNFLLNAGLAAGVFFSGMLAELEIKTAINIFTLLAFLSFIFLLRETRGQTPD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NSGRKKDEYGTSKRVKPPGEPHENRTGFKPGMYLEKTRETFFENGFWKLWGISVVLYGAT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEHHHHEEEEEECC
GVLNSNYADYSAGFLTKPELGFAISASYLAAMLSSLAAGKTKAKNKSIIRAGIVLAAAGI
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHH
LFSLKVPLLAFFLIGAGGGAAVLGLVAAVSRVSSSGIAMGLFNTGIYAGLGLIPVFGSLF
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHH
IGPLGYESVFLGSGLVLLTTLFVKFE
HCCCCCHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA