| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226793
Identifier: 21226793
GI number: 21226793
Start: 829810
End: 831009
Strand: Direct
Name: 21226793
Synonym: MM_0691
Alternate gene names: NA
Gene position: 829810-831009 (Clockwise)
Preceding gene: 21226792
Following gene: 21226794
Centisome position: 20.26
GC content: 48.83
Gene sequence:
>1200_bases ATGCAGAATATCCTTGCAATTGGCTTTGACACGCGAAACATTGTCTGCTCCGCAAGCAGGGCAGGCTATACTGTCTGCTC CATAGATGCATTCCGTGACCTTGACCTTCAGGAATGTGCATATGCATCAGCTCTTCTCGAATGCAGGACTTCAGGCGAAC TCCGCCAGCTTGACCCTGGATGGATAGTAGCTAAAATGAATGGTTTCGGGCTTGACTTTGATGCCATCGTGCCTGGCTCG GGGATGGAGATGCTGGACCCGTCTCGTTTTCCCTGCCCCGTGCTTGCCAGCAGCCCTGAAGCAGTGAAGGAAGCTTCAAA CAAGCTTCACCTTGCAAAAAGGCTTGAAGCTATGGGAATGCCACATCCTCGCTGTTATTCTTCCAACGAGCCGGAAGCAA TCGAATATCCTGTTATTCTCAAACCGGCTACAGGAGGAGGAGGGATATTCAACAGGGTTGCAAATAACAGACAGGAAATG CTGGAAGTGCTGGAAGAATTATCCGGTCCTGACCAGGGCCTTACGGAAAATGAAATCGTGATTCAGCAGTTTCTGGAAGG AACCCCTTCAAGCGTCTCTGTGCTTTCTACAAAGGATGAAGCCCTGGCAGTTGCTGTGAACGAGCAATTAACAGGCATAC CCTGGCTTTCAAGGCTGCCGTTTGCCTACTGCGGAAATATAACCCCTTTCATAACAGAGTACGCAGAAGAGATGGAAAAA CTTGCAGAAGAACTGATACTTGAACTCGGGCTCCTCGGGTCATGTGGAGTTGATTTTCTGGTCACAGAACAGGGGCCTGT GGTGCTTGAAGTAAATCCCAGGTTCCAGGGAAGCCTGGACACGGTTGAGAAAGCGATGGGAATTAACCTTTTCGAAGCTC ATGCCGGTTGTTTCAGGGGAGAACTTCCTGAAAAACCGAAAGCAAAACTATTTGCAGCAAGAGGAGTTCTTTATTCGGAT CGAGAGCTTTTTATAGACAGAAAACTCATGGAAGTCATTCTCAGGGAAAAAAGCGCGGACATTCCGCCTCAGAAAACTGT TATCGAGCCTGATTGGCCTCTGACCTCCCTGTTTGAATTCGCCTCAACAAGAGAAGAGGCAATCAAATCTCTCGAGGGAG GGGCAGAGCGGATAAAGACTTTTATTGCAGAACGAATTACAGGAAAAGCAGAGTCCCTGAGTCCTGCCGGAGAAGCATGA
Upstream 100 bases:
>100_bases AGGCGGGAAGCGAGATTCCTGTCCTGAAAACAGAATATGGAATCTTTGCACTGGCACACACCGATATTCCGCAGGAAAAA TAAAAGTTTAACGAGGAAAT
Downstream 100 bases:
>100_bases GGTTCAGCTGCTGAGATTGCAGTTTTTTCCGGACATGGAATCTTTTAAATAAAAATTTTAATGTAAGCTTTAATAATGGT ATGTTCAATTCATATAAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MQNILAIGFDTRNIVCSASRAGYTVCSIDAFRDLDLQECAYASALLECRTSGELRQLDPGWIVAKMNGFGLDFDAIVPGS GMEMLDPSRFPCPVLASSPEAVKEASNKLHLAKRLEAMGMPHPRCYSSNEPEAIEYPVILKPATGGGGIFNRVANNRQEM LEVLEELSGPDQGLTENEIVIQQFLEGTPSSVSVLSTKDEALAVAVNEQLTGIPWLSRLPFAYCGNITPFITEYAEEMEK LAEELILELGLLGSCGVDFLVTEQGPVVLEVNPRFQGSLDTVEKAMGINLFEAHAGCFRGELPEKPKAKLFAARGVLYSD RELFIDRKLMEVILREKSADIPPQKTVIEPDWPLTSLFEFASTREEAIKSLEGGAERIKTFIAERITGKAESLSPAGEA
Sequences:
>Translated_399_residues MQNILAIGFDTRNIVCSASRAGYTVCSIDAFRDLDLQECAYASALLECRTSGELRQLDPGWIVAKMNGFGLDFDAIVPGS GMEMLDPSRFPCPVLASSPEAVKEASNKLHLAKRLEAMGMPHPRCYSSNEPEAIEYPVILKPATGGGGIFNRVANNRQEM LEVLEELSGPDQGLTENEIVIQQFLEGTPSSVSVLSTKDEALAVAVNEQLTGIPWLSRLPFAYCGNITPFITEYAEEMEK LAEELILELGLLGSCGVDFLVTEQGPVVLEVNPRFQGSLDTVEKAMGINLFEAHAGCFRGELPEKPKAKLFAARGVLYSD RELFIDRKLMEVILREKSADIPPQKTVIEPDWPLTSLFEFASTREEAIKSLEGGAERIKTFIAERITGKAESLSPAGEA >Mature_399_residues MQNILAIGFDTRNIVCSASRAGYTVCSIDAFRDLDLQECAYASALLECRTSGELRQLDPGWIVAKMNGFGLDFDAIVPGS GMEMLDPSRFPCPVLASSPEAVKEASNKLHLAKRLEAMGMPHPRCYSSNEPEAIEYPVILKPATGGGGIFNRVANNRQEM LEVLEELSGPDQGLTENEIVIQQFLEGTPSSVSVLSTKDEALAVAVNEQLTGIPWLSRLPFAYCGNITPFITEYAEEMEK LAEELILELGLLGSCGVDFLVTEQGPVVLEVNPRFQGSLDTVEKAMGINLFEAHAGCFRGELPEKPKAKLFAARGVLYSD RELFIDRKLMEVILREKSADIPPQKTVIEPDWPLTSLFEFASTREEAIKSLEGGAERIKTFIAERITGKAESLSPAGEA
Specific function: Unknown
COG id: COG2232
COG function: function code R; Predicted ATP-dependent carboligase related to biotin carboxylase
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR003806 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR016677 [H]
Pfam domain/function: PF02655 ATP-grasp_3 [H]
EC number: NA
Molecular weight: Translated: 43609; Mature: 43609
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNILAIGFDTRNIVCSASRAGYTVCSIDAFRDLDLQECAYASALLECRTSGELRQLDPG CCCEEEEECCCCCEEEECCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHCCCCCEECCCC WIVAKMNGFGLDFDAIVPGSGMEMLDPSRFPCPVLASSPEAVKEASNKLHLAKRLEAMGM EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC PHPRCYSSNEPEAIEYPVILKPATGGGGIFNRVANNRQEMLEVLEELSGPDQGLTENEIV CCCCCCCCCCCCEEECCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHH IQQFLEGTPSSVSVLSTKDEALAVAVNEQLTGIPWLSRLPFAYCGNITPFITEYAEEMEK HHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCCHHHHCCHHHHCCCCHHHHHHHHHHHH LAEELILELGLLGSCGVDFLVTEQGPVVLEVNPRFQGSLDTVEKAMGINLFEAHAGCFRG HHHHHHHHHCCCCCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHCCCHHHHHCCHHCC ELPEKPKAKLFAARGVLYSDRELFIDRKLMEVILREKSADIPPQKTVIEPDWPLTSLFEF CCCCCCHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHH ASTREEAIKSLEGGAERIKTFIAERITGKAESLSPAGEA HHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHCCCCCCCC >Mature Secondary Structure MQNILAIGFDTRNIVCSASRAGYTVCSIDAFRDLDLQECAYASALLECRTSGELRQLDPG CCCEEEEECCCCCEEEECCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHCCCCCEECCCC WIVAKMNGFGLDFDAIVPGSGMEMLDPSRFPCPVLASSPEAVKEASNKLHLAKRLEAMGM EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC PHPRCYSSNEPEAIEYPVILKPATGGGGIFNRVANNRQEMLEVLEELSGPDQGLTENEIV CCCCCCCCCCCCEEECCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHH IQQFLEGTPSSVSVLSTKDEALAVAVNEQLTGIPWLSRLPFAYCGNITPFITEYAEEMEK HHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCCHHHHCCHHHHCCCCHHHHHHHHHHHH LAEELILELGLLGSCGVDFLVTEQGPVVLEVNPRFQGSLDTVEKAMGINLFEAHAGCFRG HHHHHHHHHCCCCCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHCCCHHHHHCCHHCC ELPEKPKAKLFAARGVLYSDRELFIDRKLMEVILREKSADIPPQKTVIEPDWPLTSLFEF CCCCCCHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHH ASTREEAIKSLEGGAERIKTFIAERITGKAESLSPAGEA HHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]