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The map label for this gene is 21226792

Identifier: 21226792

GI number: 21226792

Start: 828728

End: 829792

Strand: Direct

Name: 21226792

Synonym: MM_0690

Alternate gene names: NA

Gene position: 828728-829792 (Clockwise)

Preceding gene: 21226791

Following gene: 21226793

Centisome position: 20.23

GC content: 46.67

Gene sequence:

>1065_bases
ATGAATTCCATTACATGCCCGAAATGTGGCACAGAATGCGACAAACTTTTTGATTCCGTTTGCAGGGACTGTTTCTTTGA
AACTTTCAAACTGATTGATCTGCCTCTCGTACTTCATGTAAAGATCTGTTCCAGCTGCGGAGCATATTTCCACAGGAGCC
GCTGGGAAAACATCGGCAATCTGGAGGAAGTGGTGCTGAAAGCCGTAGAAAACGCCCTTTTCATCCACGATGAAGCAGGA
GATGTGGAACTCTACCTTGAGCCGAAGGAAATTACTCCATATATATACATGGTGAGAGCCGAGGTAGATGCAATTGTAAG
GGGAGAACCGGTCCATGCCGAGGCTGCAACCGAAGTAAGGGTTCAGAGGATAGCCTGCGACATGTGCAGCCGTGAATCCG
GAGGTTATTTTGAAGCAATTATCCAGATAAGGGCAGCAGGCAGGTTTCCGACAGAAGAGGAAAAAAGGCGCTGCTCCGCC
ATAGCCAGAGAAGCTATGGAAAGCATGAAAAAAAAGGGAGATCGGCTGGCATTTATAAGTGACTACCAGGAACAGAAAGA
AGGCATCGATCTTTACATGGGTTCCATGAATGCGAGCAGGCAGGTTTGCCGTATGATTATCTCTGAACTGGGGGGCAGTT
TTGCTGAATCTCCTACGCTCGTAGGTATGAAAGACGGAAAAAACCTTTACAGGATTACTTTTGCCATGCGCCTTCCTGAG
TTCCGACCAGGCGATGTGATAAGGTTCAGAGGAAGAATCATTCAGATCAGAAGTTCAGGCAAGAAAGTAAACGGGATAAG
CCTTGAAGACGGTTCCCGGTTTCTATCAACTCCTGAAGAACTGAAGGGCGCAGAAAAGATTGCAAACATTGGAGATGCGG
TACTTACGGTTCTGGTCTCAATCGAAGAAAATGCAATTCTTGTCCTTGACCCTGAGACCTATGAAACCGTCGCGATAAAA
AAGCCCATGTTCTTTAACGCAGAGGCGGGAAGCGAGATTCCTGTCCTGAAAACAGAATATGGAATCTTTGCACTGGCACA
CACCGATATTCCGCAGGAAAAATAA

Upstream 100 bases:

>100_bases
AAGTGTGCTTAACAAATGAACTGCCCAATGTTACTGAAAACATATTTTGAATACTTTTTAAAGCTATTACTCCAAGAAGA
CTGAAGAATAAGGATTATAG

Downstream 100 bases:

>100_bases
AAGTTTAACGAGGAAATATGCAGAATATCCTTGCAATTGGCTTTGACACGCGAAACATTGTCTGCTCCGCAAGCAGGGCA
GGCTATACTGTCTGCTCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MNSITCPKCGTECDKLFDSVCRDCFFETFKLIDLPLVLHVKICSSCGAYFHRSRWENIGNLEEVVLKAVENALFIHDEAG
DVELYLEPKEITPYIYMVRAEVDAIVRGEPVHAEAATEVRVQRIACDMCSRESGGYFEAIIQIRAAGRFPTEEEKRRCSA
IAREAMESMKKKGDRLAFISDYQEQKEGIDLYMGSMNASRQVCRMIISELGGSFAESPTLVGMKDGKNLYRITFAMRLPE
FRPGDVIRFRGRIIQIRSSGKKVNGISLEDGSRFLSTPEELKGAEKIANIGDAVLTVLVSIEENAILVLDPETYETVAIK
KPMFFNAEAGSEIPVLKTEYGIFALAHTDIPQEK

Sequences:

>Translated_354_residues
MNSITCPKCGTECDKLFDSVCRDCFFETFKLIDLPLVLHVKICSSCGAYFHRSRWENIGNLEEVVLKAVENALFIHDEAG
DVELYLEPKEITPYIYMVRAEVDAIVRGEPVHAEAATEVRVQRIACDMCSRESGGYFEAIIQIRAAGRFPTEEEKRRCSA
IAREAMESMKKKGDRLAFISDYQEQKEGIDLYMGSMNASRQVCRMIISELGGSFAESPTLVGMKDGKNLYRITFAMRLPE
FRPGDVIRFRGRIIQIRSSGKKVNGISLEDGSRFLSTPEELKGAEKIANIGDAVLTVLVSIEENAILVLDPETYETVAIK
KPMFFNAEAGSEIPVLKTEYGIFALAHTDIPQEK
>Mature_354_residues
MNSITCPKCGTECDKLFDSVCRDCFFETFKLIDLPLVLHVKICSSCGAYFHRSRWENIGNLEEVVLKAVENALFIHDEAG
DVELYLEPKEITPYIYMVRAEVDAIVRGEPVHAEAATEVRVQRIACDMCSRESGGYFEAIIQIRAAGRFPTEEEKRRCSA
IAREAMESMKKKGDRLAFISDYQEQKEGIDLYMGSMNASRQVCRMIISELGGSFAESPTLVGMKDGKNLYRITFAMRLPE
FRPGDVIRFRGRIIQIRSSGKKVNGISLEDGSRFLSTPEELKGAEKIANIGDAVLTVLVSIEENAILVLDPETYETVAIK
KPMFFNAEAGSEIPVLKTEYGIFALAHTDIPQEK

Specific function: Unknown

COG id: COG1499

COG function: function code J; NMD protein affecting ribosome stability and mRNA decay

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007064 [H]

Pfam domain/function: PF04981 NMD3 [H]

EC number: NA

Molecular weight: Translated: 39681; Mature: 39681

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSITCPKCGTECDKLFDSVCRDCFFETFKLIDLPLVLHVKICSSCGAYFHRSRWENIGN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
LEEVVLKAVENALFIHDEAGDVELYLEPKEITPYIYMVRAEVDAIVRGEPVHAEAATEVR
HHHHHHHHHHHHEEEEECCCCEEEEEECCCCCCEEEEEEEHHHHHCCCCCCCCHHHHHHH
VQRIACDMCSRESGGYFEAIIQIRAAGRFPTEEEKRRCSAIAREAMESMKKKGDRLAFIS
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEH
DYQEQKEGIDLYMGSMNASRQVCRMIISELGGSFAESPTLVGMKDGKNLYRITFAMRLPE
HHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEEEECCC
FRPGDVIRFRGRIIQIRSSGKKVNGISLEDGSRFLSTPEELKGAEKIANIGDAVLTVLVS
CCCCCEEEECCEEEEEECCCCEECCEECCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHEE
IEENAILVLDPETYETVAIKKPMFFNAEAGSEIPVLKTEYGIFALAHTDIPQEK
ECCCEEEEECCCCCEEEEECCCEEECCCCCCCCCEEEECCCEEEEEECCCCCCC
>Mature Secondary Structure
MNSITCPKCGTECDKLFDSVCRDCFFETFKLIDLPLVLHVKICSSCGAYFHRSRWENIGN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
LEEVVLKAVENALFIHDEAGDVELYLEPKEITPYIYMVRAEVDAIVRGEPVHAEAATEVR
HHHHHHHHHHHHEEEEECCCCEEEEEECCCCCCEEEEEEEHHHHHCCCCCCCCHHHHHHH
VQRIACDMCSRESGGYFEAIIQIRAAGRFPTEEEKRRCSAIAREAMESMKKKGDRLAFIS
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEH
DYQEQKEGIDLYMGSMNASRQVCRMIISELGGSFAESPTLVGMKDGKNLYRITFAMRLPE
HHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEEEECCC
FRPGDVIRFRGRIIQIRSSGKKVNGISLEDGSRFLSTPEELKGAEKIANIGDAVLTVLVS
CCCCCEEEECCEEEEEECCCCEECCEECCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHEE
IEENAILVLDPETYETVAIKKPMFFNAEAGSEIPVLKTEYGIFALAHTDIPQEK
ECCCEEEEECCCCCEEEEECCCEEECCCCCCCCCEEEECCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]