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The map label for this gene is pfdB [H]

Identifier: 21226776

GI number: 21226776

Start: 810703

End: 811056

Strand: Direct

Name: pfdB [H]

Synonym: MM_0674

Alternate gene names: 21226776

Gene position: 810703-811056 (Clockwise)

Preceding gene: 21226768

Following gene: 21226777

Centisome position: 19.79

GC content: 45.76

Gene sequence:

>354_bases
ATGACTTCAGAATTACCTCCTCAAATCCAGAACCAGATAGCACAGCTTCAGCAGGTACAGCAGCAAGTTCAGGCTCTGTC
CATGCAAAAATCTCAGATTGAAGCTATGCAAAAAGAGTCAAAAATGGCTCTTGAGGAATTGGAAAGACTGGCTGACGATG
CGGTTATTTACCGCAGTGTCGGAGAGCTGGTTATAAAAACAACTAAAGAGGAGTCCGTTTCAAAACTTAAAGACAGAGAA
GAAACCCTCTCTCTCAGGCTTCAGTCTATCTCCAGGCAGGAAGAAAGACTTACTGCCCGCTTCAAACAGCTTCAGGAGCA
GATCCAGCAGGCTCTTGGGCCCAGAGCACAATAA

Upstream 100 bases:

>100_bases
TGTTTTTAATCCGATTCTGTGGAGGAGGGAATTTTCGGAAGCTGCAGGACAGAAACATTAAAATCCCTTCAGGTTTATTG
TGGACTCAGGTGAAAATTAC

Downstream 100 bases:

>100_bases
TTTTAATTTTCGTCTACACATATAGAATACGGAAAAGGACTATATCTGTAATGGAGATTGTGCCGAAATCCCGCGTTTCC
GGGATTTTCGAAACCCATAC

Product: prefoldin subunit beta

Products: NA

Alternate protein names: GimC subunit beta [H]

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MTSELPPQIQNQIAQLQQVQQQVQALSMQKSQIEAMQKESKMALEELERLADDAVIYRSVGELVIKTTKEESVSKLKDRE
ETLSLRLQSISRQEERLTARFKQLQEQIQQALGPRAQ

Sequences:

>Translated_117_residues
MTSELPPQIQNQIAQLQQVQQQVQALSMQKSQIEAMQKESKMALEELERLADDAVIYRSVGELVIKTTKEESVSKLKDRE
ETLSLRLQSISRQEERLTARFKQLQEQIQQALGPRAQ
>Mature_116_residues
TSELPPQIQNQIAQLQQVQQQVQALSMQKSQIEAMQKESKMALEELERLADDAVIYRSVGELVIKTTKEESVSKLKDREE
TLSLRLQSISRQEERLTARFKQLQEQIQQALGPRAQ

Specific function: Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding [H]

COG id: COG1382

COG function: function code O; Prefoldin, chaperonin cofactor

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prefoldin subunit beta family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012713
- InterPro:   IPR002777
- InterPro:   IPR009053 [H]

Pfam domain/function: PF01920 Prefoldin_2 [H]

EC number: NA

Molecular weight: Translated: 13479; Mature: 13347

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSELPPQIQNQIAQLQQVQQQVQALSMQKSQIEAMQKESKMALEELERLADDAVIYRSV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GELVIKTTKEESVSKLKDREETLSLRLQSISRQEERLTARFKQLQEQIQQALGPRAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TSELPPQIQNQIAQLQQVQQQVQALSMQKSQIEAMQKESKMALEELERLADDAVIYRSV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GELVIKTTKEESVSKLKDREETLSLRLQSISRQEERLTARFKQLQEQIQQALGPRAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]