| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226777
Identifier: 21226777
GI number: 21226777
Start: 811179
End: 812183
Strand: Direct
Name: 21226777
Synonym: MM_0675
Alternate gene names: NA
Gene position: 811179-812183 (Clockwise)
Preceding gene: 21226776
Following gene: 21226778
Centisome position: 19.8
GC content: 46.47
Gene sequence:
>1005_bases ATGCGAGTTGATGAAGCGGAGTTTTTTAACCGGCTCCTTGACTATCGAAACATTTTATATTTGTGTCACAGGAATGCAGA TCCGGATGCCGTTAGCAGTGCTTTCGCTCTTTCTGAAGCTATAGGAGGAACAGTCGGACTGGTGGATGGGTGTAACCGTG TAGCATCTGTCCTGATCGACAGGCTCGGAATCGAGGTAGTGGATAAGCCAGACCCTGCAAATTATGGTTTTGTTGTCGTG GTCGATACCTCGACAAAAGCACAGCTAAATGATATAGAGCTGACCAGTTATTGCGTAATTGACCATCATACCACTACTGC CCTCACAGAAAACGCAGAATTTTTCCTGCACAGGAATACAACTTCCACTGTAGAGATAGTCTACGATATCCTGAAAGCAA TGGGAGCTCCGATTAACCGCAGGATGGGAATTGGCATGCTCACAGGAATAGTAACTGATACAGGGCATTTTAAGCATGCT TCAGCCGATACTTTCAAAACTGTGGCGAAAATTATTGAGGCAAGTGGGGTAGAGTATGGAGAAGTCCTTGACCTTATGGC TGCTACACCCCAGGACATCTCAATGCGCATAGCTATCCTGAAAGCTGCAAGCAGGGTTGAACTCGACAGAGTAGGAGATA TGATCATAGCTTCTTCTCATGTGAGTTCTTTCGGAGGCTCTGCATCTTCCATGCTCATTAACATCGGGGCTGATGTGGCT TTTGTGGGCACGACGAAAGGAGAAAGTGTCAGAGTGAGCGCAAGGGCAAAACGCGACGCTGTAAATGCGGGAGTCAATCT CGGCCAGCTGATGGAAGATATTAGCAATGAATATAACGGCACCGGAGGCGGACATTCAGGAGCTGCGGGAATAGATATAA TTGCCAATATGGATGAAGTACTCCATAAATGCAGGGAGATGACAAAGAAAATCCTTGAGAACTGCCTCGGAACCACGGCA AAAGAGATTTCCGAGGAAGAAATCGAAGTCAATGAGGACGAATAA
Upstream 100 bases:
>100_bases TAGAATACGGAAAAGGACTATATCTGTAATGGAGATTGTGCCGAAATCCCGCGTTTCCGGGATTTTCGAAACCCATACAA AACGGTAGCCAGAGAGGACA
Downstream 100 bases:
>100_bases ATTGATAAAGCAGATAACTGGCAAATAATAACAGTGAACAAGCAATAGCAAAAGATGGTAAAATAACTTCAACTTTTTAT CCTGTCTAAAAATTATTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MRVDEAEFFNRLLDYRNILYLCHRNADPDAVSSAFALSEAIGGTVGLVDGCNRVASVLIDRLGIEVVDKPDPANYGFVVV VDTSTKAQLNDIELTSYCVIDHHTTTALTENAEFFLHRNTTSTVEIVYDILKAMGAPINRRMGIGMLTGIVTDTGHFKHA SADTFKTVAKIIEASGVEYGEVLDLMAATPQDISMRIAILKAASRVELDRVGDMIIASSHVSSFGGSASSMLINIGADVA FVGTTKGESVRVSARAKRDAVNAGVNLGQLMEDISNEYNGTGGGHSGAAGIDIIANMDEVLHKCREMTKKILENCLGTTA KEISEEEIEVNEDE
Sequences:
>Translated_334_residues MRVDEAEFFNRLLDYRNILYLCHRNADPDAVSSAFALSEAIGGTVGLVDGCNRVASVLIDRLGIEVVDKPDPANYGFVVV VDTSTKAQLNDIELTSYCVIDHHTTTALTENAEFFLHRNTTSTVEIVYDILKAMGAPINRRMGIGMLTGIVTDTGHFKHA SADTFKTVAKIIEASGVEYGEVLDLMAATPQDISMRIAILKAASRVELDRVGDMIIASSHVSSFGGSASSMLINIGADVA FVGTTKGESVRVSARAKRDAVNAGVNLGQLMEDISNEYNGTGGGHSGAAGIDIIANMDEVLHKCREMTKKILENCLGTTA KEISEEEIEVNEDE >Mature_334_residues MRVDEAEFFNRLLDYRNILYLCHRNADPDAVSSAFALSEAIGGTVGLVDGCNRVASVLIDRLGIEVVDKPDPANYGFVVV VDTSTKAQLNDIELTSYCVIDHHTTTALTENAEFFLHRNTTSTVEIVYDILKAMGAPINRRMGIGMLTGIVTDTGHFKHA SADTFKTVAKIIEASGVEYGEVLDLMAATPQDISMRIAILKAASRVELDRVGDMIIASSHVSSFGGSASSMLINIGADVA FVGTTKGESVRVSARAKRDAVNAGVNLGQLMEDISNEYNGTGGGHSGAAGIDIIANMDEVLHKCREMTKKILENCLGTTA KEISEEEIEVNEDE
Specific function: Unknown
COG id: COG0618
COG function: function code R; Exopolyphosphatase-related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003156 - InterPro: IPR001667 [H]
Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]
EC number: NA
Molecular weight: Translated: 35878; Mature: 35878
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVDEAEFFNRLLDYRNILYLCHRNADPDAVSSAFALSEAIGGTVGLVDGCNRVASVLID CCCCHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH RLGIEVVDKPDPANYGFVVVVDTSTKAQLNDIELTSYCVIDHHTTTALTENAEFFLHRNT HHCCEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCHHEEECCCEEEEECCC TSTVEIVYDILKAMGAPINRRMGIGMLTGIVTDTGHFKHASADTFKTVAKIIEASGVEYG CHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHH EVLDLMAATPQDISMRIAILKAASRVELDRVGDMIIASSHVSSFGGSASSMLINIGADVA HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHCCCCCHHEEEEECCCEE FVGTTKGESVRVSARAKRDAVNAGVNLGQLMEDISNEYNGTGGGHSGAAGIDIIANMDEV EEECCCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH LHKCREMTKKILENCLGTTAKEISEEEIEVNEDE HHHHHHHHHHHHHHHHCCHHHHHCHHHCCCCCCC >Mature Secondary Structure MRVDEAEFFNRLLDYRNILYLCHRNADPDAVSSAFALSEAIGGTVGLVDGCNRVASVLID CCCCHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH RLGIEVVDKPDPANYGFVVVVDTSTKAQLNDIELTSYCVIDHHTTTALTENAEFFLHRNT HHCCEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCHHEEECCCEEEEECCC TSTVEIVYDILKAMGAPINRRMGIGMLTGIVTDTGHFKHASADTFKTVAKIIEASGVEYG CHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHH EVLDLMAATPQDISMRIAILKAASRVELDRVGDMIIASSHVSSFGGSASSMLINIGADVA HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHCCCCCHHEEEEECCCEE FVGTTKGESVRVSARAKRDAVNAGVNLGQLMEDISNEYNGTGGGHSGAAGIDIIANMDEV EEECCCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH LHKCREMTKKILENCLGTTAKEISEEEIEVNEDE HHHHHHHHHHHHHHHHCCHHHHHCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]