| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226733
Identifier: 21226733
GI number: 21226733
Start: 761401
End: 761748
Strand: Direct
Name: 21226733
Synonym: MM_0631
Alternate gene names: NA
Gene position: 761401-761748 (Clockwise)
Preceding gene: 21226732
Following gene: 21226734
Centisome position: 18.59
GC content: 46.55
Gene sequence:
>348_bases TTGACAGAGCATAAAGAAGTAATGGAAAGTATCGGAAAAAAAATGGGATTCAAGCCCAATATCCTTGAAACGCTAGGGGA ACTCGATCCTGAATTTCTCGGAAAATACAGACGCTGCGACGGAAAACTCCTATCGGATGGGGCCCTACCCGCAAAGACAA AGATCCTCATGGCTCTTGCAGTTGTGGCATCCAAACAGTGCGAATCCTGTACCGTAGCTCAGATGAAAAGCGCCCTGAAC CATGGAGTAACCAAAGAAGAAATTATGGAGACCATGGAAGTTATCTTTATCACCTCAGGAGCTCCGGCTGTAGCTGCATG CAGGGAAGCCCTGAAGCTTCTGAAATAA
Upstream 100 bases:
>100_bases GGTGACCCGTACGCAGACGGCATTTATCAGAGCAATTAGAGCTATCTCAAGGAATATAACAACTAAAAAATAAAAAGGAT TCAAAAAAGGAGGCTATCAA
Downstream 100 bases:
>100_bases ATCATTCGGAAGTTGCATGGAATACAGGCCTGTTAACCTGGCTGAGTACTTGATTATAGATTAGATGCAGAAATGAATAG TATGTATCCAGAAATCCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Alkylhydroperoxidase Like Protein AhpD Family; Alkylhydroperoxidase AhpD Core; 4-Carboxymuconolactone Decarboxylase; Alkylhydroperoxidase-Like Protein; Alkylhydroperoxidase Family Protein
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MTEHKEVMESIGKKMGFKPNILETLGELDPEFLGKYRRCDGKLLSDGALPAKTKILMALAVVASKQCESCTVAQMKSALN HGVTKEEIMETMEVIFITSGAPAVAACREALKLLK
Sequences:
>Translated_115_residues MTEHKEVMESIGKKMGFKPNILETLGELDPEFLGKYRRCDGKLLSDGALPAKTKILMALAVVASKQCESCTVAQMKSALN HGVTKEEIMETMEVIFITSGAPAVAACREALKLLK >Mature_114_residues TEHKEVMESIGKKMGFKPNILETLGELDPEFLGKYRRCDGKLLSDGALPAKTKILMALAVVASKQCESCTVAQMKSALNH GVTKEEIMETMEVIFITSGAPAVAACREALKLLK
Specific function: Unknown
COG id: COG0599
COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12514; Mature: 12383
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 9.6 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEHKEVMESIGKKMGFKPNILETLGELDPEFLGKYRRCDGKLLSDGALPAKTKILMALA CCCHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH VVASKQCESCTVAQMKSALNHGVTKEEIMETMEVIFITSGAPAVAACREALKLLK HHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC >Mature Secondary Structure TEHKEVMESIGKKMGFKPNILETLGELDPEFLGKYRRCDGKLLSDGALPAKTKILMALA CCHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH VVASKQCESCTVAQMKSALNHGVTKEEIMETMEVIFITSGAPAVAACREALKLLK HHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA