| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21226732
Identifier: 21226732
GI number: 21226732
Start: 760966
End: 761202
Strand: Direct
Name: 21226732
Synonym: MM_0630
Alternate gene names: NA
Gene position: 760966-761202 (Clockwise)
Preceding gene: 21226731
Following gene: 21226733
Centisome position: 18.58
GC content: 41.77
Gene sequence:
>237_bases TTGAGGTGGTCAAATATGCTGAAATGTTACGATTGCCTTGAAAATAATAAAGATAGTGAAGCAGTAGGAGTATGCATCGT CTGCGGAAAAGGCCTTTGCATGGAACATATCAAACAGGTAGAATTTCCAATGAAAGGGGGATACCCTCTACCTGAGCTAA AACTCAAGAAAGATCTTCCCAGAATGATGTGCCGTGAGTGCATCGACGCTACTGTTGGAGAAGATTTCTGCGTATAA
Upstream 100 bases:
>100_bases ATCCTATTCAACTCAAGCCTGACCAGGAACACATAAAAAGAATTGTCTGTGTTCCCTGCCACATAGCTTTGAAAGAGAAC TGTCTGTTTAACGAAGTGTG
Downstream 100 bases:
>100_bases TTCTATGATTGAATATGCGTAGAACTGGATTTTTTCTTTATCCGGGGTAGAACAGTAGAAAGATTGCGGAAAGATAAAAG TCAAAATAACTGCGGAATGG
Product: Zinc finger protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MRWSNMLKCYDCLENNKDSEAVGVCIVCGKGLCMEHIKQVEFPMKGGYPLPELKLKKDLPRMMCRECIDATVGEDFCV
Sequences:
>Translated_78_residues MRWSNMLKCYDCLENNKDSEAVGVCIVCGKGLCMEHIKQVEFPMKGGYPLPELKLKKDLPRMMCRECIDATVGEDFCV >Mature_78_residues MRWSNMLKCYDCLENNKDSEAVGVCIVCGKGLCMEHIKQVEFPMKGGYPLPELKLKKDLPRMMCRECIDATVGEDFCV
Specific function: Unknown
COG id: COG4855
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8893; Mature: 8893
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
10.3 %Cys (Translated Protein) 7.7 %Met (Translated Protein) 17.9 %Cys+Met (Translated Protein) 10.3 %Cys (Mature Protein) 7.7 %Met (Mature Protein) 17.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWSNMLKCYDCLENNKDSEAVGVCIVCGKGLCMEHIKQVEFPMKGGYPLPELKLKKDLP CCHHHHHHHHHHHCCCCCCCHHEEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH RMMCRECIDATVGEDFCV HHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRWSNMLKCYDCLENNKDSEAVGVCIVCGKGLCMEHIKQVEFPMKGGYPLPELKLKKDLP CCHHHHHHHHHHHCCCCCCCHHEEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH RMMCRECIDATVGEDFCV HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA