Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226709
Identifier: 21226709
GI number: 21226709
Start: 738207
End: 738368
Strand: Reverse
Name: 21226709
Synonym: MM_0607
Alternate gene names: NA
Gene position: 738368-738207 (Counterclockwise)
Preceding gene: 21226712
Following gene: 21226708
Centisome position: 18.03
GC content: 40.74
Gene sequence:
>162_bases GTGGTTTTCGGCTGTAAAAGGTGCGGCAAGTGCAGGGATGTATGTCCTGTGGGCGCTATTTATGAAGAAAACGAGCTTGC TAAAATCGATACTGAAAAATGTAACCTCTGCATGAAATGCATAGACGAATGTACCAACAGATCCATTATTTATATGGAAT GA
Upstream 100 bases:
>100_bases ATGATTTTTTATGAAATATAATTTCCCTGTGCCTGTTCAGAAACTAATATATTCTTCAGCTTCCAAAGGTTCACTGATGT CAGAGATGAATGGGTATGTT
Downstream 100 bases:
>100_bases TGTGACAGCAAAGCAAGATGGGAACTGAAGAAAATTAGAATGAATTTAGAGAAAAAACTAAAATGAAACCTAAAAGAGTC AGAAAATTCAGGAAAAGGTG
Product: ferredoxin
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 53; Mature: 53
Protein sequence:
>53_residues MVFGCKRCGKCRDVCPVGAIYEENELAKIDTEKCNLCMKCIDECTNRSIIYME
Sequences:
>Translated_53_residues MVFGCKRCGKCRDVCPVGAIYEENELAKIDTEKCNLCMKCIDECTNRSIIYME >Mature_53_residues MVFGCKRCGKCRDVCPVGAIYEENELAKIDTEKCNLCMKCIDECTNRSIIYME
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6071; Mature: 6071
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
15.1 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 20.8 %Cys+Met (Translated Protein) 15.1 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 20.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFGCKRCGKCRDVCPVGAIYEENELAKIDTEKCNLCMKCIDECTNRSIIYME CCCCCCCCCCCCCCCCCCCEECCCCCEECCCHHHHHHHHHHHHHCCCCEEEEC >Mature Secondary Structure MVFGCKRCGKCRDVCPVGAIYEENELAKIDTEKCNLCMKCIDECTNRSIIYME CCCCCCCCCCCCCCCCCCCEECCCCCEECCCHHHHHHHHHHHHHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA