Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
---|---|
Accession | NC_003901 |
Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21226697
Identifier: 21226697
GI number: 21226697
Start: 727034
End: 727399
Strand: Direct
Name: 21226697
Synonym: MM_0595
Alternate gene names: NA
Gene position: 727034-727399 (Clockwise)
Preceding gene: 21226696
Following gene: 21226698
Centisome position: 17.75
GC content: 46.45
Gene sequence:
>366_bases TTGAAAATTATAATTGACACCAACGGATTCATGATCCCTGTCCAGTTCGGAGTGGATATCTTTGAAGAGCTGAAAAGGCT GGGTTTTAATGAGTTCTATGTGCCTGAAGCTGTTGTATTTGAAATAGAAAAACTCATAAAGCGGGAGAAAGGTTCAAACA GGACAGCCGCAAAGGTTGCCAGGTCCATGATGGAAAGGTGCATGCGGATCGCAGGCAAGGGACCTGCTGATGATGTGATC CTCAGGCTCGCAAAAGAGATGGGAGCGGCTGTTCTGACAAACGATATAGGGTTGAAGCGCAGGCTTGCTGAAAGCGGGAT CCAGACCATATCCCTGCGCCAGAAAAACAAACTGGATTTTGTTTGA
Upstream 100 bases:
>100_bases CACTCAAGCGTCCGATAAGTGCAGCCATAGGAGCTATGGTTGCGATCAGCAGGAGAGTCGATTCCCGCTGGCGGCTCATT GGAGTAGGGGTAATAAAGAG
Downstream 100 bases:
>100_bases AAAACCCACCGGAGATTCCGGGGCAGCAGTTCGATTGATTAAGTTTACGGGTGATTAGCAGATGTATAAATTAATGAAAC TCGTTGATACGGTTCGTATC
Product: hypothetical protein
Products: NA
Alternate protein names: Rpo Operon Protein; PilT Protein Domain Protein; Rotein Of PilT N-Term./Vapc Superfamily
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MKIIIDTNGFMIPVQFGVDIFEELKRLGFNEFYVPEAVVFEIEKLIKREKGSNRTAAKVARSMMERCMRIAGKGPADDVI LRLAKEMGAAVLTNDIGLKRRLAESGIQTISLRQKNKLDFV
Sequences:
>Translated_121_residues MKIIIDTNGFMIPVQFGVDIFEELKRLGFNEFYVPEAVVFEIEKLIKREKGSNRTAAKVARSMMERCMRIAGKGPADDVI LRLAKEMGAAVLTNDIGLKRRLAESGIQTISLRQKNKLDFV >Mature_121_residues MKIIIDTNGFMIPVQFGVDIFEELKRLGFNEFYVPEAVVFEIEKLIKREKGSNRTAAKVARSMMERCMRIAGKGPADDVI LRLAKEMGAAVLTNDIGLKRRLAESGIQTISLRQKNKLDFV
Specific function: Unknown
COG id: COG1412
COG function: function code R; Uncharacterized proteins of PilT N-term./Vapc superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13660; Mature: 13660
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIIDTNGFMIPVQFGVDIFEELKRLGFNEFYVPEAVVFEIEKLIKREKGSNRTAAKVA CEEEEECCCEEEEHHHCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH RSMMERCMRIAGKGPADDVILRLAKEMGAAVLTNDIGLKRRLAESGIQTISLRQKNKLDF HHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEEHHCCCCCCCC V C >Mature Secondary Structure MKIIIDTNGFMIPVQFGVDIFEELKRLGFNEFYVPEAVVFEIEKLIKREKGSNRTAAKVA CEEEEECCCEEEEHHHCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH RSMMERCMRIAGKGPADDVILRLAKEMGAAVLTNDIGLKRRLAESGIQTISLRQKNKLDF HHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEEHHCCCCCCCC V C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA