Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
---|---|
Accession | NC_003901 |
Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is eif2g [H]
Identifier: 21226696
GI number: 21226696
Start: 725742
End: 727037
Strand: Direct
Name: eif2g [H]
Synonym: MM_0594
Alternate gene names: 21226696
Gene position: 725742-727037 (Clockwise)
Preceding gene: 21226695
Following gene: 21226697
Centisome position: 17.72
GC content: 47.76
Gene sequence:
>1296_bases ATGCACAGATTTCGGAAAAATACCTGCCTTATATCAGATTATTTTCACTCTACTGGAGGAAACTACAACTTGAGTCAGCC CTGTGTTAATATCGGCATGGTAGGTCATGTCGACCATGGAAAAACCACACTTGTTAGAGCTTTATCCGGCGTGTGGACGG ATACGCATAGTGAAGAAGTAAAAAGAGGAATTTCGATAAGATTGGGGTATGCAGATTCCCCATTCATGAAATGCCCGAAA TGTCCTGAACCTCAGTGTTATACTGTCGAAAAAACCTGCCCTAACTGCGGAGAAAAAACGGAAGAGCACAGGACAGTTTC CTTTGTAGACGCTCCCGGGCACGAAACCCTGATGGCAACCATGCTTTCCGGTGCTGCAATTATGGACGGGGCAGTGCTTG TAATTGCCGCAAACGAAGACTGCCCGCAGCCCCAGACAAAGGAACACCTCATGGCCCTGGACATCATCGGGATTAAAAAC ATTGTTATAGTCCAGAATAAAATCGACCTTGTGTCAAGGGAAAAAATTATCGAGAACTACCACCAGATAAAAGAGTTTGT CAAGGGCACTGTTGCCGAAAATGCACCTGTAATCCCTATTTCTGCCCAGCAGAATATTAATATTGATATTCTCATCGACG CCCTGGAAACCCAGATCCCGACTCCTTCCCATAAAGTAGATAAGCCAGCCAGCATGCTGATTGCCCGGTCTTTTGACATT AATAAACCAGGTGCTTCAATTGAGGAAATCCGCGGAGGAGTTATAGGAGGAACCCTTACCGAGGGCGTGCTTCATCCCGG AGACGAGCTTGAAATCAGGCCTGGAATAAAGGTCACAACAGAAGGCAGCACCAGATGGATCCCTATTTTGACCACGGTTT CATCAATTTATGCAGGAGCAACAAAGGTAGATGAAGCAACCCCCGGAGGGCTTCTTGCCGTAGGAACTTATCTTGACCCT ACCCTGACAAAGGGAGACTCCCTTACGGGGCAGATGGCAGGTGTTCCGGGTACCCTTCCTGAAACAAGGCACCAGTTTGT TATGGAGCTTCATCTTCTGGACAGGGTTGTGGGAGTTACCAGGGAAGAGAAAATTAATGAAATCAAGACCAGTGAACCCC TTATGCTCAACATAGGAACCGCTACAACTGTAGGTGTGGTCACAAGTGCCCGGAAGAATGAAGCTCAGGTGGCACTCAAG CGTCCGATAAGTGCAGCCATAGGAGCTATGGTTGCGATCAGCAGGAGAGTCGATTCCCGCTGGCGGCTCATTGGAGTAGG GGTAATAAAGAGTTGA
Upstream 100 bases:
>100_bases AGTTACAATTACAATAAACCAAGGATCACATAATAAAATTAAGAATCAGACCAGGTTTGAAATTGAAATCTGAAAGCCCC AGGGAAGAAAAAAGTCCTGA
Downstream 100 bases:
>100_bases AAATTATAATTGACACCAACGGATTCATGATCCCTGTCCAGTTCGGAGTGGATATCTTTGAAGAGCTGAAAAGGCTGGGT TTTAATGAGTTCTATGTGCC
Product: translation initiation factor IF-2 subunit gamma
Products: NA
Alternate protein names: aIF2-gamma; eIF-2-gamma [H]
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MHRFRKNTCLISDYFHSTGGNYNLSQPCVNIGMVGHVDHGKTTLVRALSGVWTDTHSEEVKRGISIRLGYADSPFMKCPK CPEPQCYTVEKTCPNCGEKTEEHRTVSFVDAPGHETLMATMLSGAAIMDGAVLVIAANEDCPQPQTKEHLMALDIIGIKN IVIVQNKIDLVSREKIIENYHQIKEFVKGTVAENAPVIPISAQQNINIDILIDALETQIPTPSHKVDKPASMLIARSFDI NKPGASIEEIRGGVIGGTLTEGVLHPGDELEIRPGIKVTTEGSTRWIPILTTVSSIYAGATKVDEATPGGLLAVGTYLDP TLTKGDSLTGQMAGVPGTLPETRHQFVMELHLLDRVVGVTREEKINEIKTSEPLMLNIGTATTVGVVTSARKNEAQVALK RPISAAIGAMVAISRRVDSRWRLIGVGVIKS
Sequences:
>Translated_431_residues MHRFRKNTCLISDYFHSTGGNYNLSQPCVNIGMVGHVDHGKTTLVRALSGVWTDTHSEEVKRGISIRLGYADSPFMKCPK CPEPQCYTVEKTCPNCGEKTEEHRTVSFVDAPGHETLMATMLSGAAIMDGAVLVIAANEDCPQPQTKEHLMALDIIGIKN IVIVQNKIDLVSREKIIENYHQIKEFVKGTVAENAPVIPISAQQNINIDILIDALETQIPTPSHKVDKPASMLIARSFDI NKPGASIEEIRGGVIGGTLTEGVLHPGDELEIRPGIKVTTEGSTRWIPILTTVSSIYAGATKVDEATPGGLLAVGTYLDP TLTKGDSLTGQMAGVPGTLPETRHQFVMELHLLDRVVGVTREEKINEIKTSEPLMLNIGTATTVGVVTSARKNEAQVALK RPISAAIGAMVAISRRVDSRWRLIGVGVIKS >Mature_431_residues MHRFRKNTCLISDYFHSTGGNYNLSQPCVNIGMVGHVDHGKTTLVRALSGVWTDTHSEEVKRGISIRLGYADSPFMKCPK CPEPQCYTVEKTCPNCGEKTEEHRTVSFVDAPGHETLMATMLSGAAIMDGAVLVIAANEDCPQPQTKEHLMALDIIGIKN IVIVQNKIDLVSREKIIENYHQIKEFVKGTVAENAPVIPISAQQNINIDILIDALETQIPTPSHKVDKPASMLIARSFDI NKPGASIEEIRGGVIGGTLTEGVLHPGDELEIRPGIKVTTEGSTRWIPILTTVSSIYAGATKVDEATPGGLLAVGTYLDP TLTKGDSLTGQMAGVPGTLPETRHQFVMELHLLDRVVGVTREEKINEIKTSEPLMLNIGTATTVGVVTSARKNEAQVALK RPISAAIGAMVAISRRVDSRWRLIGVGVIKS
Specific function: eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA [H]
COG id: COG5257
COG function: function code J; Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase)
Gene ontology:
Cell location: Cytoplasmic, and membrane-associated [C]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EIF2G subfamily [H]
Homologues:
Organism=Homo sapiens, GI4503507, Length=428, Percent_Identity=43.4579439252336, Blast_Score=367, Evalue=1e-101, Organism=Homo sapiens, GI34147630, Length=264, Percent_Identity=31.4393939393939, Blast_Score=122, Evalue=4e-28, Organism=Homo sapiens, GI54607086, Length=275, Percent_Identity=30.1818181818182, Blast_Score=93, Evalue=5e-19, Organism=Escherichia coli, GI1789737, Length=347, Percent_Identity=28.5302593659942, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1790412, Length=350, Percent_Identity=28.5714285714286, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI2367247, Length=402, Percent_Identity=26.3681592039801, Blast_Score=107, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17509919, Length=422, Percent_Identity=45.4976303317536, Blast_Score=385, Evalue=1e-107, Organism=Caenorhabditis elegans, GI25141371, Length=353, Percent_Identity=33.7110481586402, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17556456, Length=310, Percent_Identity=30.3225806451613, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17506081, Length=258, Percent_Identity=26.7441860465116, Blast_Score=82, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6320863, Length=421, Percent_Identity=43.7054631828979, Blast_Score=364, Evalue=1e-101, Organism=Saccharomyces cerevisiae, GI6324761, Length=332, Percent_Identity=33.1325301204819, Blast_Score=129, Evalue=7e-31, Organism=Drosophila melanogaster, GI24647046, Length=421, Percent_Identity=42.9928741092637, Blast_Score=371, Evalue=1e-103, Organism=Drosophila melanogaster, GI24647048, Length=421, Percent_Identity=42.9928741092637, Blast_Score=370, Evalue=1e-103, Organism=Drosophila melanogaster, GI19921738, Length=252, Percent_Identity=32.9365079365079, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI281363316, Length=263, Percent_Identity=31.1787072243346, Blast_Score=112, Evalue=6e-25, Organism=Drosophila melanogaster, GI17864358, Length=263, Percent_Identity=31.1787072243346, Blast_Score=112, Evalue=6e-25, Organism=Drosophila melanogaster, GI19922690, Length=257, Percent_Identity=29.1828793774319, Blast_Score=91, Evalue=2e-18,
Paralogues:
None
Copy number: 20568 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000795 - InterPro: IPR022424 - InterPro: IPR015256 - InterPro: IPR009001 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF09173 eIF2_C; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: NA
Molecular weight: Translated: 46620; Mature: 46620
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRFRKNTCLISDYFHSTGGNYNLSQPCVNIGMVGHVDHGKTTLVRALSGVWTDTHSEEV CCCCCCCEEEEEHHHHCCCCCCCCCCCHHEECEEEECCCCHHHHHHHHHHCCCCCCHHHH KRGISIRLGYADSPFMKCPKCPEPQCYTVEKTCPNCGEKTEEHRTVSFVDAPGHETLMAT HCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHH MLSGAAIMDGAVLVIAANEDCPQPQTKEHLMALDIIGIKNIVIVQNKIDLVSREKIIENY HHCCCEEECCEEEEEECCCCCCCCCHHHHEEEEEEECCCEEEEEECCHHHHHHHHHHHHH HQIKEFVKGTVAENAPVIPISAQQNINIDILIDALETQIPTPSHKVDKPASMLIARSFDI HHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEEHHHCCCCCCCCCCCCHHEEEEEECCC NKPGASIEEIRGGVIGGTLTEGVLHPGDELEIRPGIKVTTEGSTRWIPILTTVSSIYAGA CCCCCCHHHHCCCEECCHHHHCCCCCCCCEEECCCEEEEECCCCEEEEHHHHHHHHHCCC TKVDEATPGGLLAVGTYLDPTLTKGDSLTGQMAGVPGTLPETRHQFVMELHLLDRVVGVT CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC REEKINEIKTSEPLMLNIGTATTVGVVTSARKNEAQVALKRPISAAIGAMVAISRRVDSR HHHHHHHHCCCCCEEEECCCCEEEHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCC WRLIGVGVIKS EEEEEEEEECC >Mature Secondary Structure MHRFRKNTCLISDYFHSTGGNYNLSQPCVNIGMVGHVDHGKTTLVRALSGVWTDTHSEEV CCCCCCCEEEEEHHHHCCCCCCCCCCCHHEECEEEECCCCHHHHHHHHHHCCCCCCHHHH KRGISIRLGYADSPFMKCPKCPEPQCYTVEKTCPNCGEKTEEHRTVSFVDAPGHETLMAT HCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHH MLSGAAIMDGAVLVIAANEDCPQPQTKEHLMALDIIGIKNIVIVQNKIDLVSREKIIENY HHCCCEEECCEEEEEECCCCCCCCCHHHHEEEEEEECCCEEEEEECCHHHHHHHHHHHHH HQIKEFVKGTVAENAPVIPISAQQNINIDILIDALETQIPTPSHKVDKPASMLIARSFDI HHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEEHHHCCCCCCCCCCCCHHEEEEEECCC NKPGASIEEIRGGVIGGTLTEGVLHPGDELEIRPGIKVTTEGSTRWIPILTTVSSIYAGA CCCCCCHHHHCCCEECCHHHHCCCCCCCCEEECCCEEEEECCCCEEEEHHHHHHHHHCCC TKVDEATPGGLLAVGTYLDPTLTKGDSLTGQMAGVPGTLPETRHQFVMELHLLDRVVGVT CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC REEKINEIKTSEPLMLNIGTATTVGVVTSARKNEAQVALKRPISAAIGAMVAISRRVDSR HHHHHHHHCCCCCEEEECCCCEEEHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCC WRLIGVGVIKS EEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]