Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226685
Identifier: 21226685
GI number: 21226685
Start: 711909
End: 712703
Strand: Direct
Name: 21226685
Synonym: MM_0583
Alternate gene names: NA
Gene position: 711909-712703 (Clockwise)
Preceding gene: 21226684
Following gene: 21226686
Centisome position: 17.38
GC content: 44.15
Gene sequence:
>795_bases ATGACTGCAATGGGCATAATCGGCTGCAGGGTATTCGAGGACGAAATTGTCCACGTGCTTTCAGGTGACCCTGAAGTGGA AAGGGTTTACCTCGTAAAAAACAACGAAAATATAGGCCTACAGGACAAACTTAAAAATCAGGGTCTTAAACCTCTGGCAC TGCCTGTCCATGAAATAAAAGCCTGCCTCAAGAAAAGTGATGAGTTCAGTGTCATCGTCCAGCTTCAGGAGATAGGACTT CATTCAGACCCTTCCAGGCTCAAAAACAAAACATATACAAACCTGAGCCTTATGTCAGGTTTTACGGACGGAATTCTCCT TTTTTACGGGCTCTGTGGGCATGCTTTTTCAAAGATGCGGAAAGATTTTGCATATACAGGGTGCTCTCTACAGCTTCTTC AGGACAGAAGCACAGGAGGAACAACCCGGCCTCTTGACGACTGTATTGCAGCAGCCCTTGGAGGCAATTCCCGCTATCGG GAAATTCTTAAAAGCCATAGTGATACCTTTTTTTTAACTCCGATGTGGGCAGTAAACTGGAAAAGCGCTTTCGGGACATT TGAAGGAATGATAGGGGGCTTTGAGTTCACCCCGGAAAACCTGAGAGAACTCGGGTATCGAAAAGTAGCACGAGTCAATA CAGGGCTCTCCTACGAACCTGATTTTGAAAAAAAGATAGAGGAATTTGCTCTTAACTTCGGTTTTGAGATTATAGAACTT GAAGGCAGCACTGAAATAGCACAAAAATCATACAAAATGATGCAGAATATGCTGCTCAGGCCGCTTAAAACTTGA
Upstream 100 bases:
>100_bases GCTAAAAGGAACAGGAAATTAAAAAACCTTGTTTTCAGCTAAGAGTTATTAGCTCTCCCGGTAAGGATATTTATTAATAG TCCCTGGTTGAGCCTGTATT
Downstream 100 bases:
>100_bases GAATGTTTCAGGCCAGCTTTGAAATTAGAAATTGTCCTGAAAGCATTATACCGGGTTATTGAAATATACCTGAGGATTAA TCAGTGTATTTTTTTAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MTAMGIIGCRVFEDEIVHVLSGDPEVERVYLVKNNENIGLQDKLKNQGLKPLALPVHEIKACLKKSDEFSVIVQLQEIGL HSDPSRLKNKTYTNLSLMSGFTDGILLFYGLCGHAFSKMRKDFAYTGCSLQLLQDRSTGGTTRPLDDCIAAALGGNSRYR EILKSHSDTFFLTPMWAVNWKSAFGTFEGMIGGFEFTPENLRELGYRKVARVNTGLSYEPDFEKKIEEFALNFGFEIIEL EGSTEIAQKSYKMMQNMLLRPLKT
Sequences:
>Translated_264_residues MTAMGIIGCRVFEDEIVHVLSGDPEVERVYLVKNNENIGLQDKLKNQGLKPLALPVHEIKACLKKSDEFSVIVQLQEIGL HSDPSRLKNKTYTNLSLMSGFTDGILLFYGLCGHAFSKMRKDFAYTGCSLQLLQDRSTGGTTRPLDDCIAAALGGNSRYR EILKSHSDTFFLTPMWAVNWKSAFGTFEGMIGGFEFTPENLRELGYRKVARVNTGLSYEPDFEKKIEEFALNFGFEIIEL EGSTEIAQKSYKMMQNMLLRPLKT >Mature_263_residues TAMGIIGCRVFEDEIVHVLSGDPEVERVYLVKNNENIGLQDKLKNQGLKPLALPVHEIKACLKKSDEFSVIVQLQEIGLH SDPSRLKNKTYTNLSLMSGFTDGILLFYGLCGHAFSKMRKDFAYTGCSLQLLQDRSTGGTTRPLDDCIAAALGGNSRYRE ILKSHSDTFFLTPMWAVNWKSAFGTFEGMIGGFEFTPENLRELGYRKVARVNTGLSYEPDFEKKIEEFALNFGFEIIELE GSTEIAQKSYKMMQNMLLRPLKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29732; Mature: 29600
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAMGIIGCRVFEDEIVHVLSGDPEVERVYLVKNNENIGLQDKLKNQGLKPLALPVHEIK CCCCHHHHHEEHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCEECCHHHHH ACLKKSDEFSVIVQLQEIGLHSDPSRLKNKTYTNLSLMSGFTDGILLFYGLCGHAFSKMR HHHHCCCCCEEEEEEECCCCCCCHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHH KDFAYTGCSLQLLQDRSTGGTTRPLDDCIAAALGGNSRYREILKSHSDTFFLTPMWAVNW HHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCEEEECCEEEECH KSAFGTFEGMIGGFEFTPENLRELGYRKVARVNTGLSYEPDFEKKIEEFALNFGFEIIEL HHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCEEEEEE EGSTEIAQKSYKMMQNMLLRPLKT CCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TAMGIIGCRVFEDEIVHVLSGDPEVERVYLVKNNENIGLQDKLKNQGLKPLALPVHEIK CCCHHHHHEEHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCEECCHHHHH ACLKKSDEFSVIVQLQEIGLHSDPSRLKNKTYTNLSLMSGFTDGILLFYGLCGHAFSKMR HHHHCCCCCEEEEEEECCCCCCCHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHH KDFAYTGCSLQLLQDRSTGGTTRPLDDCIAAALGGNSRYREILKSHSDTFFLTPMWAVNW HHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCEEEECCEEEECH KSAFGTFEGMIGGFEFTPENLRELGYRKVARVNTGLSYEPDFEKKIEEFALNFGFEIIEL HHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCEEEEEE EGSTEIAQKSYKMMQNMLLRPLKT CCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA