Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226684
Identifier: 21226684
GI number: 21226684
Start: 710372
End: 711502
Strand: Direct
Name: 21226684
Synonym: MM_0582
Alternate gene names: NA
Gene position: 710372-711502 (Clockwise)
Preceding gene: 21226676
Following gene: 21226685
Centisome position: 17.34
GC content: 44.56
Gene sequence:
>1131_bases ATGAAAATCTTACTGTTCATATGCGGAGAAGGGCTTGGACACACAGGGCGTTGCCTCGCTCTGGGGAAAGAGTTCCTGGC AGCAGGGCATGAGGTTAATTTTGGAGCTTATGGTTACTCAAAGGGTCTGGTGCAAAAAACAGGTTATTCGGCTTATGAAA TTCCTTCGGAAATAAAATTGGCCGGAGAAGCAGGGACCTTTGACATAAGGAAATCCATTAAAGAAACACTGAATAACCTT TCCCCTTCCGGGTTCAGAAAAATCCTGAGGTTGATAGAAAAACTGGATCCAGATGTAGTGCTTTCGGATGGGTACTATAC AGGCATCCTTGCTGCGCAGAAAAGGAAAGTCCCTGTTTATTTCATAGGGCATCAGTTCAATATGGAAGAATTTTTTTGGA AAAAGGGACTCTTTGCAGGAATTGCAGGGATATTTGTCAAAAGGTTTTACAATTACGTATTCAGCAGTGTTGATGGGATA ATAGTCCCTGATTACCCGCTCCCTTACTCTGTGAACCGAAAAAACTTCACTATCTCCAGGGCTGTCAATGATAATATATT TTTCAGCGGCCCTCTTATCCGGTGCAGATACCAGGAAGCTGGAGAAAAAGCTTTCAAGCGCCCGAATGTACTTTCAACAA TAGGGGCTTTCGGGTACAGGGCCGCCGTATTCAGGAACGTACTTGAGGCTGCAAAACTGGACCCCAGTATCTATTATACC TTTATCTCAGGGCCTGAAATAGATCCGGAGCAGTTTTCAAAAGTTCCGGAAAACGTTGAATTCACGGGTTTTACAGAAAA TCCTTTTCCTTATTATAAAGGCTCTGATCTTGTTATTACTGCAGGCGGGCACGGAACCATTATGGAGAGCCTTGCCTTTG GGCTTCCCATACTTTCCTTTCCGGACGAAAAACATGCAGAGCAGGAGAATAATGCCTCAGTCCTCGAAGAGGCGGGGTAT GGAAAGAGGATGAGCTATCTGACACCCCCTGAGGTTATCCTGGCCTGTATCCGGGAAATCTTTGAAGATGAAAATTACAG TAAAAAAACCCGAAGGCTAATGGAACTTGCCGAAGTTCTGGACGGACCTGCCGCAGTCCGAAAATTTCTTGAAGAAAAAC ATAGAGGGTAA
Upstream 100 bases:
>100_bases TACAGGAAAGGGTTTAACTTAAGAAAGTTTAACTTAAGAAAGTTTAACTTAATAAACATATTTATTTTTAGAGATTACGC CAGGGAAGGGCGATAAGAAT
Downstream 100 bases:
>100_bases CCCGCGAAAAAAAACCAGAGAAAGAAGAAGCCCTGAAAAAAAAGCAAATAGAAATAAACACATTAAGAAAAATGAAAAAA TTTCCGTAAAAGCGTCCGGA
Product: glycosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MKILLFICGEGLGHTGRCLALGKEFLAAGHEVNFGAYGYSKGLVQKTGYSAYEIPSEIKLAGEAGTFDIRKSIKETLNNL SPSGFRKILRLIEKLDPDVVLSDGYYTGILAAQKRKVPVYFIGHQFNMEEFFWKKGLFAGIAGIFVKRFYNYVFSSVDGI IVPDYPLPYSVNRKNFTISRAVNDNIFFSGPLIRCRYQEAGEKAFKRPNVLSTIGAFGYRAAVFRNVLEAAKLDPSIYYT FISGPEIDPEQFSKVPENVEFTGFTENPFPYYKGSDLVITAGGHGTIMESLAFGLPILSFPDEKHAEQENNASVLEEAGY GKRMSYLTPPEVILACIREIFEDENYSKKTRRLMELAEVLDGPAAVRKFLEEKHRG
Sequences:
>Translated_376_residues MKILLFICGEGLGHTGRCLALGKEFLAAGHEVNFGAYGYSKGLVQKTGYSAYEIPSEIKLAGEAGTFDIRKSIKETLNNL SPSGFRKILRLIEKLDPDVVLSDGYYTGILAAQKRKVPVYFIGHQFNMEEFFWKKGLFAGIAGIFVKRFYNYVFSSVDGI IVPDYPLPYSVNRKNFTISRAVNDNIFFSGPLIRCRYQEAGEKAFKRPNVLSTIGAFGYRAAVFRNVLEAAKLDPSIYYT FISGPEIDPEQFSKVPENVEFTGFTENPFPYYKGSDLVITAGGHGTIMESLAFGLPILSFPDEKHAEQENNASVLEEAGY GKRMSYLTPPEVILACIREIFEDENYSKKTRRLMELAEVLDGPAAVRKFLEEKHRG >Mature_376_residues MKILLFICGEGLGHTGRCLALGKEFLAAGHEVNFGAYGYSKGLVQKTGYSAYEIPSEIKLAGEAGTFDIRKSIKETLNNL SPSGFRKILRLIEKLDPDVVLSDGYYTGILAAQKRKVPVYFIGHQFNMEEFFWKKGLFAGIAGIFVKRFYNYVFSSVDGI IVPDYPLPYSVNRKNFTISRAVNDNIFFSGPLIRCRYQEAGEKAFKRPNVLSTIGAFGYRAAVFRNVLEAAKLDPSIYYT FISGPEIDPEQFSKVPENVEFTGFTENPFPYYKGSDLVITAGGHGTIMESLAFGLPILSFPDEKHAEQENNASVLEEAGY GKRMSYLTPPEVILACIREIFEDENYSKKTRRLMELAEVLDGPAAVRKFLEEKHRG
Specific function: Unknown
COG id: COG1819
COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 28 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y582_METMA (Q8PZB2)
Other databases:
- EMBL: AE008384 - RefSeq: NP_632606.1 - ProteinModelPortal: Q8PZB2 - GeneID: 1478924 - GenomeReviews: AE008384_GR - KEGG: mma:MM_0582 - NMPDR: fig|192952.1.peg.582 - HOGENOM: HBG541230 - OMA: VYFIGHQ - ProtClustDB: CLSK876508 - BioCyc: MMAZ192952:MM0582-MONOMER - InterPro: IPR004276 - InterPro: IPR007235
Pfam domain/function: PF04101 Glyco_tran_28_C; PF03033 Glyco_transf_28
EC number: NA
Molecular weight: Translated: 42121; Mature: 42121
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILLFICGEGLGHTGRCLALGKEFLAAGHEVNFGAYGYSKGLVQKTGYSAYEIPSEIKL CEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCHHCCCCCEEE AGEAGTFDIRKSIKETLNNLSPSGFRKILRLIEKLDPDVVLSDGYYTGILAAQKRKVPVY CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCEEEEEEHHCCCCCEE FIGHQFNMEEFFWKKGLFAGIAGIFVKRFYNYVFSSVDGIIVPDYPLPYSVNRKNFTISR EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEE AVNDNIFFSGPLIRCRYQEAGEKAFKRPNVLSTIGAFGYRAAVFRNVLEAAKLDPSIYYT ECCCCEEECCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE FISGPEIDPEQFSKVPENVEFTGFTENPFPYYKGSDLVITAGGHGTIMESLAFGLPILSF EECCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCC PDEKHAEQENNASVLEEAGYGKRMSYLTPPEVILACIREIFEDENYSKKTRRLMELAEVL CCHHHHCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH DGPAAVRKFLEEKHRG CCHHHHHHHHHHHCCC >Mature Secondary Structure MKILLFICGEGLGHTGRCLALGKEFLAAGHEVNFGAYGYSKGLVQKTGYSAYEIPSEIKL CEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCHHCCCCCEEE AGEAGTFDIRKSIKETLNNLSPSGFRKILRLIEKLDPDVVLSDGYYTGILAAQKRKVPVY CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCEEEEEEHHCCCCCEE FIGHQFNMEEFFWKKGLFAGIAGIFVKRFYNYVFSSVDGIIVPDYPLPYSVNRKNFTISR EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEE AVNDNIFFSGPLIRCRYQEAGEKAFKRPNVLSTIGAFGYRAAVFRNVLEAAKLDPSIYYT ECCCCEEECCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE FISGPEIDPEQFSKVPENVEFTGFTENPFPYYKGSDLVITAGGHGTIMESLAFGLPILSF EECCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCC PDEKHAEQENNASVLEEAGYGKRMSYLTPPEVILACIREIFEDENYSKKTRRLMELAEVL CCHHHHCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH DGPAAVRKFLEEKHRG CCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12125824