Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226686
Identifier: 21226686
GI number: 21226686
Start: 712965
End: 713771
Strand: Direct
Name: 21226686
Synonym: MM_0584
Alternate gene names: NA
Gene position: 712965-713771 (Clockwise)
Preceding gene: 21226685
Following gene: 21226687
Centisome position: 17.4
GC content: 46.1
Gene sequence:
>807_bases ATGCCGGTAATAACCATATTAGGGTGCAGGATGTTCGAAGACGAGATAATGCACCTTCTGGAAAACGATCCCGAGATTGA AGAAGTGCTTGTAGTTGAAAATGAAGACTGCGTGGGCATAATGAAAAAGATGGCTGAAGCAGGACTTGCATATACTGCTC TTTCCCCCGAGAAAATCCCCGAAAAGTCTTCGGAGACAGGAAAAGGCCTGACCCTGATAGTTTATATGCTTGAGCTTGCC CTCCACGCAATCCCTGAAAACCTTAAAAAGACCGTTTACTCAAAAGTCGAGCTTATGTCTTCCTGTTCGGACGGGATTCT GCTATTTTACGGGCTCTGCGGAAACGTGCTCGGGAAAATAGAAGAGGATTTCAAAGACCTTGGCTGCCAGGTCTGCATAC TGAAAGAAGAAAACGGAGAAATCGTTGACGACTGCATAGGAGCCGTTCTGGGTGGGAGGAAACAATACCTTGAAGTCCTG AAAAGCTGCAGAGGAGTGGGGACCTTTTTCCTGACACCCATGTGGGCTGTAAACTGGAGGGAAATGATAAGAACCTCAGG CCTGAGCCAGAACCCTGATGATATATCCATGTCAAAGTTCGTCTTTGATTATGCAGGCTACAAAAGAGTTGCAAGACTGG ACACGGGACTGGCTTATGAAAAAGATTTTGATGCCTGCGTAAAAGAATTCTCAACACTCTTTGAGTTTGAAGTTACGGAA CTTGAAGGGACTTTACACCTGATAGAAAACTGTTACGCAAAAACAAAAGCCTCGGTATTCGAAGCCTGCCCTCGCTCGCA GGCCTGA
Upstream 100 bases:
>100_bases TATTATTCCGGACACATGCTGGTTGCATGAATTGTTTCAGGGACCTCCCTATCAGTTTTTAAAAAAGAAGTAACAAGTTG CACGTGCCAGAGGAGCTTAC
Downstream 100 bases:
>100_bases AGCCTCTTATCTGAAAATATTTTTCCCGGCTCCATTTTACCGTCTTAGCCGGGCTTAAGTTTCCCGGCCCTTATCCTGTT TATTTCCTCCTTCCTGCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MPVITILGCRMFEDEIMHLLENDPEIEEVLVVENEDCVGIMKKMAEAGLAYTALSPEKIPEKSSETGKGLTLIVYMLELA LHAIPENLKKTVYSKVELMSSCSDGILLFYGLCGNVLGKIEEDFKDLGCQVCILKEENGEIVDDCIGAVLGGRKQYLEVL KSCRGVGTFFLTPMWAVNWREMIRTSGLSQNPDDISMSKFVFDYAGYKRVARLDTGLAYEKDFDACVKEFSTLFEFEVTE LEGTLHLIENCYAKTKASVFEACPRSQA
Sequences:
>Translated_268_residues MPVITILGCRMFEDEIMHLLENDPEIEEVLVVENEDCVGIMKKMAEAGLAYTALSPEKIPEKSSETGKGLTLIVYMLELA LHAIPENLKKTVYSKVELMSSCSDGILLFYGLCGNVLGKIEEDFKDLGCQVCILKEENGEIVDDCIGAVLGGRKQYLEVL KSCRGVGTFFLTPMWAVNWREMIRTSGLSQNPDDISMSKFVFDYAGYKRVARLDTGLAYEKDFDACVKEFSTLFEFEVTE LEGTLHLIENCYAKTKASVFEACPRSQA >Mature_267_residues PVITILGCRMFEDEIMHLLENDPEIEEVLVVENEDCVGIMKKMAEAGLAYTALSPEKIPEKSSETGKGLTLIVYMLELAL HAIPENLKKTVYSKVELMSSCSDGILLFYGLCGNVLGKIEEDFKDLGCQVCILKEENGEIVDDCIGAVLGGRKQYLEVLK SCRGVGTFFLTPMWAVNWREMIRTSGLSQNPDDISMSKFVFDYAGYKRVARLDTGLAYEKDFDACVKEFSTLFEFEVTEL EGTLHLIENCYAKTKASVFEACPRSQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29942; Mature: 29811
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVITILGCRMFEDEIMHLLENDPEIEEVLVVENEDCVGIMKKMAEAGLAYTALSPEKIP CCEEEEHHHHHHHHHHHHHHCCCCCHHHEEEECCCCHHHHHHHHHHCCCEEEECCHHHCC EKSSETGKGLTLIVYMLELALHAIPENLKKTVYSKVELMSSCSDGILLFYGLCGNVLGKI CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH EEDFKDLGCQVCILKEENGEIVDDCIGAVLGGRKQYLEVLKSCRGVGTFFLTPMWAVNWR HHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH EMIRTSGLSQNPDDISMSKFVFDYAGYKRVARLDTGLAYEKDFDACVKEFSTLFEFEVTE HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH LEGTLHLIENCYAKTKASVFEACPRSQA HHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PVITILGCRMFEDEIMHLLENDPEIEEVLVVENEDCVGIMKKMAEAGLAYTALSPEKIP CEEEEHHHHHHHHHHHHHHCCCCCHHHEEEECCCCHHHHHHHHHHCCCEEEECCHHHCC EKSSETGKGLTLIVYMLELALHAIPENLKKTVYSKVELMSSCSDGILLFYGLCGNVLGKI CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH EEDFKDLGCQVCILKEENGEIVDDCIGAVLGGRKQYLEVLKSCRGVGTFFLTPMWAVNWR HHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH EMIRTSGLSQNPDDISMSKFVFDYAGYKRVARLDTGLAYEKDFDACVKEFSTLFEFEVTE HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH LEGTLHLIENCYAKTKASVFEACPRSQA HHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA