Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226683
Identifier: 21226683
GI number: 21226683
Start: 708693
End: 709691
Strand: Reverse
Name: 21226683
Synonym: MM_0581
Alternate gene names: NA
Gene position: 709691-708693 (Counterclockwise)
Preceding gene: 21226690
Following gene: 21226682
Centisome position: 17.32
GC content: 43.94
Gene sequence:
>999_bases ATGCAAAAAACACCCGAAAACAATTCTAAGTCAACGGTAAGTTCTGAGCTTGCAGAAACTCTGCTCCTTGAGGGATGGAA AAAAGTAGACCTGCATGTTCACTCGTCCTGTTCCTATGACGTCCCTCCGGCACAGGCAATGCACCCCGCAGTTCTTTTTG AAAAAGCGAAGTCTAAGGGGCTTGATTTTGTGACCTTTACAGATCATGATACTGTTGAAGCATATGATCTGCTGGGGTGG GATAAGGAGGGTCTTGTCCCAGGCGTTGAGATTTCAATCAAAGACCCTGAAAATGTAGGGCATACTATTCACGTTAATGT TTTTGAGCTTGACCCGGAAGAGTTCGGAGAACTTGAGGCTATCGCCAACCAGGAACATGATTTCAAAAGCTTTATTCGTT ACCTCAGAGCTCACAATCTTCCGCACGTATACAACCATCCTTTCTGGTTTGCTCCAGGAGACCGACCCAATCTCCGGCCT GTGCCTGAACTAATAAAACAGTTTCCTGTAGTAGAGTATAACATGCAGGACTTAACGGAAAAAAACCTCATTACGGCTGC ACTTGCTCGAAAATATGGGAAAGGGCTTGCCGCCACCACGGACAGCCATACAGGCGGCATGGGAGCAGTCTACACTCTTG CAAAAGGGGATTCTTTCAGGGAATATTTTGATAATATCAAAAATGGTCGGTCATATATAGTAGTTGAAGGAGGAGCCCTG AGACACCTTACTAAGGAGCTGAACGCCTGGGTTGAACTGGTTTTCTCTATGGATAGAAATGCGCGGGAAGAAAAAAGTTT TACCACCAATGTAAGGACATTTGACAGGCTGATAGCTCTCTTTGCAAATGAAAGAATTAGAAAATTTCCCAGAGTTAACA GTCTGACAATGAGCTTTTTTCAGAACTTTTCCAGATCCGGGCTGCCCGCTTATATGTATATGAGGTCTGAAAAGCCTCTT GTTTCTAGAATTGAAAAAATCGTTAATCTGACAGTGTAA
Upstream 100 bases:
>100_bases CGAAATCTCTTTATATTTTTGTCTCCATTCTTTTCACTGGATAAGAATTTTTCTAGAAAATTTCGTACAAAAGAGCGGAA TAAAATGGTCGTGTTTGTTA
Downstream 100 bases:
>100_bases GCTATTACCAAATTAAATCTCCTGAAAATAAGGTATGGAAACTGGTCAAGACCTATCTGACTAAAGCTATCTGATTAAAG TATTGAGCTAAAACCCTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MQKTPENNSKSTVSSELAETLLLEGWKKVDLHVHSSCSYDVPPAQAMHPAVLFEKAKSKGLDFVTFTDHDTVEAYDLLGW DKEGLVPGVEISIKDPENVGHTIHVNVFELDPEEFGELEAIANQEHDFKSFIRYLRAHNLPHVYNHPFWFAPGDRPNLRP VPELIKQFPVVEYNMQDLTEKNLITAALARKYGKGLAATTDSHTGGMGAVYTLAKGDSFREYFDNIKNGRSYIVVEGGAL RHLTKELNAWVELVFSMDRNAREEKSFTTNVRTFDRLIALFANERIRKFPRVNSLTMSFFQNFSRSGLPAYMYMRSEKPL VSRIEKIVNLTV
Sequences:
>Translated_332_residues MQKTPENNSKSTVSSELAETLLLEGWKKVDLHVHSSCSYDVPPAQAMHPAVLFEKAKSKGLDFVTFTDHDTVEAYDLLGW DKEGLVPGVEISIKDPENVGHTIHVNVFELDPEEFGELEAIANQEHDFKSFIRYLRAHNLPHVYNHPFWFAPGDRPNLRP VPELIKQFPVVEYNMQDLTEKNLITAALARKYGKGLAATTDSHTGGMGAVYTLAKGDSFREYFDNIKNGRSYIVVEGGAL RHLTKELNAWVELVFSMDRNAREEKSFTTNVRTFDRLIALFANERIRKFPRVNSLTMSFFQNFSRSGLPAYMYMRSEKPL VSRIEKIVNLTV >Mature_332_residues MQKTPENNSKSTVSSELAETLLLEGWKKVDLHVHSSCSYDVPPAQAMHPAVLFEKAKSKGLDFVTFTDHDTVEAYDLLGW DKEGLVPGVEISIKDPENVGHTIHVNVFELDPEEFGELEAIANQEHDFKSFIRYLRAHNLPHVYNHPFWFAPGDRPNLRP VPELIKQFPVVEYNMQDLTEKNLITAALARKYGKGLAATTDSHTGGMGAVYTLAKGDSFREYFDNIKNGRSYIVVEGGAL RHLTKELNAWVELVFSMDRNAREEKSFTTNVRTFDRLIALFANERIRKFPRVNSLTMSFFQNFSRSGLPAYMYMRSEKPL VSRIEKIVNLTV
Specific function: Unknown
COG id: COG0613
COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37801; Mature: 37801
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKTPENNSKSTVSSELAETLLLEGWKKVDLHVHSSCSYDVPPAQAMHPAVLFEKAKSKG CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCC LDFVTFTDHDTVEAYDLLGWDKEGLVPGVEISIKDPENVGHTIHVNVFELDPEEFGELEA CEEEEECCCCCHHHHHHCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEECHHHHHHHHH IANQEHDFKSFIRYLRAHNLPHVYNHPFWFAPGDRPNLRPVPELIKQFPVVEYNMQDLTE HHCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCHHHHHHHHCCCEEECHHHHHH KNLITAALARKYGKGLAATTDSHTGGMGAVYTLAKGDSFREYFDNIKNGRSYIVVEGGAL HHHHHHHHHHHHCCCCEECCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEECCCHH RHLTKELNAWVELVFSMDRNAREEKSFTTNVRTFDRLIALFANERIRKFPRVNSLTMSFF HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH QNFSRSGLPAYMYMRSEKPLVSRIEKIVNLTV HHHCCCCCCEEEEEECCCHHHHHHHHHHHCCC >Mature Secondary Structure MQKTPENNSKSTVSSELAETLLLEGWKKVDLHVHSSCSYDVPPAQAMHPAVLFEKAKSKG CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCC LDFVTFTDHDTVEAYDLLGWDKEGLVPGVEISIKDPENVGHTIHVNVFELDPEEFGELEA CEEEEECCCCCHHHHHHCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEECHHHHHHHHH IANQEHDFKSFIRYLRAHNLPHVYNHPFWFAPGDRPNLRPVPELIKQFPVVEYNMQDLTE HHCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCHHHHHHHHCCCEEECHHHHHH KNLITAALARKYGKGLAATTDSHTGGMGAVYTLAKGDSFREYFDNIKNGRSYIVVEGGAL HHHHHHHHHHHHCCCCEECCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEECCCHH RHLTKELNAWVELVFSMDRNAREEKSFTTNVRTFDRLIALFANERIRKFPRVNSLTMSFF HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH QNFSRSGLPAYMYMRSEKPLVSRIEKIVNLTV HHHCCCCCCEEEEEECCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA