Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226682
Identifier: 21226682
GI number: 21226682
Start: 707646
End: 708299
Strand: Reverse
Name: 21226682
Synonym: MM_0580
Alternate gene names: NA
Gene position: 708299-707646 (Counterclockwise)
Preceding gene: 21226683
Following gene: 21226681
Centisome position: 17.29
GC content: 38.84
Gene sequence:
>654_bases ATGCTCCAAAATGGAAAAATTAAAGGTTTAATATTTGACTGTTATAAAACTCTCATTGATATTAGAACTGATGAGGGAAG CTGGGAAACAAACGAAAAAGTAAGCAAATGGTTACTCTATCAGGGAGTAAGAATCGAACCTGATAGGCTCAGAGAAGAAT ACAAGTGGAAGGTAATAGGTAGACTGGGCAACTCCGGGCAGAAATACCCTGATATCCGTATAGAAGAAATTTTTGCCGAA ATTTGTGCAGAAAATGCTTTTAGAGAAATCAACCCATTCTGGCTCGGTATTGAAGCTGCAAAGGTTTTCAGGACTTCATC TTTAAAGAAACTTGAGGCTTACCCCCAGAGCCTTCGTCTGCTTGATAAATATCGGAACGTTCCTAAATGCATTGTTTCAA ATGCTCAGAGAGTTTTTACTGAACAGGAACTCCACTTCCTGGGATTATATGATCGTTTTAATTTTATTATCATGTCCTCA GACCACAGAATTAAAAAACCTGATACAAGGCTTTTCAAAATGGCTCTCGATGGTCTTAAACTGGAACCCTGGGAAGTGTT ATCAATTGGAGACACTCCGGAAAATGATATCTACGCCCCTCAAAGTCTTGGAATTAATGCAATGCATATCCGTGATGCCT GGAGATGTGTATAA
Upstream 100 bases:
>100_bases GCAAAATCTATATACTTAAGGGCTGATCTTTGTAGTAATGTAAGTTTCTTACATGCAAAAGTAACATCCATAAAATTTAA AAATAATATGGAGAATTTCC
Downstream 100 bases:
>100_bases TTTATTGCATAGCTCATTTCTTAAAATCTGAATGCCATAGTACTTACAAAATTGAAATATGAATAATAAATATTGACACT GGAGCAGTAGCCTGGATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: HAD Family Hydrolase; Haloacid Dehalogenase; HAD-Superfamily Hydrolase / Phosphatase; Halo Acid Dehalogenase-Like Hydrolase; HAD Superfamily Hydrolase; HAD-Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase Family Protein; Haloacid Dehalogenase Domain Protein Hydrolase
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MLQNGKIKGLIFDCYKTLIDIRTDEGSWETNEKVSKWLLYQGVRIEPDRLREEYKWKVIGRLGNSGQKYPDIRIEEIFAE ICAENAFREINPFWLGIEAAKVFRTSSLKKLEAYPQSLRLLDKYRNVPKCIVSNAQRVFTEQELHFLGLYDRFNFIIMSS DHRIKKPDTRLFKMALDGLKLEPWEVLSIGDTPENDIYAPQSLGINAMHIRDAWRCV
Sequences:
>Translated_217_residues MLQNGKIKGLIFDCYKTLIDIRTDEGSWETNEKVSKWLLYQGVRIEPDRLREEYKWKVIGRLGNSGQKYPDIRIEEIFAE ICAENAFREINPFWLGIEAAKVFRTSSLKKLEAYPQSLRLLDKYRNVPKCIVSNAQRVFTEQELHFLGLYDRFNFIIMSS DHRIKKPDTRLFKMALDGLKLEPWEVLSIGDTPENDIYAPQSLGINAMHIRDAWRCV >Mature_217_residues MLQNGKIKGLIFDCYKTLIDIRTDEGSWETNEKVSKWLLYQGVRIEPDRLREEYKWKVIGRLGNSGQKYPDIRIEEIFAE ICAENAFREINPFWLGIEAAKVFRTSSLKKLEAYPQSLRLLDKYRNVPKCIVSNAQRVFTEQELHFLGLYDRFNFIIMSS DHRIKKPDTRLFKMALDGLKLEPWEVLSIGDTPENDIYAPQSLGINAMHIRDAWRCV
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25449; Mature: 25449
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQNGKIKGLIFDCYKTLIDIRTDEGSWETNEKVSKWLLYQGVRIEPDRLREEYKWKVIG CCCCCCCCHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHEEE RLGNSGQKYPDIRIEEIFAEICAENAFREINPFWLGIEAAKVFRTSSLKKLEAYPQSLRL ECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH LDKYRNVPKCIVSNAQRVFTEQELHFLGLYDRFNFIIMSSDHRIKKPDTRLFKMALDGLK HHHHCCCHHHHHHHHHHHHHHHHHHEEEEECCEEEEEECCCCCCCCCHHHHHHHHHCCCC LEPWEVLSIGDTPENDIYAPQSLGINAMHIRDAWRCV CCCEEEEECCCCCCCCCCCCHHCCCEEEEECHHHHCC >Mature Secondary Structure MLQNGKIKGLIFDCYKTLIDIRTDEGSWETNEKVSKWLLYQGVRIEPDRLREEYKWKVIG CCCCCCCCHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHEEE RLGNSGQKYPDIRIEEIFAEICAENAFREINPFWLGIEAAKVFRTSSLKKLEAYPQSLRL ECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH LDKYRNVPKCIVSNAQRVFTEQELHFLGLYDRFNFIIMSSDHRIKKPDTRLFKMALDGLK HHHHCCCHHHHHHHHHHHHHHHHHHEEEEECCEEEEEECCCCCCCCCHHHHHHHHHCCCC LEPWEVLSIGDTPENDIYAPQSLGINAMHIRDAWRCV CCCEEEEECCCCCCCCCCCCHHCCCEEEEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA