Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226690
Identifier: 21226690
GI number: 21226690
Start: 718915
End: 719550
Strand: Reverse
Name: 21226690
Synonym: MM_0588
Alternate gene names: NA
Gene position: 719550-718915 (Counterclockwise)
Preceding gene: 21226691
Following gene: 21226683
Centisome position: 17.57
GC content: 46.07
Gene sequence:
>636_bases GTGCCTGAACATGAAATGAACCAGGTCCCCCCCTATGAATTTTATACCCAAAAGCGCTGGGAAAACTGGCTCGGACGGGC AAAGGAAAGCGGTTTTCAGATCAAAGAGTCTGAAGAAGAAGCCAGCAAGGAAAGTGCTGTATTCGTTAATATGGTAGATG ATGTAATTCTTGCCTGCCTGAAAGTGACCGCACGCTTTGAAAAGGAGATGCTCTCCAAAGAAATGACTTTACATATTCTT GAGGAGATCAGAGATATCGTTCTTGCCGAGGTCGAACCTATTTCCGAGGATATTGACCTTATGATTGATTCGGTACAGAC CTCTTTAATGGGCGCGCTCGTCGCCTTTGAATGCTATGCCATGGGCGACTACGAGGAAGGAGCAGATATCAATGAGCTTA TAAAAGCAGCAATTGATGCCGAAGCCTCGGATAACCTTGAACTCGCTCTTGATTACACTGCACAGTGCGGTGCAATCGTG CTCAAAGGGCAGACCCTGCCGGAAGAGGTAATGGCTGATCTTCCATACGGAATTGTTGCAGAATGGCTTGACGGGATTGA TTCTATCTCAGCAGCAATGGTAGGCAGCGACAGTTATAAAGAATTCGATGAAGATGATGAGGACGATGCAATATAA
Upstream 100 bases:
>100_bases CCTTGAAAAAGGTAAAGCTTGCATGGTGAACATAAACAAACACCTTTTAGTAATAGTAAGACTGATTATTAATAAAAAAG GTTTATAAGCGGTGTTAAAA
Downstream 100 bases:
>100_bases CTTCTTTCTTTACACCACATCTTCCTCTTACACTTTTCTTCAAACATTTTAAATCTTTTTTCAATTACTTATATTAAATA TTCCAGATTTAAAATGCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MPEHEMNQVPPYEFYTQKRWENWLGRAKESGFQIKESEEEASKESAVFVNMVDDVILACLKVTARFEKEMLSKEMTLHIL EEIRDIVLAEVEPISEDIDLMIDSVQTSLMGALVAFECYAMGDYEEGADINELIKAAIDAEASDNLELALDYTAQCGAIV LKGQTLPEEVMADLPYGIVAEWLDGIDSISAAMVGSDSYKEFDEDDEDDAI
Sequences:
>Translated_211_residues MPEHEMNQVPPYEFYTQKRWENWLGRAKESGFQIKESEEEASKESAVFVNMVDDVILACLKVTARFEKEMLSKEMTLHIL EEIRDIVLAEVEPISEDIDLMIDSVQTSLMGALVAFECYAMGDYEEGADINELIKAAIDAEASDNLELALDYTAQCGAIV LKGQTLPEEVMADLPYGIVAEWLDGIDSISAAMVGSDSYKEFDEDDEDDAI >Mature_210_residues PEHEMNQVPPYEFYTQKRWENWLGRAKESGFQIKESEEEASKESAVFVNMVDDVILACLKVTARFEKEMLSKEMTLHILE EIRDIVLAEVEPISEDIDLMIDSVQTSLMGALVAFECYAMGDYEEGADINELIKAAIDAEASDNLELALDYTAQCGAIVL KGQTLPEEVMADLPYGIVAEWLDGIDSISAAMVGSDSYKEFDEDDEDDAI
Specific function: Unknown
COG id: COG4749
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23610; Mature: 23478
Theoretical pI: Translated: 3.71; Mature: 3.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEHEMNQVPPYEFYTQKRWENWLGRAKESGFQIKESEEEASKESAVFVNMVDDVILACL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH KVTARFEKEMLSKEMTLHILEEIRDIVLAEVEPISEDIDLMIDSVQTSLMGALVAFECYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MGDYEEGADINELIKAAIDAEASDNLELALDYTAQCGAIVLKGQTLPEEVMADLPYGIVA CCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHCCHHHHH EWLDGIDSISAAMVGSDSYKEFDEDDEDDAI HHHHHHHHHHHHHHCCCHHHHCCCCCCCCCC >Mature Secondary Structure PEHEMNQVPPYEFYTQKRWENWLGRAKESGFQIKESEEEASKESAVFVNMVDDVILACL CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH KVTARFEKEMLSKEMTLHILEEIRDIVLAEVEPISEDIDLMIDSVQTSLMGALVAFECYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MGDYEEGADINELIKAAIDAEASDNLELALDYTAQCGAIVLKGQTLPEEVMADLPYGIVA CCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHCCHHHHH EWLDGIDSISAAMVGSDSYKEFDEDDEDDAI HHHHHHHHHHHHHHCCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA