Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226649
Identifier: 21226649
GI number: 21226649
Start: 675845
End: 676567
Strand: Direct
Name: 21226649
Synonym: MM_0547
Alternate gene names: NA
Gene position: 675845-676567 (Clockwise)
Preceding gene: 21226648
Following gene: 21226650
Centisome position: 16.5
GC content: 49.65
Gene sequence:
>723_bases ATGCGAATCTATAAAATCATCTTTTTTGTCACAGCGGTTTCGCAGATTTTCAGCATTTTTTTCTCGTCTTTTAGCGGAGG CAGTAATTTCAATGAACTGCTCATCACCCCAGCCGGGTATACTTTTGCCATTTGGGGAGTGATAACCATGTTTTCAAGCA TCTACGCGCTGCTGCATCTCTTTGGCACACGGACATTTTCAAGGCCGGTGTATCTCTGGCTCTCGTCGGTATACGTCTGT TTTACCCTCTGGCTCATGGCGGCTGAGCGGGAATTGCTGCTGTTGACGGTGCTCATTTTCCTCTTTATGTACTTCGCTTT GCTCAAGGCGTTTCCCCAACTATTGGAACAGGGTTTTGCGAATATCCAGGAGAAGCTATTCCTGCAGGGCGGAGTCGGGA TGTATCTGGGGTGGTCAAGCGTTGCGGTGCTAGCTAATATCGGCGTGTATGCTTTTTCCTTTGGCATCCAGAGTAGCTCC CAGCTCGGAATCTATCTTCAAATGCTCCTCGTGCTTCTCGCGGCGCTCTCTGCGGGCTACGCACTCTATCAAAGCAAGCG CAACGCCGTGGTGTTCGCCACCCACTGGTGGGCCTTTGTCGGGATTCTCGTGGGACTTTTTTCTAGGGAGCAGACCGAAC TCCTGATCGCCTGGACGCTCGTCTGCGTTGTCGGACTGAACGTGTTTTATTTCAAAAAGCGGTTGAGATCTATAAAAAAT TAA
Upstream 100 bases:
>100_bases CCAAAATGCTGATTGAAATTTACGGGCAAAAAACTCAAAAGAACATCGCCAAACTTTGGGCAGAATAATTAAAATGCTAT GAACATCCAACCATAACAAT
Downstream 100 bases:
>100_bases CAATTGAATAAACCAAAAACAAAAACCATTATTATCGCCATTATTTCCTTTTTTGTAGTTCCCCTGGTAGGTTTGTGGCT CTTCGCTGTTTTGTGTGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MRIYKIIFFVTAVSQIFSIFFSSFSGGSNFNELLITPAGYTFAIWGVITMFSSIYALLHLFGTRTFSRPVYLWLSSVYVC FTLWLMAAERELLLLTVLIFLFMYFALLKAFPQLLEQGFANIQEKLFLQGGVGMYLGWSSVAVLANIGVYAFSFGIQSSS QLGIYLQMLLVLLAALSAGYALYQSKRNAVVFATHWWAFVGILVGLFSREQTELLIAWTLVCVVGLNVFYFKKRLRSIKN
Sequences:
>Translated_240_residues MRIYKIIFFVTAVSQIFSIFFSSFSGGSNFNELLITPAGYTFAIWGVITMFSSIYALLHLFGTRTFSRPVYLWLSSVYVC FTLWLMAAERELLLLTVLIFLFMYFALLKAFPQLLEQGFANIQEKLFLQGGVGMYLGWSSVAVLANIGVYAFSFGIQSSS QLGIYLQMLLVLLAALSAGYALYQSKRNAVVFATHWWAFVGILVGLFSREQTELLIAWTLVCVVGLNVFYFKKRLRSIKN >Mature_240_residues MRIYKIIFFVTAVSQIFSIFFSSFSGGSNFNELLITPAGYTFAIWGVITMFSSIYALLHLFGTRTFSRPVYLWLSSVYVC FTLWLMAAERELLLLTVLIFLFMYFALLKAFPQLLEQGFANIQEKLFLQGGVGMYLGWSSVAVLANIGVYAFSFGIQSSS QLGIYLQMLLVLLAALSAGYALYQSKRNAVVFATHWWAFVGILVGLFSREQTELLIAWTLVCVVGLNVFYFKKRLRSIKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27188; Mature: 27188
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIYKIIFFVTAVSQIFSIFFSSFSGGSNFNELLITPAGYTFAIWGVITMFSSIYALLHL CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH FGTRTFSRPVYLWLSSVYVCFTLWLMAAERELLLLTVLIFLFMYFALLKAFPQLLEQGFA HHCHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIQEKLFLQGGVGMYLGWSSVAVLANIGVYAFSFGIQSSSQLGIYLQMLLVLLAALSAGY HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH ALYQSKRNAVVFATHWWAFVGILVGLFSREQTELLIAWTLVCVVGLNVFYFKKRLRSIKN HHHHCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRIYKIIFFVTAVSQIFSIFFSSFSGGSNFNELLITPAGYTFAIWGVITMFSSIYALLHL CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH FGTRTFSRPVYLWLSSVYVCFTLWLMAAERELLLLTVLIFLFMYFALLKAFPQLLEQGFA HHCHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIQEKLFLQGGVGMYLGWSSVAVLANIGVYAFSFGIQSSSQLGIYLQMLLVLLAALSAGY HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH ALYQSKRNAVVFATHWWAFVGILVGLFSREQTELLIAWTLVCVVGLNVFYFKKRLRSIKN HHHHCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA