Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226650
Identifier: 21226650
GI number: 21226650
Start: 676642
End: 676866
Strand: Direct
Name: 21226650
Synonym: MM_0548
Alternate gene names: NA
Gene position: 676642-676866 (Clockwise)
Preceding gene: 21226649
Following gene: 21226655
Centisome position: 16.52
GC content: 36.89
Gene sequence:
>225_bases GTGGCTCTTCGCTGTTTTGTGTGGGTTGAAAATAATTGCCTGGTTAAAAGGTGTTCAGATCAAATTGAGAACATCAAGCT TGAATGTGATTTTCAACAACATCTGTTCCTATATTTTGTGCATGCTACTTCTACACCAGGAAAATTTAAGTTAACCATTC GAAACATTGAAGAGCCGTTTTGGAGCAACTATCAGATTCAGGTCACGTTTCAATCCTTATTTTAG
Upstream 100 bases:
>100_bases AGCGGTTGAGATCTATAAAAAATTAACAATTGAATAAACCAAAAACAAAAACCATTATTATCGCCATTATTTCCTTTTTT GTAGTTCCCCTGGTAGGTTT
Downstream 100 bases:
>100_bases TGGATCTTGCTAGCGAATTATTACTTGTACTCTGTAAATCTCTTTGATTCGAGGTTATAGTATTTTTTCCGTATGTCGAA TTATCCATTCTTTTATTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 74; Mature: 73
Protein sequence:
>74_residues MALRCFVWVENNCLVKRCSDQIENIKLECDFQQHLFLYFVHATSTPGKFKLTIRNIEEPFWSNYQIQVTFQSLF
Sequences:
>Translated_74_residues MALRCFVWVENNCLVKRCSDQIENIKLECDFQQHLFLYFVHATSTPGKFKLTIRNIEEPFWSNYQIQVTFQSLF >Mature_73_residues ALRCFVWVENNCLVKRCSDQIENIKLECDFQQHLFLYFVHATSTPGKFKLTIRNIEEPFWSNYQIQVTFQSLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8908; Mature: 8777
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALRCFVWVENNCLVKRCSDQIENIKLECDFQQHLFLYFVHATSTPGKFKLTIRNIEEPF CEEEEEEEECCCEEEECCCCHHHCEEEEECCCCCEEEEEEEECCCCCEEEEEEECCCCCC WSNYQIQVTFQSLF CCCEEEEEEEEECC >Mature Secondary Structure ALRCFVWVENNCLVKRCSDQIENIKLECDFQQHLFLYFVHATSTPGKFKLTIRNIEEPF EEEEEEEECCCEEEECCCCHHHCEEEEECCCCCEEEEEEEECCCCCEEEEEEECCCCCC WSNYQIQVTFQSLF CCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA