Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226648
Identifier: 21226648
GI number: 21226648
Start: 674890
End: 675240
Strand: Direct
Name: 21226648
Synonym: MM_0546
Alternate gene names: NA
Gene position: 674890-675240 (Clockwise)
Preceding gene: 21226647
Following gene: 21226649
Centisome position: 16.48
GC content: 35.04
Gene sequence:
>351_bases ATGAAGCGTGTAAGTGTAAGATTAACTCCCGAAGCTGATGAGGCATACGAATATCTGATAAGTAAGGCTTCGGACTCAAA GCAGGAAGAGACAATTCTTAATGCTTTTCATCAGAAAATAGAGTTAATAAAAAACGATGTTCATTATGGAAATCCAGTTG CTAAAAGATTAATTCCTTCAGAATATAAAACCAAATATGGAGTAAATAACCTGTTTAGAGTGGAACTCCCAGGCTTCTGG AGAATGCTTTACACACTTACAGCTGGTAATTCGGGCGTTGAAACTCTCGTAATAGTGATTGATATAATCGATCATAAAAA ATACGATAAAGCATTTGGTTACAAGAAGTAA
Upstream 100 bases:
>100_bases AATAGCTGTTGGGTTAAGAGGGATAACCTGGATTCACAACACAAATCATAATTTAAGGAATGTTGCGATTTACGGGCGCG AGCTATAAAACGTGAATGGC
Downstream 100 bases:
>100_bases GTTTTTCCTTTTCTGCCGTCCTTCGGATCCGCTCCATGAAGACCCATAGCAGGGTAAAGCCACAAGGAAAAAAAGGTTCC TTATTTGGGCTCTGACCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MKRVSVRLTPEADEAYEYLISKASDSKQEETILNAFHQKIELIKNDVHYGNPVAKRLIPSEYKTKYGVNNLFRVELPGFW RMLYTLTAGNSGVETLVIVIDIIDHKKYDKAFGYKK
Sequences:
>Translated_116_residues MKRVSVRLTPEADEAYEYLISKASDSKQEETILNAFHQKIELIKNDVHYGNPVAKRLIPSEYKTKYGVNNLFRVELPGFW RMLYTLTAGNSGVETLVIVIDIIDHKKYDKAFGYKK >Mature_116_residues MKRVSVRLTPEADEAYEYLISKASDSKQEETILNAFHQKIELIKNDVHYGNPVAKRLIPSEYKTKYGVNNLFRVELPGFW RMLYTLTAGNSGVETLVIVIDIIDHKKYDKAFGYKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13413; Mature: 13413
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRVSVRLTPEADEAYEYLISKASDSKQEETILNAFHQKIELIKNDVHYGNPVAKRLIPS CCCEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCC EYKTKYGVNNLFRVELPGFWRMLYTLTAGNSGVETLVIVIDIIDHKKYDKAFGYKK HHHHHCCCCCEEEEECCHHHHHHHHHCCCCCCCEEEEHEEEHHCCCCHHHHCCCCC >Mature Secondary Structure MKRVSVRLTPEADEAYEYLISKASDSKQEETILNAFHQKIELIKNDVHYGNPVAKRLIPS CCCEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCC EYKTKYGVNNLFRVELPGFWRMLYTLTAGNSGVETLVIVIDIIDHKKYDKAFGYKK HHHHHCCCCCEEEEECCHHHHHHHHHCCCCCCCEEEEHEEEHHCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA