| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21226537
Identifier: 21226537
GI number: 21226537
Start: 554902
End: 555309
Strand: Reverse
Name: 21226537
Synonym: MM_0435
Alternate gene names: NA
Gene position: 555309-554902 (Counterclockwise)
Preceding gene: 21226538
Following gene: 21226530
Centisome position: 13.56
GC content: 40.44
Gene sequence:
>408_bases ATGAGAATAAGAGTGGTTAGTTCAAGGGAAGAAATTTTTACACTTAATCCGAATGAGCGTATTGTTCACCTGGCTTTCAG GCCGTCTAATAAGGACATCTTCGGACTGGTTGAAACCTGCCCGAAGATTGAGGTAATCCAGTTACCCAAATCCTATATGC GGACGGTTTCAAAGTCCATAGAGATGTTCCTTCAGATGCAGAGGATCCAGCTCCTTGAAGGGGATGTCTGGGGACACAGG AAAGATATAAACGAATACTATGCAATTCCGTCTTCAGTGATCGATAAGATAAAAGAAATGAAGAATGAAGGAAAATCCAT TGAGGAAATTGAGAAAAAAGTTGCAAGGGAAAGTAAACTGAACCCTGAAATGGTCGCTTATATACTTAACAAGGAAGTTT CTAGCTGA
Upstream 100 bases:
>100_bases AAAAATAACTTAAAATAAAAGTAACTTAAATAAAAATAACTTAAATAAAAATAACTTAAATAAAAATAACTTAAACTATT TTTAGAGTGGGGGAAAAAAC
Downstream 100 bases:
>100_bases TTCCGTGCATTTAATTTTTCCTGGCTGGAGATTGGATTATAGAGATAATCGGTTCCACAAACTTTAACGATTCCACAATT ATTATCTAATCTCCAGTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MRIRVVSSREEIFTLNPNERIVHLAFRPSNKDIFGLVETCPKIEVIQLPKSYMRTVSKSIEMFLQMQRIQLLEGDVWGHR KDINEYYAIPSSVIDKIKEMKNEGKSIEEIEKKVARESKLNPEMVAYILNKEVSS
Sequences:
>Translated_135_residues MRIRVVSSREEIFTLNPNERIVHLAFRPSNKDIFGLVETCPKIEVIQLPKSYMRTVSKSIEMFLQMQRIQLLEGDVWGHR KDINEYYAIPSSVIDKIKEMKNEGKSIEEIEKKVARESKLNPEMVAYILNKEVSS >Mature_135_residues MRIRVVSSREEIFTLNPNERIVHLAFRPSNKDIFGLVETCPKIEVIQLPKSYMRTVSKSIEMFLQMQRIQLLEGDVWGHR KDINEYYAIPSSVIDKIKEMKNEGKSIEEIEKKVARESKLNPEMVAYILNKEVSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15770; Mature: 15770
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIRVVSSREEIFTLNPNERIVHLAFRPSNKDIFGLVETCPKIEVIQLPKSYMRTVSKSI CEEEEECCCCCEEEECCCCEEEEEEECCCCCCCHHHHHCCCCCEEEECCHHHHHHHHHHH EMFLQMQRIQLLEGDVWGHRKDINEYYAIPSSVIDKIKEMKNEGKSIEEIEKKVARESKL HHHHHHHHHHHHCCCCCCCHHCCHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC NPEMVAYILNKEVSS CHHHHHHHHHHHCCC >Mature Secondary Structure MRIRVVSSREEIFTLNPNERIVHLAFRPSNKDIFGLVETCPKIEVIQLPKSYMRTVSKSI CEEEEECCCCCEEEECCCCEEEEEEECCCCCCCHHHHHCCCCCEEEECCHHHHHHHHHHH EMFLQMQRIQLLEGDVWGHRKDINEYYAIPSSVIDKIKEMKNEGKSIEEIEKKVARESKL HHHHHHHHHHHHCCCCCCCHHCCHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC NPEMVAYILNKEVSS CHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA