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The map label for this gene is 21226530

Identifier: 21226530

GI number: 21226530

Start: 544639

End: 545658

Strand: Reverse

Name: 21226530

Synonym: MM_0428

Alternate gene names: NA

Gene position: 545658-544639 (Counterclockwise)

Preceding gene: 21226537

Following gene: 21226529

Centisome position: 13.32

GC content: 48.73

Gene sequence:

>1020_bases
GTGATTTCTAAAAAACTTATTGACCTTGGAGTGCTTGCGCTCAGGCAACGCAACTCGCGAGGTACTTTTAAACCCCACAT
TTCCATCCGTTTCCGGGACAATGCAGGAGATTTACGTACCTTTTCCATTGATACGACCCGGACTCCGGGAAAACACCCCC
AGCCCGATGCTTATCTCATCACACATGCTCACTCCGACCATCACGGAAAATCAGCCATGCTCTCCCCCAGGGCGGTCTGT
ACGGACAAAACGGCAGCAGCTCTTGAAATCAGGCACGACAAAAAATACGTGGGCAGCACATGCAGACTGGGAGATGAAAT
TGAAATCGAAGGGACAGTGGTAAAGACTTACCCGACGGAGCATACTGCCGGTGCAGCTGCTTTTTTTTGGGAGAACGATG
TAGGGACAAGAATTCTGGTCACAGGGGACGTTAAAGACGCCAGCAAGCTCCCTCCGTGTGATGTCCTTATCACCGAGGCT
AACTACGGCGATCCTGAAGACCCGTCGTGTCACTTTGCAGATGATCTTGACAGCATGAAATGCGCCCTCTTTGAGAGCGG
CCCCGTAGCCTTTGGAGCTTATGAGTTCGGAAAAGCACAGCGTGCGGTTGAACTGATGAGAGGCTTTGGATACAATGGAG
CGATCCGGATGGAAGCAAGGGTAAGAGCGCTTACCAGGAGCATGCTTGAGGACGCTGGAGAACTTGCAGGGCTTGAATCC
GAAGGAGATGATGAAGTTTTCGTTGTGGCTCCCTGGGAACTTGACAGGCTCCCATGGAACGTGAAAAAATATGTATTGAG
TTGCCGGGCAGATTATTCCTATCCGATTATTAAAATAAGCGACCACCTTGATGCCTGCGGGCTTGAGGCTATGGTCAGAA
AACTCAATCCCGAAGTCACGGTTGTTTACCACCCTGGAGGGCACAGACCCTCAAAATTTTCAAAACATTTAAATTCTATA
GGGATCGATTCGATATCAATAGATCAGATCGGTAATGTTTTAAGCAATGAATTTATTTAA

Upstream 100 bases:

>100_bases
ATACATCCTCTTTTATTTTTTGTAATAGGTAGTATAATTACGAGTTTATTTGCTTTCCCTAAGCTTAAATAACTTAAGTG
TAATCTCCTCAGGGATTGGC

Downstream 100 bases:

>100_bases
GTCGCTGAAACTCAGTCCTAAAAATTTAATTCTAAAAATTTAAATATGATGATCTAAATCTGATGATCTAAATCTGGTAA
TCCGGTTTTAACCTTTTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: RNA Procession Exonuclease-Like Protein; Metallo-Hydrolase/Oxidoreductase; Exonuclease Protein Involved In MRNA Processing; MRNA Processing Exonuclease; Beta-Lactamase Domain Protein; Exonuclease

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MISKKLIDLGVLALRQRNSRGTFKPHISIRFRDNAGDLRTFSIDTTRTPGKHPQPDAYLITHAHSDHHGKSAMLSPRAVC
TDKTAAALEIRHDKKYVGSTCRLGDEIEIEGTVVKTYPTEHTAGAAAFFWENDVGTRILVTGDVKDASKLPPCDVLITEA
NYGDPEDPSCHFADDLDSMKCALFESGPVAFGAYEFGKAQRAVELMRGFGYNGAIRMEARVRALTRSMLEDAGELAGLES
EGDDEVFVVAPWELDRLPWNVKKYVLSCRADYSYPIIKISDHLDACGLEAMVRKLNPEVTVVYHPGGHRPSKFSKHLNSI
GIDSISIDQIGNVLSNEFI

Sequences:

>Translated_339_residues
MISKKLIDLGVLALRQRNSRGTFKPHISIRFRDNAGDLRTFSIDTTRTPGKHPQPDAYLITHAHSDHHGKSAMLSPRAVC
TDKTAAALEIRHDKKYVGSTCRLGDEIEIEGTVVKTYPTEHTAGAAAFFWENDVGTRILVTGDVKDASKLPPCDVLITEA
NYGDPEDPSCHFADDLDSMKCALFESGPVAFGAYEFGKAQRAVELMRGFGYNGAIRMEARVRALTRSMLEDAGELAGLES
EGDDEVFVVAPWELDRLPWNVKKYVLSCRADYSYPIIKISDHLDACGLEAMVRKLNPEVTVVYHPGGHRPSKFSKHLNSI
GIDSISIDQIGNVLSNEFI
>Mature_339_residues
MISKKLIDLGVLALRQRNSRGTFKPHISIRFRDNAGDLRTFSIDTTRTPGKHPQPDAYLITHAHSDHHGKSAMLSPRAVC
TDKTAAALEIRHDKKYVGSTCRLGDEIEIEGTVVKTYPTEHTAGAAAFFWENDVGTRILVTGDVKDASKLPPCDVLITEA
NYGDPEDPSCHFADDLDSMKCALFESGPVAFGAYEFGKAQRAVELMRGFGYNGAIRMEARVRALTRSMLEDAGELAGLES
EGDDEVFVVAPWELDRLPWNVKKYVLSCRADYSYPIIKISDHLDACGLEAMVRKLNPEVTVVYHPGGHRPSKFSKHLNSI
GIDSISIDQIGNVLSNEFI

Specific function: Unknown

COG id: COG1236

COG function: function code J; Predicted exonuclease of the beta-lactamase fold involved in RNA processing

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37435; Mature: 37435

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISKKLIDLGVLALRQRNSRGTFKPHISIRFRDNAGDLRTFSIDTTRTPGKHPQPDAYLI
CCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCEEEE
THAHSDHHGKSAMLSPRAVCTDKTAAALEIRHDKKYVGSTCRLGDEIEIEGTVVKTYPTE
EECCCCCCCCCCCCCCCCEECCCCEEEEEEECCHHHHCCHHCCCCEEEEEEEEEEECCCC
HTAGAAAFFWENDVGTRILVTGDVKDASKLPPCDVLITEANYGDPEDPSCHFADDLDSMK
CCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCE
CALFESGPVAFGAYEFGKAQRAVELMRGFGYNGAIRMEARVRALTRSMLEDAGELAGLES
EEEEECCCEEEEHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCC
EGDDEVFVVAPWELDRLPWNVKKYVLSCRADYSYPIIKISDHLDACGLEAMVRKLNPEVT
CCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHCCCCEE
VVYHPGGHRPSKFSKHLNSIGIDSISIDQIGNVLSNEFI
EEECCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHCCC
>Mature Secondary Structure
MISKKLIDLGVLALRQRNSRGTFKPHISIRFRDNAGDLRTFSIDTTRTPGKHPQPDAYLI
CCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCEEEE
THAHSDHHGKSAMLSPRAVCTDKTAAALEIRHDKKYVGSTCRLGDEIEIEGTVVKTYPTE
EECCCCCCCCCCCCCCCCEECCCCEEEEEEECCHHHHCCHHCCCCEEEEEEEEEEECCCC
HTAGAAAFFWENDVGTRILVTGDVKDASKLPPCDVLITEANYGDPEDPSCHFADDLDSMK
CCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCE
CALFESGPVAFGAYEFGKAQRAVELMRGFGYNGAIRMEARVRALTRSMLEDAGELAGLES
EEEEECCCEEEEHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCC
EGDDEVFVVAPWELDRLPWNVKKYVLSCRADYSYPIIKISDHLDACGLEAMVRKLNPEVT
CCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHCCCCEE
VVYHPGGHRPSKFSKHLNSIGIDSISIDQIGNVLSNEFI
EEECCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA