| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226525
Identifier: 21226525
GI number: 21226525
Start: 537162
End: 537590
Strand: Reverse
Name: 21226525
Synonym: MM_0423
Alternate gene names: NA
Gene position: 537590-537162 (Counterclockwise)
Preceding gene: 21226526
Following gene: 21226523
Centisome position: 13.12
GC content: 41.49
Gene sequence:
>429_bases ATGAGTGGGGACTATAATATGAAAATCAGAGTGGTTAGTTCACGGGAGGAAATTCCTACCCTTAATCCGAATGAGAAGGT TATCCACCTTGCTTTCAGGCCGTCTAACAAGGATGTATTCATGCTTGCTGAAACATGTCCTAAAATTGAAGCCATACAGC TTCCTAAATCTTACAGGAGGACGGTTTCAAAGTCAATAGAGATGTTCCTGGAGATGCAGAAGATAAATCTCCTGGAGGGG GATGTCTGGGGCCACCGAAAGGATATAAATGAATACTATAATGTCTCTCAGAATGTCCTGGAGAAAATTCAGGAGTTAAA AGCCGATCGGTTTTCAAATGAAATGATTGCCGAGAAGCTGTCAAGAGAAAGTAAGCTGAATTCGGATATGATTCTCTATA TCCTCGGCAGAAAAGGCGAAATATCCTGA
Upstream 100 bases:
>100_bases GACCCTCTAAATAATATTTCTGCTAATCGATACGTATATAAAATGTTAATGCGTAAACAAAATTTGATTTTTAAATAAAT AAAAATTTAATTCGTAAATA
Downstream 100 bases:
>100_bases AGTACGCATTTTTGCCTTTTCACAGCTCTCAGGGAAAAAGCCTTATTCTCTTCTGACCCGTAAAAGATGATTTGCTGAAA GGGCAGGTAACTTTTTAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MSGDYNMKIRVVSSREEIPTLNPNEKVIHLAFRPSNKDVFMLAETCPKIEAIQLPKSYRRTVSKSIEMFLEMQKINLLEG DVWGHRKDINEYYNVSQNVLEKIQELKADRFSNEMIAEKLSRESKLNSDMILYILGRKGEIS
Sequences:
>Translated_142_residues MSGDYNMKIRVVSSREEIPTLNPNEKVIHLAFRPSNKDVFMLAETCPKIEAIQLPKSYRRTVSKSIEMFLEMQKINLLEG DVWGHRKDINEYYNVSQNVLEKIQELKADRFSNEMIAEKLSRESKLNSDMILYILGRKGEIS >Mature_141_residues SGDYNMKIRVVSSREEIPTLNPNEKVIHLAFRPSNKDVFMLAETCPKIEAIQLPKSYRRTVSKSIEMFLEMQKINLLEGD VWGHRKDINEYYNVSQNVLEKIQELKADRFSNEMIAEKLSRESKLNSDMILYILGRKGEIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16554; Mature: 16423
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGDYNMKIRVVSSREEIPTLNPNEKVIHLAFRPSNKDVFMLAETCPKIEAIQLPKSYRR CCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCEEEECCHHHHH TVSKSIEMFLEMQKINLLEGDVWGHRKDINEYYNVSQNVLEKIQELKADRFSNEMIAEKL HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHH SRESKLNSDMILYILGRKGEIS HHHHCCCCCEEEEEECCCCCCC >Mature Secondary Structure SGDYNMKIRVVSSREEIPTLNPNEKVIHLAFRPSNKDVFMLAETCPKIEAIQLPKSYRR CCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCEEEECCHHHHH TVSKSIEMFLEMQKINLLEGDVWGHRKDINEYYNVSQNVLEKIQELKADRFSNEMIAEKL HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHH SRESKLNSDMILYILGRKGEIS HHHHCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA