| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is hisD
Identifier: 21226526
GI number: 21226526
Start: 537677
End: 538978
Strand: Reverse
Name: hisD
Synonym: MM_0424
Alternate gene names: 21226526
Gene position: 538978-537677 (Counterclockwise)
Preceding gene: 21226527
Following gene: 21226525
Centisome position: 13.16
GC content: 47.24
Gene sequence:
>1302_bases ATGATTATAATGTTATTCAAAAAGTTGTCTGATGTTTCGGAAGCTGAAATGCAGAGGTTAATTTCCCGGGGGTCCGGGCT TGCAGATGTTGGAGATACCGTATCAGCCGTACTTTCTGACGTGCGCATGAAAGGAGATGCTGCCCTCAGGGAGTATACAA AAAAGTTCGATAAAGTTGAACTTGCAAATTTTGAGGTAAGTGAAGAAGAGTTTGAAAAAGCTCTCTCCGAGATCGGTTCG GAACTGCTTGGACACCTTAGAATTGCAGCTGAAAATATTCGGGCTTTCCACAGGGCTCAGATGCCTGAAACTACCTGGTT TATGGAACTTCAGCCCGGGGTTGTCCTCGGGCAGAAGGCAACACCCCTTGAAAGTGTAGGGGCTTATGCTCCCGGAGGGA GGGCTTCCTATCCATCGACTGTATTGATGACAGTAATCCCTGCCAGGGTTGCAGGAGTTGAGCAGGTTATTGTGTGTACT CCTCCCAGGGCTGACGGTTCCGTACACCCTCTTACCCTTGCTGCTGCAAAGGTTGCAGGTGCGGATAAGGTTTTCAAGCT CGGGGGAGTGCAGGCAATAGGGGCTATGGCTTACGGGACTGAAACCGTTCCCAGGGTGGACAAAATTGTCGGTCCAGGAA ATGTTTTTGTGACCTCTGCCAAAATGCAGGTAAGGGATATTGCTGAGATTGATTTTCCGGCAGGTCCGAGTGAGGTCCTT ATCATAGCAGACGAGTCTGCAGATGCTGCTATGGCTGCTTCGGATATTATAGCCCAGGCAGAACATGACCCGAATGCGGT TTCCGTGCTTGTGACGACTTCGGAAACTCTTGCAGAAGAAGTGGAGCAGGAAGTGCTCGCCCAGGCCGAAAGTACTGCAA GGAGTGAAATTGTGAAAATTTCTCTTGAAAATGCAGCAGTTCTGATTGCAGACTCTCTTGATCAGTGCATTGACTTTAGC AATAAATTTGCACCTGAGCACCTTGAAATTATGGTGGAAGATTCCGATTTTGTGCTTGACAGAATTAAAAATGCAGGATC GATATTTATAGGGAACTATGCTCCTGTTCCTGTCGGAGACTACGCTTCCGGTACCAATCATGTGCTTCCTACGGCAGGGT ATGCGAAGATCTATTCCGGGCTGAACATAAATCACTTCCTCAAGTATTCCAGTATACAGAAAATCAGCAAGAGTGGGCTT GAAAGTTTGAAAGAAACTGTAATCGCATTAGCTGAGGAAGAAGGTTTGAAGGCACATGCTGACTCTATCAGGGCTCGTTT CGGATACAGACCCTCTAAATAA
Upstream 100 bases:
>100_bases GATTTAATGAGAGCAGATTATATCAGATTCTAAATTAGTACCGAATTTATTCAATCCGATCAGGATCAATTATATTCAGT TTTATTGGGTAATCTCAGAG
Downstream 100 bases:
>100_bases TATTTCTGCTAATCGATACGTATATAAAATGTTAATGCGTAAACAAAATTTGATTTTTAAATAAATAAAAATTTAATTCG TAAATAATGAGTGGGGACTA
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MIIMLFKKLSDVSEAEMQRLISRGSGLADVGDTVSAVLSDVRMKGDAALREYTKKFDKVELANFEVSEEEFEKALSEIGS ELLGHLRIAAENIRAFHRAQMPETTWFMELQPGVVLGQKATPLESVGAYAPGGRASYPSTVLMTVIPARVAGVEQVIVCT PPRADGSVHPLTLAAAKVAGADKVFKLGGVQAIGAMAYGTETVPRVDKIVGPGNVFVTSAKMQVRDIAEIDFPAGPSEVL IIADESADAAMAASDIIAQAEHDPNAVSVLVTTSETLAEEVEQEVLAQAESTARSEIVKISLENAAVLIADSLDQCIDFS NKFAPEHLEIMVEDSDFVLDRIKNAGSIFIGNYAPVPVGDYASGTNHVLPTAGYAKIYSGLNINHFLKYSSIQKISKSGL ESLKETVIALAEEEGLKAHADSIRARFGYRPSK
Sequences:
>Translated_433_residues MIIMLFKKLSDVSEAEMQRLISRGSGLADVGDTVSAVLSDVRMKGDAALREYTKKFDKVELANFEVSEEEFEKALSEIGS ELLGHLRIAAENIRAFHRAQMPETTWFMELQPGVVLGQKATPLESVGAYAPGGRASYPSTVLMTVIPARVAGVEQVIVCT PPRADGSVHPLTLAAAKVAGADKVFKLGGVQAIGAMAYGTETVPRVDKIVGPGNVFVTSAKMQVRDIAEIDFPAGPSEVL IIADESADAAMAASDIIAQAEHDPNAVSVLVTTSETLAEEVEQEVLAQAESTARSEIVKISLENAAVLIADSLDQCIDFS NKFAPEHLEIMVEDSDFVLDRIKNAGSIFIGNYAPVPVGDYASGTNHVLPTAGYAKIYSGLNINHFLKYSSIQKISKSGL ESLKETVIALAEEEGLKAHADSIRARFGYRPSK >Mature_433_residues MIIMLFKKLSDVSEAEMQRLISRGSGLADVGDTVSAVLSDVRMKGDAALREYTKKFDKVELANFEVSEEEFEKALSEIGS ELLGHLRIAAENIRAFHRAQMPETTWFMELQPGVVLGQKATPLESVGAYAPGGRASYPSTVLMTVIPARVAGVEQVIVCT PPRADGSVHPLTLAAAKVAGADKVFKLGGVQAIGAMAYGTETVPRVDKIVGPGNVFVTSAKMQVRDIAEIDFPAGPSEVL IIADESADAAMAASDIIAQAEHDPNAVSVLVTTSETLAEEVEQEVLAQAESTARSEIVKISLENAAVLIADSLDQCIDFS NKFAPEHLEIMVEDSDFVLDRIKNAGSIFIGNYAPVPVGDYASGTNHVLPTAGYAKIYSGLNINHFLKYSSIQKISKSGL ESLKETVIALAEEEGLKAHADSIRARFGYRPSK
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family
Homologues:
Organism=Escherichia coli, GI1788331, Length=432, Percent_Identity=42.5925925925926, Blast_Score=330, Evalue=7e-92, Organism=Saccharomyces cerevisiae, GI6319819, Length=421, Percent_Identity=42.5178147268409, Blast_Score=344, Evalue=2e-95,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HISX_METMA (Q8PZR8)
Other databases:
- EMBL: AE008384 - RefSeq: NP_632448.1 - ProteinModelPortal: Q8PZR8 - SMR: Q8PZR8 - GeneID: 1478766 - GenomeReviews: AE008384_GR - KEGG: mma:MM_0424 - NMPDR: fig|192952.1.peg.424 - HOGENOM: HBG329596 - OMA: YVLYVAK - ProtClustDB: PRK00877 - BioCyc: MMAZ192952:MM0424-MONOMER - BRENDA: 1.1.1.23 - HAMAP: MF_01024 - InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 - PANTHER: PTHR21256:SF2 - PIRSF: PIRSF000099 - PRINTS: PR00083 - TIGRFAMs: TIGR00069
Pfam domain/function: PF00815 Histidinol_dh; SSF53720 Aldehyde_DH/Histidinol_DH
EC number: =1.1.1.23
Molecular weight: Translated: 46324; Mature: 46324
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: ACT_SITE 326-326 ACT_SITE 327-327 BINDING 129-129 BINDING 191-191 BINDING 214-214 BINDING 237-237 BINDING 259-259 BINDING 262-262 BINDING 327-327 BINDING 360-360 BINDING 414-414 BINDING 419-419
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIMLFKKLSDVSEAEMQRLISRGSGLADVGDTVSAVLSDVRMKGDAALREYTKKFDKVE CEEEEEHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEE LANFEVSEEEFEKALSEIGSELLGHLRIAAENIRAFHRAQMPETTWFMELQPGVVLGQKA ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEECCCC TPLESVGAYAPGGRASYPSTVLMTVIPARVAGVEQVIVCTPPRADGSVHPLTLAAAKVAG CCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHCC ADKVFKLGGVQAIGAMAYGTETVPRVDKIVGPGNVFVTSAKMQVRDIAEIDFPAGPSEVL CCHHHHHCCHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCCCCEE IIADESADAAMAASDIIAQAEHDPNAVSVLVTTSETLAEEVEQEVLAQAESTARSEIVKI EEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHEEEE SLENAAVLIADSLDQCIDFSNKFAPEHLEIMVEDSDFVLDRIKNAGSIFIGNYAPVPVGD EECCCEEEEEHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHCCCCCEEECCCCCCCCCC YASGTNHVLPTAGYAKIYSGLNINHFLKYSSIQKISKSGLESLKETVIALAEEEGLKAHA CCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH DSIRARFGYRPSK HHHHHHCCCCCCC >Mature Secondary Structure MIIMLFKKLSDVSEAEMQRLISRGSGLADVGDTVSAVLSDVRMKGDAALREYTKKFDKVE CEEEEEHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEE LANFEVSEEEFEKALSEIGSELLGHLRIAAENIRAFHRAQMPETTWFMELQPGVVLGQKA ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEECCCC TPLESVGAYAPGGRASYPSTVLMTVIPARVAGVEQVIVCTPPRADGSVHPLTLAAAKVAG CCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHCC ADKVFKLGGVQAIGAMAYGTETVPRVDKIVGPGNVFVTSAKMQVRDIAEIDFPAGPSEVL CCHHHHHCCHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCCCCEE IIADESADAAMAASDIIAQAEHDPNAVSVLVTTSETLAEEVEQEVLAQAESTARSEIVKI EEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHEEEE SLENAAVLIADSLDQCIDFSNKFAPEHLEIMVEDSDFVLDRIKNAGSIFIGNYAPVPVGD EECCCEEEEEHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHCCCCCEEECCCCCCCCCC YASGTNHVLPTAGYAKIYSGLNINHFLKYSSIQKISKSGLESLKETVIALAEEEGLKAHA CCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH DSIRARFGYRPSK HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12125824