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The map label for this gene is flaJ [H]

Identifier: 21226514

GI number: 21226514

Start: 523918

End: 525465

Strand: Reverse

Name: flaJ [H]

Synonym: MM_0412

Alternate gene names: 21226514

Gene position: 525465-523918 (Counterclockwise)

Preceding gene: 21226515

Following gene: 21226513

Centisome position: 12.83

GC content: 44.7

Gene sequence:

>1548_bases
ATGGCTCCGTACTTAAAAATAAATTCTGCGAAGCGGGGAGTTGAAGGGTATTTCAGTCTTGCCCGAAAACTGAAGAGCAC
AAAAGTCGTTGAAAGGGTCAATGATGATATGCTCTTCCTGCTGACGTATATGGCAGCTATCTCAACCGCGGATATCGAAA
GGGACAGGATATTCGATTATGCAGGGAGACAGAAGGAATATGAGGCTTCAAAATATTTCTGGCAGATACATATCCTTGCT
TCAAAATGGGGATATGAGTATGCAAAAGCATGCAAGTACATTTCCCAGAAATTAAAGGATGCCTATCTTTCAAAACTGTT
CGGCAGGATGGCAAACATCCTTTCTTCAGGAGAGCCTGAGAAAAATTTCCTCAAACAGGAAAAGATCACAAGGGAAGAGA
TCTATTCCAACGCATACGAAAGGAGCATAGAATCCCTGAAAAAATGGACTGACGGATACACTGCCCTGATGGTTTCCGTA
ACTCTTGTTGTTACCATAATCCTTGTTTCGGTCATGATCTACAATATAGAGAACATAGAAACCATTGCGTTCCTTATTGT
ATTGCTGACTCTCTTCATATGCGGGCTTGCCCTTTACATAATATATAAGGCGGCTCCGGCAGAAAAGAAATTGCATGCCC
TCAGCCGTAAGTCCAGGGAACAGGAAAGGATAAAGTTTCTGAGCCGGGTCCTGCTTCCTCTGGGTGCATTTTCTCTTACT
GTCCTGATTCTGCTCGGAACCAGAAAAGAGTATATCCTGCTTGGAGTTCCGTTCTTTACTCTTCCGATAGGCGTCCTTGC
GGTGGCTGATGACAGAAAAATAGATGAAAGGGACAGCAGTTTTCCTGCATTTATAAAAACTCTGGGAACCCTTGCCGGGA
CAACAGGAATCACTATAAGGAGTGCTATGGAAAACCTCGACCGGGAAACTATAGGCTGTCTCAAGCCAGGAGTCGAAGAA
CTTCACAAAGGCCTTTCCATGGGGTTTAAGTCCAGGCTCTGCTGGGAAAAATTCATAGGCGAAACAGGATCAGAGCTGAT
AAACAGGTCCTCAAGGATCTTTAACGATGCGGTCGAGCTGGGAGGCGATCCCGCTGAAATAGGGAATATAGTTTCAGCTT
CAAGCCTGGCAATCGTCCTGCTCAGGATGAAGAGGCAGCTTGTAAGTTCCGGATTCAAGGGTCTTGCCTTAACCCTTCAT
GCTGTTATGGTCGGGCTTCTTATTTTTGTAATGGAAATAATTTCAAGGTTTAGCGGGCTTGTCTCAAAGATGAGCGAGGC
TTATATGTCCACAGAAGGGAGTATGAACGGGATGTCCGGAATGGGCATGAGCATGTTTAATGTGGCAGAAAGCGTGCCCC
TGCTTTACAAATTCACTTTTTCCGTGATAATTATCCTGACAATTTCAAATACGCTCGTGGTGAAGATTGTAGAAGGAGGA
GGAAATTACAAACTTTTATTCTATGGGGGGCTGATGTCCGGAATTTCAGGGCTCTGCATGATCCTTATCCCTCCGGTAGT
ATCCAGGGTGTTCACATTCCAGATATGA

Upstream 100 bases:

>100_bases
TGAGAAAAATCCACCAGGCAAATATTACGAATTTCTATGACCTGTTTACTACCCTGATCCAGCTTGAGGAAGCGGGGGTA
ATATCATGAATTATGCAGAG

Downstream 100 bases:

>100_bases
ACGGAGTTTTATTCAGAAAAATAAAAATGTGCCTGAAAAAAGTAGTTTATAAAAAAAGTAGTTTATGAAAAGGGAATTTA
TGAAAAAAAGTTTATGAAAA

Product: flagellar assembly protein J

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 515; Mature: 514

Protein sequence:

>515_residues
MAPYLKINSAKRGVEGYFSLARKLKSTKVVERVNDDMLFLLTYMAAISTADIERDRIFDYAGRQKEYEASKYFWQIHILA
SKWGYEYAKACKYISQKLKDAYLSKLFGRMANILSSGEPEKNFLKQEKITREEIYSNAYERSIESLKKWTDGYTALMVSV
TLVVTIILVSVMIYNIENIETIAFLIVLLTLFICGLALYIIYKAAPAEKKLHALSRKSREQERIKFLSRVLLPLGAFSLT
VLILLGTRKEYILLGVPFFTLPIGVLAVADDRKIDERDSSFPAFIKTLGTLAGTTGITIRSAMENLDRETIGCLKPGVEE
LHKGLSMGFKSRLCWEKFIGETGSELINRSSRIFNDAVELGGDPAEIGNIVSASSLAIVLLRMKRQLVSSGFKGLALTLH
AVMVGLLIFVMEIISRFSGLVSKMSEAYMSTEGSMNGMSGMGMSMFNVAESVPLLYKFTFSVIIILTISNTLVVKIVEGG
GNYKLLFYGGLMSGISGLCMILIPPVVSRVFTFQI

Sequences:

>Translated_515_residues
MAPYLKINSAKRGVEGYFSLARKLKSTKVVERVNDDMLFLLTYMAAISTADIERDRIFDYAGRQKEYEASKYFWQIHILA
SKWGYEYAKACKYISQKLKDAYLSKLFGRMANILSSGEPEKNFLKQEKITREEIYSNAYERSIESLKKWTDGYTALMVSV
TLVVTIILVSVMIYNIENIETIAFLIVLLTLFICGLALYIIYKAAPAEKKLHALSRKSREQERIKFLSRVLLPLGAFSLT
VLILLGTRKEYILLGVPFFTLPIGVLAVADDRKIDERDSSFPAFIKTLGTLAGTTGITIRSAMENLDRETIGCLKPGVEE
LHKGLSMGFKSRLCWEKFIGETGSELINRSSRIFNDAVELGGDPAEIGNIVSASSLAIVLLRMKRQLVSSGFKGLALTLH
AVMVGLLIFVMEIISRFSGLVSKMSEAYMSTEGSMNGMSGMGMSMFNVAESVPLLYKFTFSVIIILTISNTLVVKIVEGG
GNYKLLFYGGLMSGISGLCMILIPPVVSRVFTFQI
>Mature_514_residues
APYLKINSAKRGVEGYFSLARKLKSTKVVERVNDDMLFLLTYMAAISTADIERDRIFDYAGRQKEYEASKYFWQIHILAS
KWGYEYAKACKYISQKLKDAYLSKLFGRMANILSSGEPEKNFLKQEKITREEIYSNAYERSIESLKKWTDGYTALMVSVT
LVVTIILVSVMIYNIENIETIAFLIVLLTLFICGLALYIIYKAAPAEKKLHALSRKSREQERIKFLSRVLLPLGAFSLTV
LILLGTRKEYILLGVPFFTLPIGVLAVADDRKIDERDSSFPAFIKTLGTLAGTTGITIRSAMENLDRETIGCLKPGVEEL
HKGLSMGFKSRLCWEKFIGETGSELINRSSRIFNDAVELGGDPAEIGNIVSASSLAIVLLRMKRQLVSSGFKGLALTLHA
VMVGLLIFVMEIISRFSGLVSKMSEAYMSTEGSMNGMSGMGMSMFNVAESVPLLYKFTFSVIIILTISNTLVVKIVEGGG
NYKLLFYGGLMSGISGLCMILIPPVVSRVFTFQI

Specific function: Unknown

COG id: COG1955

COG function: function code NU; Archaeal flagella assembly protein J

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Archaeal flagellum (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1286 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018076 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 57391; Mature: 57259

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPYLKINSAKRGVEGYFSLARKLKSTKVVERVNDDMLFLLTYMAAISTADIERDRIFDY
CCCCEECCCHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHH
AGRQKEYEASKYFWQIHILASKWGYEYAKACKYISQKLKDAYLSKLFGRMANILSSGEPE
CCCCCHHHHHHEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
KNFLKQEKITREEIYSNAYERSIESLKKWTDGYTALMVSVTLVVTIILVSVMIYNIENIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
TIAFLIVLLTLFICGLALYIIYKAAPAEKKLHALSRKSREQERIKFLSRVLLPLGAFSLT
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLILLGTRKEYILLGVPFFTLPIGVLAVADDRKIDERDSSFPAFIKTLGTLAGTTGITIR
HHHHHCCCCCEEEEECCHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHH
SAMENLDRETIGCLKPGVEELHKGLSMGFKSRLCWEKFIGETGSELINRSSRIFNDAVEL
HHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
GGDPAEIGNIVSASSLAIVLLRMKRQLVSSGFKGLALTLHAVMVGLLIFVMEIISRFSGL
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSKMSEAYMSTEGSMNGMSGMGMSMFNVAESVPLLYKFTFSVIIILTISNTLVVKIVEGG
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHEEECCEEEEEEEECC
GNYKLLFYGGLMSGISGLCMILIPPVVSRVFTFQI
CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
APYLKINSAKRGVEGYFSLARKLKSTKVVERVNDDMLFLLTYMAAISTADIERDRIFDY
CCCEECCCHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHH
AGRQKEYEASKYFWQIHILASKWGYEYAKACKYISQKLKDAYLSKLFGRMANILSSGEPE
CCCCCHHHHHHEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
KNFLKQEKITREEIYSNAYERSIESLKKWTDGYTALMVSVTLVVTIILVSVMIYNIENIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
TIAFLIVLLTLFICGLALYIIYKAAPAEKKLHALSRKSREQERIKFLSRVLLPLGAFSLT
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLILLGTRKEYILLGVPFFTLPIGVLAVADDRKIDERDSSFPAFIKTLGTLAGTTGITIR
HHHHHCCCCCEEEEECCHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHH
SAMENLDRETIGCLKPGVEELHKGLSMGFKSRLCWEKFIGETGSELINRSSRIFNDAVEL
HHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
GGDPAEIGNIVSASSLAIVLLRMKRQLVSSGFKGLALTLHAVMVGLLIFVMEIISRFSGL
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSKMSEAYMSTEGSMNGMSGMGMSMFNVAESVPLLYKFTFSVIIILTISNTLVVKIVEGG
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHEEECCEEEEEEEECC
GNYKLLFYGGLMSGISGLCMILIPPVVSRVFTFQI
CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]